2026-07-09T13:53:50,420 Created temporary directory: /tmp/pip-ephem-wheel-cache-wgmb0zot
2026-07-09T13:53:50,422 Created temporary directory: /tmp/pip-build-tracker-c_uruxgb
2026-07-09T13:53:50,423 Initialized build tracking at /tmp/pip-build-tracker-c_uruxgb
2026-07-09T13:53:50,423 Created build tracker: /tmp/pip-build-tracker-c_uruxgb
2026-07-09T13:53:50,423 Entered build tracker: /tmp/pip-build-tracker-c_uruxgb
2026-07-09T13:53:50,424 Created temporary directory: /tmp/pip-wheel-lv2ywgzs
2026-07-09T13:53:50,427 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-07-09T13:53:50,430 Created temporary directory: /tmp/pip-ephem-wheel-cache-g68kbuuo
2026-07-09T13:53:50,453 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-07-09T13:53:50,457 2 location(s) to search for versions of summarizedexperiment:
2026-07-09T13:53:50,457 * https://pypi.org/simple/summarizedexperiment/
2026-07-09T13:53:50,457 * https://www.piwheels.org/simple/summarizedexperiment/
2026-07-09T13:53:50,458 Fetching project page and analyzing links: https://pypi.org/simple/summarizedexperiment/
2026-07-09T13:53:50,458 Getting page https://pypi.org/simple/summarizedexperiment/
2026-07-09T13:53:50,460 Found index url https://pypi.org/simple
2026-07-09T13:53:50,792 Fetched page https://pypi.org/simple/summarizedexperiment/ as application/vnd.pypi.simple.v1+json
2026-07-09T13:53:50,811   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/a6/19/6590a80c2a5a9181756353504f72fb8f4b606166266759ee1c7379f76f0d/SummarizedExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,811   Found link https://files.pythonhosted.org/packages/ef/6e/081bad79f612712b3c17aa19dbbd3b3466ddf96b5bab899bea280fc5e2da/SummarizedExperiment-0.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1
2026-07-09T13:53:50,812   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/35/91/b90860298e56dd9de40a3947ae59a9531a6d01cee7399c284f927877ae95/SummarizedExperiment-0.1.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,813   Found link https://files.pythonhosted.org/packages/72/c6/f86011504cd48a88566ce375a9fdadea2e026511c551fcb6550f9f4bb499/SummarizedExperiment-0.1.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.1
2026-07-09T13:53:50,814   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/93/0d/f63ec4bdb02adb98cdcf0858c1f781cb870b7226137f6a85c99f44adc038/SummarizedExperiment-0.1.2-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,815   Found link https://files.pythonhosted.org/packages/82/6e/4f2f6f9388c4362b78f860106b46c51b9ec92c556b9b893a1567eb7119bc/SummarizedExperiment-0.1.2.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.2
2026-07-09T13:53:50,815   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/da/19/552a0282e766e520214ff3d5dd43486b8a1b658d7e2cc96ce9f1dfcaeb55/SummarizedExperiment-0.1.3-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,816   Found link https://files.pythonhosted.org/packages/1a/78/58d8654c5302fcb0d136903ccab0a1bd8beba8ebb7a2f4bf08e38703d513/SummarizedExperiment-0.1.3.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.3
2026-07-09T13:53:50,817   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/89/b9/f38eaccb2a5a82f928a2745b02abdd28c66d1bb4f8c629ef5bcc3f3a777e/SummarizedExperiment-0.1.4-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,818   Found link https://files.pythonhosted.org/packages/21/f7/9503b1cd2b6b89886ad4e5d49368487fc0bd5930e645c2d3621518d00c2c/SummarizedExperiment-0.1.4.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.4
2026-07-09T13:53:50,819   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/28/17/3f554f9befa211b3b7495035da5f675540e7ed59d8630be9626a58a282ec/SummarizedExperiment-0.1.5-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,819   Found link https://files.pythonhosted.org/packages/e8/fc/64ba3fdb2240310781c12ed6954e02578474f6cc86d6b6a5b74f5dfde178/SummarizedExperiment-0.1.5.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.5
2026-07-09T13:53:50,820   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/77/89/908b3d42a6c67bd670ef4540981cc32257b8b60ed3ea1f6990bc819e14b6/SummarizedExperiment-0.2.0-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,821   Found link https://files.pythonhosted.org/packages/8b/02/b73e448dab09506e2947d5b072055ca87315e0adb9505b7d703bd8c06f91/SummarizedExperiment-0.2.0.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.0
2026-07-09T13:53:50,821   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/3d/36/8ac8791844f66a377cbd0b44d9bf5cb70575bdfa7158fc9655eae33b5939/SummarizedExperiment-0.2.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,822   Found link https://files.pythonhosted.org/packages/cf/81/0d5473ba794d789eafc5ff7a1662c6fbff8fef4142634a30c5f5f3db3016/SummarizedExperiment-0.2.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.1
2026-07-09T13:53:50,822   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/13/4d/b9e3b467dad5d7133cd37d69a5461af557d0ae25753c8a5a6d4e77ea4455/SummarizedExperiment-0.2.2-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,823   Found link https://files.pythonhosted.org/packages/8a/a2/bef90a7f21c287b22a6d6dc67009a9caaf247c83bbf7a1400a026e9d949a/SummarizedExperiment-0.2.2.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.2
2026-07-09T13:53:50,824   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/b1/d3/091392160d7c2932f56461e2f8e22dde97a63f43842905d802f146ac3be0/SummarizedExperiment-0.2.3-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,825   Found link https://files.pythonhosted.org/packages/e8/06/421183afbcc3e1d4a02e6824b936b6a4e9a125374a1e02a9dbd45e2a0e1d/SummarizedExperiment-0.2.3.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.3
2026-07-09T13:53:50,825   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/4f/46/4e11b15d698b31f479e5199f0069b29a7da4054a98e013c6878394998f2a/SummarizedExperiment-0.2.4-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,826   Found link https://files.pythonhosted.org/packages/39/be/664db28bb7f976aecd129e7b34d7a0dea293d4c3ab779f020ad463f04d92/SummarizedExperiment-0.2.4.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.4
2026-07-09T13:53:50,827   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/25/0d/baa5ec0285631eb49c6553fa6d75cc70ef605a43a666e3ec0f2ffe3111a4/SummarizedExperiment-0.2.5-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,827   Found link https://files.pythonhosted.org/packages/e7/a6/919e06e8b8c97f298f962e6d415a1b11bcca77b5c5b5077d382f57e80a9a/SummarizedExperiment-0.2.5.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.5
2026-07-09T13:53:50,828   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/f3/91/7c70b63e68e5989d51c576cea5ee1a6c0a3dead8fab2ffba772d9136d68b/SummarizedExperiment-0.2.6-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,829   Found link https://files.pythonhosted.org/packages/5d/27/560249421386d62b63a024bec1d63bf8cca94dc81da392f9dcc5fcfcbed6/SummarizedExperiment-0.2.6.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.6
2026-07-09T13:53:50,830   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/5d/e0/9f0d23e9f8c40c6469ba0ea56582448cb7d31b6d9e640cd78ec1bd7c94ee/SummarizedExperiment-0.2.7-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,830   Found link https://files.pythonhosted.org/packages/7b/a5/4d98cb105ca3171b2f2e071f273b57bf6ea30028319f0b14a22d3dec99aa/SummarizedExperiment-0.2.7.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.7
2026-07-09T13:53:50,831   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/2f/a2/59e3669df5408b58601bc43c312d53c830b73828e34b1aa99d7b1969e62b/SummarizedExperiment-0.2.8-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,831   Found link https://files.pythonhosted.org/packages/a4/45/cd7ec2990324886dec57d59b931bb959da2465059d544b06ac1a2f45a44c/SummarizedExperiment-0.2.8.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.8
2026-07-09T13:53:50,832   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/06/12/4c2d0a7ed8d4849d2a3d2fdf11debaa3dad9d15490618c189242b81813dd/SummarizedExperiment-0.2.9-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,832   Found link https://files.pythonhosted.org/packages/f9/8f/775435fe16978ae4f67af1b5bfe705ccb02b0735bee422e68b8012fb4306/SummarizedExperiment-0.2.9.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.9
2026-07-09T13:53:50,833   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/77/58/9606e137c3cb8447718cc09a3471cf43dd6ff66e68f27e85e8b1fc4f3e7e/SummarizedExperiment-0.2.10-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,834   Found link https://files.pythonhosted.org/packages/5d/e4/61b6db71081a9a0775d43046388854480d648b4892e098a50c67c28ef7f7/SummarizedExperiment-0.2.10.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.10
2026-07-09T13:53:50,835   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/d8/c7/89ad697b35e9a3f66adab758e0e937d042ee8406b7174c1befb6eed615ef/SummarizedExperiment-0.2.11-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,836   Found link https://files.pythonhosted.org/packages/e3/9b/f75b9e57643d4d7a026dbacad30c6e4e95f117398006626551451902ba4d/SummarizedExperiment-0.2.11.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.11
2026-07-09T13:53:50,837   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/18/6b/f1e0e2084496d217a2eefbced504d41e96fe37d8e41c0bce7c69f3d598b9/SummarizedExperiment-0.2.12-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,837   Found link https://files.pythonhosted.org/packages/cc/e7/4b044aa7e5599b4ce93ecba39a69bfeafa6c5d1145ae881d05bf387d17e3/SummarizedExperiment-0.2.12.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.12
2026-07-09T13:53:50,838   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/bc/c0/cd2d170d003272a5c79707e17699488ac147e6e73dea107fd0e4eca155ea/SummarizedExperiment-0.2.13-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,839   Found link https://files.pythonhosted.org/packages/5f/72/78bcfbb13d8e94dd590ea9b762ef71329fe368eed8b41d5a2393a7003006/SummarizedExperiment-0.2.13.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.13
2026-07-09T13:53:50,840   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/51/88/5264e72fbcc86c45c35cb012215fd6595cea0fac1b055c64bf2863e333c4/SummarizedExperiment-0.2.14-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,840   Found link https://files.pythonhosted.org/packages/d7/d5/bec669b339f0331570a9edf93eda11f341b14b0fe5f99051192ec49ca092/SummarizedExperiment-0.2.14.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.2.14
2026-07-09T13:53:50,841   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/bd/ab/a83583bb995a228c10e8ec911382931097e94fcbd2d2a3e4420510ebdc0f/SummarizedExperiment-0.3.0-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,842   Found link https://files.pythonhosted.org/packages/bf/b8/e8bd18365325d549bcf0c837eec5ad32eafa85c6492c7e4d81c233db797a/SummarizedExperiment-0.3.0.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.3.0
2026-07-09T13:53:50,842   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/20/80/c0674301a0a6f7f13751590fb2dec06fc3eb07ee77e744f5ff4ddf369665/SummarizedExperiment-0.3.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,843   Found link https://files.pythonhosted.org/packages/75/60/6b85f4b6036a9a90def92a1eaa242cb8e7de0a0d0011b2c30c4bce5d9189/SummarizedExperiment-0.3.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.3.1
2026-07-09T13:53:50,844   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/80/e2/b067d4c803506a823f6dca41f2cf8603d2ca20d9e4a3ac620937cd1f4063/SummarizedExperiment-0.3.2-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
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2026-07-09T13:53:50,846   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/f4/69/5b6610a0d4754af4f637b1c439c96cc21052badf20fd98696f8c4a0c3fed/SummarizedExperiment-0.3.3-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
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2026-07-09T13:53:50,847   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/e6/4c/d2b42f150a8cf4595dd756812f69b416e6cdfa49d551bad1f510b87e1fe2/SummarizedExperiment-0.3.4-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,848   Found link https://files.pythonhosted.org/packages/01/fc/07a3d27d8e1a94182770341329facb288798aeb7c0c9f48dbd3583a768ee/SummarizedExperiment-0.3.4.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.3.4
2026-07-09T13:53:50,848   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/31/6a/34fa946dc48f0e5afab092c063f10dc4bb810227c60f3099f5c72722ac06/SummarizedExperiment-0.3.5-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,849   Found link https://files.pythonhosted.org/packages/1a/05/a4d7951d4335ceb1c28cc009e702a9a091d72028bc4a0ecb40126b0daac3/SummarizedExperiment-0.3.5.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.3.5
2026-07-09T13:53:50,850   Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/24/dc/9803692b8e81c2e2d4767cd2c0bfbd7cb3c4f7ca68051e012b7346df9bf3/SummarizedExperiment-0.3.6-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/)
2026-07-09T13:53:50,850   Found link https://files.pythonhosted.org/packages/1e/70/2fadcd27e08e43e322c581d28f23e73a4514c02f15500b9a5eef2449efa5/SummarizedExperiment-0.3.6.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.3.6
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2026-07-09T13:53:50,853   Found link https://files.pythonhosted.org/packages/64/b0/cdcfbb76a09c2ec053c028b6cb59266cafd06b6e0751f698ee321b5a9951/SummarizedExperiment-0.4.0.tar.gz (from https://pypi.org/simple/summarizedexperiment/) (requires-python:>=3.8), version: 0.4.0
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2026-07-09T13:53:51,250   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.14-py3-none-any.whl#sha256=c0d2121a8989ad15e5244e966a1ba3e3b07331bda02e82e6778e8afd091fe7e0 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,250   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.13-py3-none-any.whl#sha256=a0305c779b0ce48efc731b424b29e243184ca07c1c41fbe042858b3eed9799e3 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,251   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.12-py3-none-any.whl#sha256=abddbf6a93ec75ce8b9031bfbef51e69449420e6d2db0a0333ec2b00854d4529 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,251   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.11-py3-none-any.whl#sha256=3ab415a3c10e7ecfde74dc2c5c4dc623337e0a873d7931a2d32309c276cadd16 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,252   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.10-py3-none-any.whl#sha256=1d7ec2f501bdb617de684c7fe77cedb26b491d41e632d795934eff4752f60077 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,252   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.9-py3-none-any.whl#sha256=8dd62e8927ba49172a96c552dcdafe35ee57cc197059f04af77254b938fcf343 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,253   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.8-py3-none-any.whl#sha256=2c0167c4b2ab4986505343d4692890328ad87731d364f4d2562cfb2dcbddd479 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,254   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.7-py3-none-any.whl#sha256=4663a7ad9a4718b88e87b4a49c605f09455c20729a025a8d59ba62c59dab02c2 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,254   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.6-py3-none-any.whl#sha256=ad5f9dccf70a45931ba64c94a4647e2a7480214133dcc33394da5adbb4db3b80 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,255   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.5-py3-none-any.whl#sha256=a651a6464de09f7792360f471a462c2750fece9c42e5a5fb6b4a25afac742655 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,255   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.4-py3-none-any.whl#sha256=5ff1d0e6dca73bf53829ef7937954b5ddda6238b95f3497807e2258a056d9e8a (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,256   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.3-py3-none-any.whl#sha256=dcbe4aab354457a7d218b38d3919f1ed141455f6079dbd8ee2ebf509202377ff (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,257   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.2-py3-none-any.whl#sha256=37478d58d8459976fc6f34e72808f7aebeaf89bf0b8fbe0323406e0cda16ec52 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,257   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.1-py3-none-any.whl#sha256=4dedea7af7c50e6e556fae593cb96c3a79928d08e704c6ccb264bc2dc911603a (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,257   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.2.0-py3-none-any.whl#sha256=30e8be4a090aac1c92bd9fe832dbc9386cb7e879485c8aed5e6f1351ea0f1d86 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,258   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.5-py3-none-any.whl#sha256=98cd322b00546c919b653eef6202ab18a1fa115b5c6c3d31b405ff642442c204 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,258   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.4-py3-none-any.whl#sha256=37a07d9cd9ee1b99eae1c2a7232abfdc43ef82366e1ce76f7ae4b13715ac15c8 (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,259   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.3-py3-none-any.whl#sha256=abc974e9e1e0e4c1cffd35fbde6a79f614e7e1ccf6e48feb8377d646dc76aecf (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,260   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.2-py3-none-any.whl#sha256=16c48d15bf4940c95f83e1f89115a6ffc35b18021a931913cf2a5e17ea8364dd (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,260   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.1-py3-none-any.whl#sha256=f34793c0d8e2ce59476b655b6d0eec21f705d0856700daa0e1931726164d6cbf (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,261   Skipping link: No binaries permitted for summarizedexperiment: https://archive1.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1-py3-none-any.whl#sha256=5b303c6b659de5c38ed7e7b773cb18836a33e0aced12ef6e1e62d3434e481f2f (from https://www.piwheels.org/simple/summarizedexperiment/)
2026-07-09T13:53:51,261 Skipping link: not a file: https://www.piwheels.org/simple/summarizedexperiment/
2026-07-09T13:53:51,262 Skipping link: not a file: https://pypi.org/simple/summarizedexperiment/
2026-07-09T13:53:51,287 Given no hashes to check 1 links for project 'summarizedexperiment': discarding no candidates
2026-07-09T13:53:51,306 Collecting summarizedexperiment==0.7.0
2026-07-09T13:53:51,308   Created temporary directory: /tmp/pip-unpack-s2nogq8r
2026-07-09T13:53:51,557   Downloading summarizedexperiment-0.7.0.tar.gz (1.0 MB)
2026-07-09T13:53:51,898   Added summarizedexperiment==0.7.0 from https://files.pythonhosted.org/packages/20/98/b1b7782d1ad55ff56d083e57184079daa80ea513f29d5f5f7b471e6fecd6/summarizedexperiment-0.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-c_uruxgb'
2026-07-09T13:53:51,904   Created temporary directory: /tmp/pip-build-env-oyu3zdo8
2026-07-09T13:53:51,908   Installing build dependencies: started
2026-07-09T13:53:51,910   Running command pip subprocess to install build dependencies
2026-07-09T13:53:53,064   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-07-09T13:53:53,475   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-07-09T13:53:53,498   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-07-09T13:53:55,529   Collecting setuptools>=46.1.0
2026-07-09T13:53:55,531     Obtaining dependency information for setuptools>=46.1.0 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata
2026-07-09T13:53:55,545     Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-07-09T13:53:55,925   Collecting setuptools_scm[toml]>=5
2026-07-09T13:53:55,926     Obtaining dependency information for setuptools_scm[toml]>=5 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl.metadata
2026-07-09T13:53:55,940     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl.metadata (6.6 kB)
2026-07-09T13:53:55,950   Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl#sha256=aea276de3de0e7db4e236bb9e5a53d6c9a6dddf092f72d3b6b14f6c8c0620c3c (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=5 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl#sha256=aea276de3de0e7db4e236bb9e5a53d6c9a6dddf092f72d3b6b14f6c8c0620c3c has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm'
2026-07-09T13:53:55,974     Using cached setuptools_scm-10.2.0-py3-none-any.whl (27 kB)
2026-07-09T13:53:56,206   Collecting wheel
2026-07-09T13:53:56,207     Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata
2026-07-09T13:53:56,221     Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
2026-07-09T13:53:56,327   Collecting vcs-versioning<3,>=2.0.0.dev0
2026-07-09T13:53:56,328     Obtaining dependency information for vcs-versioning<3,>=2.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl.metadata
2026-07-09T13:53:56,341     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl.metadata (1.7 kB)
2026-07-09T13:53:56,525   Collecting packaging>=20
2026-07-09T13:53:56,526     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-07-09T13:53:56,540     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-07-09T13:53:56,789   Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB)
2026-07-09T13:53:56,808   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-07-09T13:53:56,831   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl (108 kB)
2026-07-09T13:53:56,908   Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB)
2026-07-09T13:53:56,947   Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB)
2026-07-09T13:53:56,972   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-07-09T13:53:57,005   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl (108 kB)
2026-07-09T13:53:57,111   Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB)
2026-07-09T13:53:59,947   Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm
2026-07-09T13:54:03,374     Creating /tmp/pip-build-env-oyu3zdo8/overlay/local/bin
2026-07-09T13:54:03,376     changing mode of /tmp/pip-build-env-oyu3zdo8/overlay/local/bin/wheel to 755
2026-07-09T13:54:03,774     changing mode of /tmp/pip-build-env-oyu3zdo8/overlay/local/bin/vcs-versioning to 755
2026-07-09T13:54:03,906     changing mode of /tmp/pip-build-env-oyu3zdo8/overlay/local/bin/setuptools-scm to 755
2026-07-09T13:54:03,939   Successfully installed packaging-26.2 setuptools-83.0.0 setuptools_scm-10.2.0 vcs-versioning-2.2.2 wheel-0.47.0
2026-07-09T13:54:04,245   Installing build dependencies: finished with status 'done'
2026-07-09T13:54:04,251   Getting requirements to build wheel: started
2026-07-09T13:54:04,253   Running command Getting requirements to build wheel
2026-07-09T13:54:05,005   /tmp/pip-build-env-oyu3zdo8/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:218: UserWarning: version of SummarizedExperiment already set
2026-07-09T13:54:05,005     warnings.warn(f"version of {self.dist_name} already set")
2026-07-09T13:54:05,015   running egg_info
2026-07-09T13:54:05,024   writing src/SummarizedExperiment.egg-info/PKG-INFO
2026-07-09T13:54:05,029   writing dependency_links to src/SummarizedExperiment.egg-info/dependency_links.txt
2026-07-09T13:54:05,033   writing requirements to src/SummarizedExperiment.egg-info/requires.txt
2026-07-09T13:54:05,034   writing top-level names to src/SummarizedExperiment.egg-info/top_level.txt
2026-07-09T13:54:05,080   listing git files failed - pretending there aren't any
2026-07-09T13:54:05,089   reading manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:05,097   adding license file 'LICENSE.txt'
2026-07-09T13:54:05,101   writing manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:05,204   Getting requirements to build wheel: finished with status 'done'
2026-07-09T13:54:05,208   Created temporary directory: /tmp/pip-modern-metadata-2uegu5c5
2026-07-09T13:54:05,210   Preparing metadata (pyproject.toml): started
2026-07-09T13:54:05,211   Running command Preparing metadata (pyproject.toml)
2026-07-09T13:54:05,877   /tmp/pip-build-env-oyu3zdo8/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:218: UserWarning: version of SummarizedExperiment already set
2026-07-09T13:54:05,877     warnings.warn(f"version of {self.dist_name} already set")
2026-07-09T13:54:05,900   running dist_info
2026-07-09T13:54:05,902   creating /tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info
2026-07-09T13:54:05,910   writing /tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/PKG-INFO
2026-07-09T13:54:05,916   writing dependency_links to /tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/dependency_links.txt
2026-07-09T13:54:05,919   writing requirements to /tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/requires.txt
2026-07-09T13:54:05,920   writing top-level names to /tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/top_level.txt
2026-07-09T13:54:05,922   writing manifest file '/tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:05,963   listing git files failed - pretending there aren't any
2026-07-09T13:54:05,970   reading manifest file '/tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:05,972   adding license file 'LICENSE.txt'
2026-07-09T13:54:05,976   writing manifest file '/tmp/pip-modern-metadata-2uegu5c5/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:05,977   creating '/tmp/pip-modern-metadata-2uegu5c5/summarizedexperiment-0.7.0.dist-info'
2026-07-09T13:54:06,112   Preparing metadata (pyproject.toml): finished with status 'done'
2026-07-09T13:54:06,118   Source in /tmp/pip-wheel-lv2ywgzs/summarizedexperiment_888f334d99c442d09de2de028ea46b7a has version 0.7.0, which satisfies requirement summarizedexperiment==0.7.0 from https://files.pythonhosted.org/packages/20/98/b1b7782d1ad55ff56d083e57184079daa80ea513f29d5f5f7b471e6fecd6/summarizedexperiment-0.7.0.tar.gz
2026-07-09T13:54:06,119   Removed summarizedexperiment==0.7.0 from https://files.pythonhosted.org/packages/20/98/b1b7782d1ad55ff56d083e57184079daa80ea513f29d5f5f7b471e6fecd6/summarizedexperiment-0.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-c_uruxgb'
2026-07-09T13:54:06,125 Created temporary directory: /tmp/pip-unpack-untlm4m8
2026-07-09T13:54:06,125 Building wheels for collected packages: summarizedexperiment
2026-07-09T13:54:06,129   Created temporary directory: /tmp/pip-wheel-svx8t_3k
2026-07-09T13:54:06,130   Destination directory: /tmp/pip-wheel-svx8t_3k
2026-07-09T13:54:06,132   Building wheel for summarizedexperiment (pyproject.toml): started
2026-07-09T13:54:06,133   Running command Building wheel for summarizedexperiment (pyproject.toml)
2026-07-09T13:54:06,791   /tmp/pip-build-env-oyu3zdo8/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:218: UserWarning: version of SummarizedExperiment already set
2026-07-09T13:54:06,791     warnings.warn(f"version of {self.dist_name} already set")
2026-07-09T13:54:06,815   running bdist_wheel
2026-07-09T13:54:06,850   running build
2026-07-09T13:54:06,850   running build_py
2026-07-09T13:54:06,852   creating build/lib/summarizedexperiment
2026-07-09T13:54:06,855   copying src/summarizedexperiment/base.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,858   copying src/summarizedexperiment/SummarizedExperiment.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,861   copying src/summarizedexperiment/_combineutils.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,863   copying src/summarizedexperiment/type_checks.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,865   copying src/summarizedexperiment/_frameutils.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,866   copying src/summarizedexperiment/__init__.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,868   copying src/summarizedexperiment/RangedSummarizedExperiment.py -> build/lib/summarizedexperiment
2026-07-09T13:54:06,871   running egg_info
2026-07-09T13:54:06,878   writing src/SummarizedExperiment.egg-info/PKG-INFO
2026-07-09T13:54:06,884   writing dependency_links to src/SummarizedExperiment.egg-info/dependency_links.txt
2026-07-09T13:54:06,886   writing requirements to src/SummarizedExperiment.egg-info/requires.txt
2026-07-09T13:54:06,888   writing top-level names to src/SummarizedExperiment.egg-info/top_level.txt
2026-07-09T13:54:06,919   listing git files failed - pretending there aren't any
2026-07-09T13:54:06,926   reading manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:06,930   adding license file 'LICENSE.txt'
2026-07-09T13:54:06,935   writing manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt'
2026-07-09T13:54:06,954   installing to build/bdist.linux-armv7l/wheel
2026-07-09T13:54:06,954   running install
2026-07-09T13:54:06,977   running install_lib
2026-07-09T13:54:06,987   creating build/bdist.linux-armv7l/wheel
2026-07-09T13:54:06,989   creating build/bdist.linux-armv7l/wheel/summarizedexperiment
2026-07-09T13:54:06,990   copying build/lib/summarizedexperiment/base.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:06,994   copying build/lib/summarizedexperiment/SummarizedExperiment.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:06,996   copying build/lib/summarizedexperiment/_combineutils.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:06,998   copying build/lib/summarizedexperiment/type_checks.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:07,000   copying build/lib/summarizedexperiment/_frameutils.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:07,002   copying build/lib/summarizedexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:07,003   copying build/lib/summarizedexperiment/RangedSummarizedExperiment.py -> build/bdist.linux-armv7l/wheel/./summarizedexperiment
2026-07-09T13:54:07,006   running install_egg_info
2026-07-09T13:54:07,020   Copying src/SummarizedExperiment.egg-info to build/bdist.linux-armv7l/wheel/./SummarizedExperiment-0.7.0-py3.11.egg-info
2026-07-09T13:54:07,036   running install_scripts
2026-07-09T13:54:07,047   creating build/bdist.linux-armv7l/wheel/summarizedexperiment-0.7.0.dist-info/WHEEL
2026-07-09T13:54:07,050   creating '/tmp/pip-wheel-svx8t_3k/.tmp-azu2szob/summarizedexperiment-0.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-07-09T13:54:07,055   adding 'summarizedexperiment/RangedSummarizedExperiment.py'
2026-07-09T13:54:07,057   adding 'summarizedexperiment/SummarizedExperiment.py'
2026-07-09T13:54:07,059   adding 'summarizedexperiment/__init__.py'
2026-07-09T13:54:07,060   adding 'summarizedexperiment/_combineutils.py'
2026-07-09T13:54:07,061   adding 'summarizedexperiment/_frameutils.py'
2026-07-09T13:54:07,066   adding 'summarizedexperiment/base.py'
2026-07-09T13:54:07,068   adding 'summarizedexperiment/type_checks.py'
2026-07-09T13:54:07,070   adding 'summarizedexperiment-0.7.0.dist-info/licenses/LICENSE.txt'
2026-07-09T13:54:07,072   adding 'summarizedexperiment-0.7.0.dist-info/METADATA'
2026-07-09T13:54:07,073   adding 'summarizedexperiment-0.7.0.dist-info/WHEEL'
2026-07-09T13:54:07,074   adding 'summarizedexperiment-0.7.0.dist-info/top_level.txt'
2026-07-09T13:54:07,074   adding 'summarizedexperiment-0.7.0.dist-info/RECORD'
2026-07-09T13:54:07,076   removing build/bdist.linux-armv7l/wheel
2026-07-09T13:54:07,183   Building wheel for summarizedexperiment (pyproject.toml): finished with status 'done'
2026-07-09T13:54:07,189   Created wheel for summarizedexperiment: filename=summarizedexperiment-0.7.0-py3-none-any.whl size=23170 sha256=817c5f39f1e067b4fd2d5043a90221dea26987041ca11a640036e6593ed9ae36
2026-07-09T13:54:07,190   Stored in directory: /tmp/pip-ephem-wheel-cache-g68kbuuo/wheels/10/7d/b3/4115228118be72db2303fa09cf1c87ffc874d4555406d75e04
2026-07-09T13:54:07,200 Successfully built summarizedexperiment
2026-07-09T13:54:07,205 Removed build tracker: '/tmp/pip-build-tracker-c_uruxgb'