2026-07-13T21:06:01,237 Created temporary directory: /tmp/pip-ephem-wheel-cache-uoa5_12l 2026-07-13T21:06:01,239 Created temporary directory: /tmp/pip-build-tracker-s73jtmhl 2026-07-13T21:06:01,240 Initialized build tracking at /tmp/pip-build-tracker-s73jtmhl 2026-07-13T21:06:01,240 Created build tracker: /tmp/pip-build-tracker-s73jtmhl 2026-07-13T21:06:01,240 Entered build tracker: /tmp/pip-build-tracker-s73jtmhl 2026-07-13T21:06:01,241 Created temporary directory: /tmp/pip-wheel-pl_1aci0 2026-07-13T21:06:01,244 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-13T21:06:01,246 Created temporary directory: /tmp/pip-ephem-wheel-cache-agxxwatu 2026-07-13T21:06:01,273 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-13T21:06:01,277 2 location(s) to search for versions of prodec: 2026-07-13T21:06:01,277 * https://pypi.org/simple/prodec/ 2026-07-13T21:06:01,277 * https://www.piwheels.org/simple/prodec/ 2026-07-13T21:06:01,277 Fetching project page and analyzing links: https://pypi.org/simple/prodec/ 2026-07-13T21:06:01,278 Getting page https://pypi.org/simple/prodec/ 2026-07-13T21:06:01,280 Found index url https://pypi.org/simple 2026-07-13T21:06:01,610 Fetched page https://pypi.org/simple/prodec/ as application/vnd.pypi.simple.v1+json 2026-07-13T21:06:01,615 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/6a/e0/8d8fb920d0316db62e109966b98d045b4bae95dab434d30c0fcfc2ceda02/prodec-1.0.1-1-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,616 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/64/f7/bf140a0446e72abef6f8efdd8791a11d6abd774c1ba3cd48d7c178f67e7a/prodec-1.0.1-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,616 Found link https://files.pythonhosted.org/packages/f3/20/66027f6bb8cf9f180c0b6c6082c79d15c8c0c15a126219302e55716d4f4e/prodec-1.0.1.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.1 2026-07-13T21:06:01,617 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/f1/41/2bee0fa94ec54babaa17bbbc75cf7cbd0077197e3917a02e297314136e3f/prodec-1.0.1.post2-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,618 Found link https://files.pythonhosted.org/packages/8d/7f/30630b9bbec9af63a98f40c38aecccc9001c0b8d6c35fc2a6948a1cde6b6/prodec-1.0.1.post2.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.1.post2 2026-07-13T21:06:01,618 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/9d/f4/1d6f00e0ccb5ddb89ed50aaca00aee6b98a2c8807fc6ba303948a63a573d/prodec-1.0.1.post3-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,619 Found link https://files.pythonhosted.org/packages/4a/14/126ac93ab2d1711119f5e348813e55e5ad0d5dfe9a75f75f7a28ef7c4e81/prodec-1.0.1.post3.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.1.post3 2026-07-13T21:06:01,619 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/08/fc/0f6bf4418dbbab7f603e5dbd5de61a0c9ef9ee0d359de923e31cc979b027/prodec-1.0.2-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,620 Found link https://files.pythonhosted.org/packages/f2/e6/d202bbac6436b1659ba42a60727a7dbdd83a8347020fdac12f2059d37062/prodec-1.0.2.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2 2026-07-13T21:06:01,621 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/b6/20/f754e807485f105cce01995c7b15e1e4b45d7062193f90dcd813e5cd3a1d/prodec-1.0.2.post1-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,621 Found link https://files.pythonhosted.org/packages/77/09/e1854b5913557e18c0b6682da3413dd413e38438856b1eba14d2a5245fc6/prodec-1.0.2.post1.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2.post1 2026-07-13T21:06:01,622 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/9a/61/c1e8d1953a1cbb77d9ac254120caf2151b841757ea96027e7302dcf8a796/prodec-1.0.2.post2-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,623 Found link https://files.pythonhosted.org/packages/ac/34/58e403d7d8c4302d3ff6421b774c357dad4fbdf12747fa7c49a807e7e401/prodec-1.0.2.post2.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2.post2 2026-07-13T21:06:01,623 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/6b/ab/6f5f98269b6bc952c729b8cb619ad5fe21b7f7e3ad29b11f2d386ee84599/prodec-1.0.2.post3-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,624 Found link https://files.pythonhosted.org/packages/9c/81/59c5894d7be477609cb59c0fb5d13cd18940099ac5f6894605e3a135a3b3/prodec-1.0.2.post3.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2.post3 2026-07-13T21:06:01,624 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/3e/29/5633fafa18d6a2c8d92c47ce17f2060fa3435f07c830f5aecedc1f503957/prodec-1.0.2.post4-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,625 Found link https://files.pythonhosted.org/packages/a1/89/104fed0ca3d03f2f5b44c3ce28f942702803e85f8800a12f78f8c0c66019/prodec-1.0.2.post4.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2.post4 2026-07-13T21:06:01,625 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/5e/27/0838ad72a26a1f2e712914527d1592f20d90828d1d51ace6a406156d364e/prodec-1.0.2.post5-py3-none-any.whl (from https://pypi.org/simple/prodec/) 2026-07-13T21:06:01,626 Found link https://files.pythonhosted.org/packages/7f/93/634637a27d8006a7c674b573e4226aed7a22be24f5e1b9b906837bf95f9f/prodec-1.0.2.post5.tar.gz (from https://pypi.org/simple/prodec/), version: 1.0.2.post5 2026-07-13T21:06:01,626 Skipping link: No binaries permitted for prodec: https://files.pythonhosted.org/packages/23/36/cb0db8317176de1fec5c66a0399eb82f5c56d582443c696e7f8509e68bff/prodec-1.1.0-py3-none-any.whl (from https://pypi.org/simple/prodec/) (requires-python:>=3.11) 2026-07-13T21:06:01,627 Found link https://files.pythonhosted.org/packages/3f/7e/b546b070f40abe84d8c6c011b7b5499be334feefa10fbb826daf5e508623/prodec-1.1.0.tar.gz (from https://pypi.org/simple/prodec/) (requires-python:>=3.11), version: 1.1.0 2026-07-13T21:06:01,628 Fetching project page and analyzing links: https://www.piwheels.org/simple/prodec/ 2026-07-13T21:06:01,629 Getting page https://www.piwheels.org/simple/prodec/ 2026-07-13T21:06:01,630 Found index url https://www.piwheels.org/simple 2026-07-13T21:06:01,968 Fetched page https://www.piwheels.org/simple/prodec/ as text/html 2026-07-13T21:06:01,972 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2.post5-py3-none-any.whl#sha256=0f64a4b7c64a091b7ebd582289ad6413adb7f2da1603706aa8d83540ba715b39 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,972 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2.post4-py3-none-any.whl#sha256=bc76783d4df2c301a0657a41b98d76d2c36552d34e13ade9a158b9cea46da920 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,973 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2.post3-py3-none-any.whl#sha256=c9e4192f2ea2f2d098df05eb83f02f763f84fd7e7b47cdde8a2056f33b681379 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,974 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2.post2-py3-none-any.whl#sha256=7d576182fd2f9b504084377f0bea020ef8093525f5e1d18b5dc9f72f1d2605e3 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,974 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2.post1-py3-none-any.whl#sha256=74d27ee4eaad899abb7228148d330cbff900f259eac2b4c33bfb60f4c4938911 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,975 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.2-py3-none-any.whl#sha256=af7ca645b41d059fe122f339a74ad7f60725f9dd23d62b8992a2001ac54d4079 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,975 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.1.post3-py3-none-any.whl#sha256=a1b6a8f454c22a823662ae216a72b5121e9a61f9a3f7ec1917cf045efb3299f3 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,976 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.1.post2-py3-none-any.whl#sha256=b95cc298da8869e22d69fd45ebcd7eee9e77667e174da99a27bb091494baf980 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,976 Skipping link: No binaries permitted for prodec: https://archive1.piwheels.org/simple/prodec/prodec-1.0.1-py3-none-any.whl#sha256=4b377c7f953b0f1170dd53fec2423b6e6988aa51892ca8a2e3856c13ef0fa917 (from https://www.piwheels.org/simple/prodec/) 2026-07-13T21:06:01,977 Skipping link: not a file: https://www.piwheels.org/simple/prodec/ 2026-07-13T21:06:01,977 Skipping link: not a file: https://pypi.org/simple/prodec/ 2026-07-13T21:06:01,998 Given no hashes to check 1 links for project 'prodec': discarding no candidates 2026-07-13T21:06:02,017 Collecting prodec==1.1.0 2026-07-13T21:06:02,019 Created temporary directory: /tmp/pip-unpack-smjmj4ix 2026-07-13T21:06:02,344 Downloading prodec-1.1.0.tar.gz (54 kB) 2026-07-13T21:06:02,494 Added prodec==1.1.0 from https://files.pythonhosted.org/packages/3f/7e/b546b070f40abe84d8c6c011b7b5499be334feefa10fbb826daf5e508623/prodec-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-s73jtmhl' 2026-07-13T21:06:02,500 Created temporary directory: /tmp/pip-build-env-8sz4vug_ 2026-07-13T21:06:02,504 Installing build dependencies: started 2026-07-13T21:06:02,506 Running command pip subprocess to install build dependencies 2026-07-13T21:06:03,845 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-07-13T21:06:04,304 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-13T21:06:04,326 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-13T21:06:06,303 Collecting setuptools>=77 2026-07-13T21:06:06,304 Obtaining dependency information for setuptools>=77 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata 2026-07-13T21:06:06,319 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-07-13T21:06:06,589 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-13T21:06:06,698 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-13T21:06:09,447 Installing collected packages: setuptools 2026-07-13T21:06:12,512 Successfully installed setuptools-83.0.0 2026-07-13T21:06:12,781 Installing build dependencies: finished with status 'done' 2026-07-13T21:06:12,788 Getting requirements to build wheel: started 2026-07-13T21:06:12,789 Running command Getting requirements to build wheel 2026-07-13T21:06:13,466 running egg_info 2026-07-13T21:06:13,471 writing src/prodec.egg-info/PKG-INFO 2026-07-13T21:06:13,475 writing dependency_links to src/prodec.egg-info/dependency_links.txt 2026-07-13T21:06:13,478 writing requirements to src/prodec.egg-info/requires.txt 2026-07-13T21:06:13,479 writing top-level names to src/prodec.egg-info/top_level.txt 2026-07-13T21:06:13,499 reading manifest file 'src/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:13,501 adding license file 'LICENSE' 2026-07-13T21:06:13,504 writing manifest file 'src/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:13,601 Getting requirements to build wheel: finished with status 'done' 2026-07-13T21:06:13,604 Created temporary directory: /tmp/pip-modern-metadata-sdjc58xi 2026-07-13T21:06:13,606 Preparing metadata (pyproject.toml): started 2026-07-13T21:06:13,608 Running command Preparing metadata (pyproject.toml) 2026-07-13T21:06:14,244 running dist_info 2026-07-13T21:06:14,254 creating /tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info 2026-07-13T21:06:14,255 writing /tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/PKG-INFO 2026-07-13T21:06:14,259 writing dependency_links to /tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/dependency_links.txt 2026-07-13T21:06:14,262 writing requirements to /tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/requires.txt 2026-07-13T21:06:14,263 writing top-level names to /tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/top_level.txt 2026-07-13T21:06:14,264 writing manifest file '/tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:14,282 reading manifest file '/tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:14,284 adding license file 'LICENSE' 2026-07-13T21:06:14,286 writing manifest file '/tmp/pip-modern-metadata-sdjc58xi/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:14,288 creating '/tmp/pip-modern-metadata-sdjc58xi/prodec-1.1.0.dist-info' 2026-07-13T21:06:14,406 Preparing metadata (pyproject.toml): finished with status 'done' 2026-07-13T21:06:14,411 Source in /tmp/pip-wheel-pl_1aci0/prodec_761bd67ab7694782b7f35337c80e8b43 has version 1.1.0, which satisfies requirement prodec==1.1.0 from https://files.pythonhosted.org/packages/3f/7e/b546b070f40abe84d8c6c011b7b5499be334feefa10fbb826daf5e508623/prodec-1.1.0.tar.gz 2026-07-13T21:06:14,412 Removed prodec==1.1.0 from https://files.pythonhosted.org/packages/3f/7e/b546b070f40abe84d8c6c011b7b5499be334feefa10fbb826daf5e508623/prodec-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-s73jtmhl' 2026-07-13T21:06:14,418 Created temporary directory: /tmp/pip-unpack-i012vi35 2026-07-13T21:06:14,418 Building wheels for collected packages: prodec 2026-07-13T21:06:14,423 Created temporary directory: /tmp/pip-wheel-0hy_sg9i 2026-07-13T21:06:14,424 Destination directory: /tmp/pip-wheel-0hy_sg9i 2026-07-13T21:06:14,426 Building wheel for prodec (pyproject.toml): started 2026-07-13T21:06:14,428 Running command Building wheel for prodec (pyproject.toml) 2026-07-13T21:06:15,046 running bdist_wheel 2026-07-13T21:06:15,063 running build 2026-07-13T21:06:15,064 running build_py 2026-07-13T21:06:15,070 creating build/lib/prodec 2026-07-13T21:06:15,072 copying src/prodec/ProteinDescriptors.py -> build/lib/prodec 2026-07-13T21:06:15,074 copying src/prodec/Transform.py -> build/lib/prodec 2026-07-13T21:06:15,077 copying src/prodec/__init__.py -> build/lib/prodec 2026-07-13T21:06:15,078 copying src/prodec/version.py -> build/lib/prodec 2026-07-13T21:06:15,080 copying src/prodec/utils.py -> build/lib/prodec 2026-07-13T21:06:15,082 copying src/prodec/Descriptor.py -> build/lib/prodec 2026-07-13T21:06:15,084 running egg_info 2026-07-13T21:06:15,094 writing src/prodec.egg-info/PKG-INFO 2026-07-13T21:06:15,097 writing dependency_links to src/prodec.egg-info/dependency_links.txt 2026-07-13T21:06:15,099 writing requirements to src/prodec.egg-info/requires.txt 2026-07-13T21:06:15,100 writing top-level names to src/prodec.egg-info/top_level.txt 2026-07-13T21:06:15,110 reading manifest file 'src/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:15,112 adding license file 'LICENSE' 2026-07-13T21:06:15,115 writing manifest file 'src/prodec.egg-info/SOURCES.txt' 2026-07-13T21:06:15,118 copying src/prodec/data.json -> build/lib/prodec 2026-07-13T21:06:15,125 copying src/prodec/py.typed -> build/lib/prodec 2026-07-13T21:06:15,136 installing to build/bdist.linux-armv7l/wheel 2026-07-13T21:06:15,136 running install 2026-07-13T21:06:15,158 running install_lib 2026-07-13T21:06:15,164 creating build/bdist.linux-armv7l/wheel 2026-07-13T21:06:15,165 creating build/bdist.linux-armv7l/wheel/prodec 2026-07-13T21:06:15,166 copying build/lib/prodec/ProteinDescriptors.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,168 copying build/lib/prodec/Transform.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,171 copying build/lib/prodec/__init__.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,172 copying build/lib/prodec/py.typed -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,174 copying build/lib/prodec/version.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,175 copying build/lib/prodec/data.json -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,182 copying build/lib/prodec/utils.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,184 copying build/lib/prodec/Descriptor.py -> build/bdist.linux-armv7l/wheel/./prodec 2026-07-13T21:06:15,186 running install_egg_info 2026-07-13T21:06:15,191 Copying src/prodec.egg-info to build/bdist.linux-armv7l/wheel/./prodec-1.1.0-py3.11.egg-info 2026-07-13T21:06:15,200 running install_scripts 2026-07-13T21:06:15,209 creating build/bdist.linux-armv7l/wheel/prodec-1.1.0.dist-info/WHEEL 2026-07-13T21:06:15,212 creating '/tmp/pip-wheel-0hy_sg9i/.tmp-2wj0xjzr/prodec-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-07-13T21:06:15,215 adding 'prodec/Descriptor.py' 2026-07-13T21:06:15,216 adding 'prodec/ProteinDescriptors.py' 2026-07-13T21:06:15,219 adding 'prodec/Transform.py' 2026-07-13T21:06:15,220 adding 'prodec/__init__.py' 2026-07-13T21:06:15,238 adding 'prodec/data.json' 2026-07-13T21:06:15,241 adding 'prodec/py.typed' 2026-07-13T21:06:15,243 adding 'prodec/utils.py' 2026-07-13T21:06:15,244 adding 'prodec/version.py' 2026-07-13T21:06:15,248 adding 'prodec-1.1.0.dist-info/licenses/LICENSE' 2026-07-13T21:06:15,249 adding 'prodec-1.1.0.dist-info/METADATA' 2026-07-13T21:06:15,250 adding 'prodec-1.1.0.dist-info/WHEEL' 2026-07-13T21:06:15,251 adding 'prodec-1.1.0.dist-info/top_level.txt' 2026-07-13T21:06:15,252 adding 'prodec-1.1.0.dist-info/RECORD' 2026-07-13T21:06:15,254 removing build/bdist.linux-armv7l/wheel 2026-07-13T21:06:15,355 Building wheel for prodec (pyproject.toml): finished with status 'done' 2026-07-13T21:06:15,360 Created wheel for prodec: filename=prodec-1.1.0-py3-none-any.whl size=52622 sha256=1121f6211c99ace51b827b1bdf2b601d61041d1edf08a5832980c0acb6608869 2026-07-13T21:06:15,362 Stored in directory: /tmp/pip-ephem-wheel-cache-agxxwatu/wheels/cc/85/c7/41528e7d7c70260ba26671d123826be628080a196a158f7257 2026-07-13T21:06:15,372 Successfully built prodec 2026-07-13T21:06:15,377 Removed build tracker: '/tmp/pip-build-tracker-s73jtmhl'