2026-07-15T18:48:43,304 Created temporary directory: /tmp/pip-ephem-wheel-cache-71bmacj5 2026-07-15T18:48:43,306 Created temporary directory: /tmp/pip-build-tracker-ohu4rnld 2026-07-15T18:48:43,307 Initialized build tracking at /tmp/pip-build-tracker-ohu4rnld 2026-07-15T18:48:43,308 Created build tracker: /tmp/pip-build-tracker-ohu4rnld 2026-07-15T18:48:43,308 Entered build tracker: /tmp/pip-build-tracker-ohu4rnld 2026-07-15T18:48:43,309 Created temporary directory: /tmp/pip-wheel-b5ynsuyl 2026-07-15T18:48:43,312 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-15T18:48:43,314 Created temporary directory: /tmp/pip-ephem-wheel-cache-_vdtks24 2026-07-15T18:48:43,336 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-15T18:48:43,340 2 location(s) to search for versions of ga4gh-va-spec: 2026-07-15T18:48:43,340 * https://pypi.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,340 * https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,341 Fetching project page and analyzing links: https://pypi.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,342 Getting page https://pypi.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,343 Found index url https://pypi.org/simple 2026-07-15T18:48:43,673 Fetched page https://pypi.org/simple/ga4gh-va-spec/ as application/vnd.pypi.simple.v1+json 2026-07-15T18:48:43,680 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/19/98/0193ba36702117528036d926ba45cf6beb685559daa837d61ec405aecde5/ga4gh.va_spec-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,681 Found link https://files.pythonhosted.org/packages/59/ce/80bef5bf8c614460c6522b70f44bf4c528ba470df639db9bac5abe2c2635/ga4gh_va_spec-0.1.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.0 2026-07-15T18:48:43,681 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/6a/42/4d11ff68e3f45f711aea3dc2bcfdef91ef62e27ae2df3f3c16eaca9d467d/ga4gh.va_spec-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,682 Found link https://files.pythonhosted.org/packages/8c/93/94b7b559972f512bc6e181102358753d9b9b113340fafc4af78bb4999a7a/ga4gh_va_spec-0.1.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.1 2026-07-15T18:48:43,683 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/66/2e/d59a5a5367cb45f0fe81220079b7c152585430b97d68dbe4dd049cf80e93/ga4gh.va_spec-0.2.0a0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,684 Found link https://files.pythonhosted.org/packages/89/49/758a7a77a683ec127d4d7fffa5081bbc7b10ddc959af0f4622c81c74f617/ga4gh_va_spec-0.2.0a0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0a0 2026-07-15T18:48:43,685 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/09/e5/e7686769b6ffa2cdc6d285a48088a929e9c1e73f031099f4dec7c8ab98a1/ga4gh_va_spec-0.2.0a1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,685 Found link https://files.pythonhosted.org/packages/9a/a8/50d697b7e07eb56e665af2caafdafb16590dcb6f5ff07d9dab2e8f6b3a05/ga4gh_va_spec-0.2.0a1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0a1 2026-07-15T18:48:43,686 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/47/51/c1ba679b78b0385b7f7aa01c02af1c6e8af34b0038997b3a755dc873ce92/ga4gh_va_spec-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,687 Found link https://files.pythonhosted.org/packages/41/44/e298f995f8db13a55aa67a4c93e5b8056df120436bf1324ebc611147dc9c/ga4gh_va_spec-0.2.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0 2026-07-15T18:48:43,688 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/af/17/e9bbe881bec04925324fe94d2785be75b03076f3ad913f6c87a0a06f885b/ga4gh_va_spec-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,689 Found link https://files.pythonhosted.org/packages/6b/aa/921c10ce7c771772f8a6730666e75fea541c2eaadf6ada14e1716bb707ba/ga4gh_va_spec-0.3.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.3.0 2026-07-15T18:48:43,690 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/ee/3d/091b7b151714e8d44b046f130fc40ab45bf6b8de1b394f7080914730a5eb/ga4gh_va_spec-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,690 Found link https://files.pythonhosted.org/packages/11/c5/cd5fc43c4dd8fa866ef1583b6bd266adbcf5649360815b90486ab189ac02/ga4gh_va_spec-0.4.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.0 2026-07-15T18:48:43,691 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/bd/32/ee457d5fd9f1500b40e9f1a6e9e2c7bb11adb9c6ffe13f4083e6687b456e/ga4gh_va_spec-0.4.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,692 Found link https://files.pythonhosted.org/packages/66/a2/19f6e3f88341956dd5a4e486799a3222566b4c74145f32f7f18f04e84612/ga4gh_va_spec-0.4.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.1 2026-07-15T18:48:43,693 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/8f/56/30ec07f32b9ea08f13fd03dc60dbcbaa45cdc26c9a62945cb08a0d8316f7/ga4gh_va_spec-0.4.2-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,694 Found link https://files.pythonhosted.org/packages/fd/f1/aa7f0d9b9be6a25b4b97099d519f08602883bcaf6ded0a9c643d8629522e/ga4gh_va_spec-0.4.2.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.2 2026-07-15T18:48:43,694 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/93/9f/5bcd71b216a7d88d4c90f9ef92072b62bc2a0b7a2bf38aa6c5e76df53168/ga4gh_va_spec-0.4.3-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,695 Found link https://files.pythonhosted.org/packages/87/5f/63c6dcfff61b9676c3ca999ed547f09c6f6262975b2d931919f8a33d104d/ga4gh_va_spec-0.4.3.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.3 2026-07-15T18:48:43,696 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/cc/4e/c889e3eff92753c179134416c5dbc388e7e6f4c5983b11a3065f070e72a9/ga4gh_va_spec-0.4.4-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,697 Found link 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https://files.pythonhosted.org/packages/9d/a9/44b2add68585239ed7a81e64f9484b616bc4bcbbc0664211a8c08e17b4b5/ga4gh_va_spec-0.5.0a1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,701 Found link https://files.pythonhosted.org/packages/c3/21/0bd5c24554dd9f99cda7099baf6921a2b23bf59c8cc228f27f94b844b5e3/ga4gh_va_spec-0.5.0a1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a1 2026-07-15T18:48:43,702 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/c4/a4/7e0d25b73c313cd70d51b3e7b537a31715d82e80d6ecc32694ce22b4bba7/ga4gh_va_spec-0.5.0a2-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:43,702 Found link https://files.pythonhosted.org/packages/41/bd/6eb49ab513b899a96223a417e539c0078b658f14809150de475123b325cf/ga4gh_va_spec-0.5.0a2.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a2 2026-07-15T18:48:43,703 Fetching project page and analyzing links: https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,704 Getting page https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:43,705 Found index url https://www.piwheels.org/simple 2026-07-15T18:48:44,003 Fetched page https://www.piwheels.org/simple/ga4gh-va-spec/ as text/html 2026-07-15T18:48:44,008 Skipping link: No binaries permitted for ga4gh-va-spec: https://www.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.5.0a1-py3-none-any.whl#sha256=2f112805f72e1d642b897f373e2481ffcc8aeda51f50b7894c2f61b27ff4fc08 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,009 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.5.0a0-py3-none-any.whl#sha256=09d4bf679d12cebc4f1f35574b47e0b0a2d4744aabe14aabddeea818f959e317 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,009 Skipping link: No binaries permitted for ga4gh-va-spec: https://www.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.4-py3-none-any.whl#sha256=61630dd762d7eb1981ab216ab85144f5ce31d479990a7eb1757e2ee158baa2b2 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,010 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.3-py3-none-any.whl#sha256=f87d7568e006ee4c7fd7fcd4969af3504b5dc5be1eccc6c8bd6ec5da208e5b53 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,011 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.2-py3-none-any.whl#sha256=75041b8ee64e19d6a912daf8f1e77c015d4ee180c552bf091ffbff554bbd14f7 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,011 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.1-py3-none-any.whl#sha256=6cc4cde9738b92f4bf360fb931d4cc1d15acdc0c146ba49b726150ee77c7c14b (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,012 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.0-py3-none-any.whl#sha256=2b510909c18e5b0fa66bd1e8c7219caf4041013a6fce44b501983e397353a43d (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,012 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.3.0-py3-none-any.whl#sha256=c5c4049c86a30fc0b3c642a5f068aa51eb67788c3261cdd24ebe9a7d9c4d4845 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,013 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0-py3-none-any.whl#sha256=56ca42b95d4e4abe9f2c82c471d09d7d57f81eb03cc9f074dcb40d92ae691c3c (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,014 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0a1-py3-none-any.whl#sha256=433210b527d5e260b131efd5deea3441ab9c0295675d6aef60621f8729d53c01 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,014 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.2.0a0-py3-none-any.whl#sha256=7b8f6e00b9a607843bec784da99ee486228f6cad96c7765b6a51299afb86d74b (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,015 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.1-py3-none-any.whl#sha256=6e274d2eced41895395ae3f0559c77094ad3eb07aed85f8efe833563b0f4dba9 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,015 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.0-py3-none-any.whl#sha256=9e9e02d89981f64141688a9f5ce0b38aaa4dd9b1bf45cb485496a0c4521f2491 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-07-15T18:48:44,016 Skipping link: not a file: https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:44,016 Skipping link: not a file: https://pypi.org/simple/ga4gh-va-spec/ 2026-07-15T18:48:44,037 Given no hashes to check 1 links for project 'ga4gh-va-spec': discarding no candidates 2026-07-15T18:48:44,055 Collecting ga4gh-va-spec==0.5.0a2 2026-07-15T18:48:44,057 Created temporary directory: /tmp/pip-unpack-2lihzsff 2026-07-15T18:48:44,385 Downloading ga4gh_va_spec-0.5.0a2.tar.gz (50 kB) 2026-07-15T18:48:44,555 Added ga4gh-va-spec==0.5.0a2 from https://files.pythonhosted.org/packages/41/bd/6eb49ab513b899a96223a417e539c0078b658f14809150de475123b325cf/ga4gh_va_spec-0.5.0a2.tar.gz to build tracker '/tmp/pip-build-tracker-ohu4rnld' 2026-07-15T18:48:44,563 Created temporary directory: /tmp/pip-build-env-w6fzkrwm 2026-07-15T18:48:44,568 Installing build dependencies: started 2026-07-15T18:48:44,569 Running command pip subprocess to install build dependencies 2026-07-15T18:48:45,704 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-07-15T18:48:46,122 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-15T18:48:46,149 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-15T18:48:48,192 Collecting setuptools>=65.3 2026-07-15T18:48:48,193 Obtaining dependency information for setuptools>=65.3 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata 2026-07-15T18:48:48,207 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-07-15T18:48:48,558 Collecting setuptools_scm>=8 2026-07-15T18:48:48,560 Obtaining dependency information for setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl.metadata 2026-07-15T18:48:48,574 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl.metadata (6.6 kB) 2026-07-15T18:48:48,584 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl#sha256=aea276de3de0e7db4e236bb9e5a53d6c9a6dddf092f72d3b6b14f6c8c0620c3c (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.0-py3-none-any.whl#sha256=aea276de3de0e7db4e236bb9e5a53d6c9a6dddf092f72d3b6b14f6c8c0620c3c has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-07-15T18:48:48,607 Using cached setuptools_scm-10.2.0-py3-none-any.whl (27 kB) 2026-07-15T18:48:48,708 Collecting vcs-versioning<3,>=2.0.0.dev0 2026-07-15T18:48:48,709 Obtaining dependency information for vcs-versioning<3,>=2.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl.metadata 2026-07-15T18:48:48,721 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl.metadata (1.7 kB) 2026-07-15T18:48:48,922 Collecting packaging>=20 2026-07-15T18:48:48,923 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-07-15T18:48:48,939 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-07-15T18:48:49,145 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-15T18:48:49,168 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl (108 kB) 2026-07-15T18:48:49,280 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-15T18:48:49,317 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-15T18:48:49,343 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.2-py3-none-any.whl (108 kB) 2026-07-15T18:48:49,433 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-15T18:48:52,272 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-07-15T18:48:56,103 Creating /tmp/pip-build-env-w6fzkrwm/overlay/local/bin 2026-07-15T18:48:56,105 changing mode of /tmp/pip-build-env-w6fzkrwm/overlay/local/bin/vcs-versioning to 755 2026-07-15T18:48:56,240 changing mode of /tmp/pip-build-env-w6fzkrwm/overlay/local/bin/setuptools-scm to 755 2026-07-15T18:48:56,269 Successfully installed packaging-26.2 setuptools-83.0.0 setuptools_scm-10.2.0 vcs-versioning-2.2.2 2026-07-15T18:48:56,565 Installing build dependencies: finished with status 'done' 2026-07-15T18:48:56,572 Getting requirements to build wheel: started 2026-07-15T18:48:56,573 Running command Getting requirements to build wheel 2026-07-15T18:48:57,323 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-15T18:48:57,323 !! 2026-07-15T18:48:57,324 ******************************************************************************** 2026-07-15T18:48:57,325 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-15T18:48:57,326 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-15T18:48:57,327 or your builds will no longer be supported. 2026-07-15T18:48:57,328 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:57,329 ******************************************************************************** 2026-07-15T18:48:57,330 !! 2026-07-15T18:48:57,331 corresp(dist, value, root_dir) 2026-07-15T18:48:57,382 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:57,383 !! 2026-07-15T18:48:57,384 ******************************************************************************** 2026-07-15T18:48:57,384 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:57,385 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:57,386 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:57,386 ******************************************************************************** 2026-07-15T18:48:57,387 !! 2026-07-15T18:48:57,388 dist._finalize_license_expression() 2026-07-15T18:48:57,388 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:57,389 !! 2026-07-15T18:48:57,390 ******************************************************************************** 2026-07-15T18:48:57,390 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:57,391 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:57,392 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:57,392 ******************************************************************************** 2026-07-15T18:48:57,393 !! 2026-07-15T18:48:57,394 self._finalize_license_expression() 2026-07-15T18:48:57,395 running egg_info 2026-07-15T18:48:57,398 writing src/ga4gh.va_spec.egg-info/PKG-INFO 2026-07-15T18:48:57,403 writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt 2026-07-15T18:48:57,406 writing requirements to src/ga4gh.va_spec.egg-info/requires.txt 2026-07-15T18:48:57,407 writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt 2026-07-15T18:48:57,452 listing git files failed - pretending there aren't any 2026-07-15T18:48:57,461 reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:57,466 adding license file 'LICENSE' 2026-07-15T18:48:57,470 writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:57,578 Getting requirements to build wheel: finished with status 'done' 2026-07-15T18:48:57,581 Created temporary directory: /tmp/pip-modern-metadata-c7x3er00 2026-07-15T18:48:57,584 Preparing metadata (pyproject.toml): started 2026-07-15T18:48:57,585 Running command Preparing metadata (pyproject.toml) 2026-07-15T18:48:58,298 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-15T18:48:58,298 !! 2026-07-15T18:48:58,299 ******************************************************************************** 2026-07-15T18:48:58,300 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-15T18:48:58,301 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-15T18:48:58,301 or your builds will no longer be supported. 2026-07-15T18:48:58,302 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:58,303 ******************************************************************************** 2026-07-15T18:48:58,304 !! 2026-07-15T18:48:58,305 corresp(dist, value, root_dir) 2026-07-15T18:48:58,355 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:58,356 !! 2026-07-15T18:48:58,357 ******************************************************************************** 2026-07-15T18:48:58,358 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:58,359 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:58,360 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:58,360 ******************************************************************************** 2026-07-15T18:48:58,361 !! 2026-07-15T18:48:58,362 dist._finalize_license_expression() 2026-07-15T18:48:58,362 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:58,363 !! 2026-07-15T18:48:58,364 ******************************************************************************** 2026-07-15T18:48:58,364 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:58,365 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:58,366 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:58,366 ******************************************************************************** 2026-07-15T18:48:58,367 !! 2026-07-15T18:48:58,368 self._finalize_license_expression() 2026-07-15T18:48:58,369 running dist_info 2026-07-15T18:48:58,371 creating /tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info 2026-07-15T18:48:58,378 writing /tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/PKG-INFO 2026-07-15T18:48:58,384 writing dependency_links to /tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/dependency_links.txt 2026-07-15T18:48:58,387 writing requirements to /tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/requires.txt 2026-07-15T18:48:58,388 writing top-level names to /tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/top_level.txt 2026-07-15T18:48:58,389 writing manifest file '/tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:58,431 listing git files failed - pretending there aren't any 2026-07-15T18:48:58,439 reading manifest file '/tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:58,441 adding license file 'LICENSE' 2026-07-15T18:48:58,444 writing manifest file '/tmp/pip-modern-metadata-c7x3er00/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:58,445 creating '/tmp/pip-modern-metadata-c7x3er00/ga4gh_va_spec-0.5.0a2.dist-info' 2026-07-15T18:48:58,580 Preparing metadata (pyproject.toml): finished with status 'done' 2026-07-15T18:48:58,587 Source in /tmp/pip-wheel-b5ynsuyl/ga4gh-va-spec_5bd7000a184e45cda58ab96598e0a826 has version 0.5.0a2, which satisfies requirement ga4gh-va-spec==0.5.0a2 from https://files.pythonhosted.org/packages/41/bd/6eb49ab513b899a96223a417e539c0078b658f14809150de475123b325cf/ga4gh_va_spec-0.5.0a2.tar.gz 2026-07-15T18:48:58,588 Removed ga4gh-va-spec==0.5.0a2 from https://files.pythonhosted.org/packages/41/bd/6eb49ab513b899a96223a417e539c0078b658f14809150de475123b325cf/ga4gh_va_spec-0.5.0a2.tar.gz from build tracker '/tmp/pip-build-tracker-ohu4rnld' 2026-07-15T18:48:58,598 Created temporary directory: /tmp/pip-unpack-3yw5kx1p 2026-07-15T18:48:58,599 Building wheels for collected packages: ga4gh-va-spec 2026-07-15T18:48:58,603 Created temporary directory: /tmp/pip-wheel-_8xka1ly 2026-07-15T18:48:58,604 Destination directory: /tmp/pip-wheel-_8xka1ly 2026-07-15T18:48:58,606 Building wheel for ga4gh-va-spec (pyproject.toml): started 2026-07-15T18:48:58,607 Running command Building wheel for ga4gh-va-spec (pyproject.toml) 2026-07-15T18:48:59,286 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-15T18:48:59,286 !! 2026-07-15T18:48:59,287 ******************************************************************************** 2026-07-15T18:48:59,288 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-15T18:48:59,289 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-15T18:48:59,289 or your builds will no longer be supported. 2026-07-15T18:48:59,290 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:59,291 ******************************************************************************** 2026-07-15T18:48:59,291 !! 2026-07-15T18:48:59,292 corresp(dist, value, root_dir) 2026-07-15T18:48:59,339 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:59,340 !! 2026-07-15T18:48:59,341 ******************************************************************************** 2026-07-15T18:48:59,341 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:59,342 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:59,343 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:59,344 ******************************************************************************** 2026-07-15T18:48:59,345 !! 2026-07-15T18:48:59,346 dist._finalize_license_expression() 2026-07-15T18:48:59,347 /tmp/pip-build-env-w6fzkrwm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-15T18:48:59,347 !! 2026-07-15T18:48:59,348 ******************************************************************************** 2026-07-15T18:48:59,349 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-15T18:48:59,350 License :: OSI Approved :: Apache Software License 2026-07-15T18:48:59,351 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-15T18:48:59,352 ******************************************************************************** 2026-07-15T18:48:59,353 !! 2026-07-15T18:48:59,354 self._finalize_license_expression() 2026-07-15T18:48:59,355 running bdist_wheel 2026-07-15T18:48:59,374 running build 2026-07-15T18:48:59,374 running build_py 2026-07-15T18:48:59,377 creating build/lib/ga4gh/va_spec 2026-07-15T18:48:59,379 copying src/ga4gh/va_spec/__init__.py -> build/lib/ga4gh/va_spec 2026-07-15T18:48:59,382 creating build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,383 copying src/ga4gh/va_spec/base/domain_entities.py -> build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,385 copying src/ga4gh/va_spec/base/core.py -> build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,387 copying src/ga4gh/va_spec/base/enums.py -> build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,390 copying src/ga4gh/va_spec/base/__init__.py -> build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,391 copying src/ga4gh/va_spec/base/validators.py -> build/lib/ga4gh/va_spec/base 2026-07-15T18:48:59,394 creating build/lib/ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,395 copying src/ga4gh/va_spec/ccv_2022/models.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,398 copying src/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,400 copying src/ga4gh/va_spec/ccv_2022/__init__.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,402 creating build/lib/ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,403 copying src/ga4gh/va_spec/acmg_2015/models.py -> build/lib/ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,406 copying src/ga4gh/va_spec/acmg_2015/__init__.py -> build/lib/ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,409 creating build/lib/ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,409 copying src/ga4gh/va_spec/aac_2017/models.py -> build/lib/ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,412 copying src/ga4gh/va_spec/aac_2017/__init__.py -> build/lib/ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,413 running egg_info 2026-07-15T18:48:59,421 writing src/ga4gh.va_spec.egg-info/PKG-INFO 2026-07-15T18:48:59,426 writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt 2026-07-15T18:48:59,428 writing requirements to src/ga4gh.va_spec.egg-info/requires.txt 2026-07-15T18:48:59,429 writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt 2026-07-15T18:48:59,463 listing git files failed - pretending there aren't any 2026-07-15T18:48:59,470 reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:59,474 adding license file 'LICENSE' 2026-07-15T18:48:59,477 writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-07-15T18:48:59,496 installing to build/bdist.linux-armv7l/wheel 2026-07-15T18:48:59,497 running install 2026-07-15T18:48:59,520 running install_lib 2026-07-15T18:48:59,527 creating build/bdist.linux-armv7l/wheel 2026-07-15T18:48:59,530 creating build/bdist.linux-armv7l/wheel/ga4gh 2026-07-15T18:48:59,531 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec 2026-07-15T18:48:59,533 copying build/lib/ga4gh/va_spec/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec 2026-07-15T18:48:59,535 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/base 2026-07-15T18:48:59,536 copying build/lib/ga4gh/va_spec/base/domain_entities.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-07-15T18:48:59,538 copying build/lib/ga4gh/va_spec/base/core.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-07-15T18:48:59,541 copying build/lib/ga4gh/va_spec/base/enums.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-07-15T18:48:59,543 copying build/lib/ga4gh/va_spec/base/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-07-15T18:48:59,545 copying build/lib/ga4gh/va_spec/base/validators.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-07-15T18:48:59,548 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,549 copying build/lib/ga4gh/va_spec/ccv_2022/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,552 copying build/lib/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,554 copying build/lib/ga4gh/va_spec/ccv_2022/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-07-15T18:48:59,556 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,557 copying build/lib/ga4gh/va_spec/acmg_2015/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,560 copying build/lib/ga4gh/va_spec/acmg_2015/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015 2026-07-15T18:48:59,562 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,563 copying build/lib/ga4gh/va_spec/aac_2017/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,565 copying build/lib/ga4gh/va_spec/aac_2017/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017 2026-07-15T18:48:59,567 running install_egg_info 2026-07-15T18:48:59,576 Copying src/ga4gh.va_spec.egg-info to build/bdist.linux-armv7l/wheel/./ga4gh.va_spec-0.5.0a2-py3.11.egg-info 2026-07-15T18:48:59,591 running install_scripts 2026-07-15T18:48:59,602 creating build/bdist.linux-armv7l/wheel/ga4gh_va_spec-0.5.0a2.dist-info/WHEEL 2026-07-15T18:48:59,605 creating '/tmp/pip-wheel-_8xka1ly/.tmp-4hhptb4r/ga4gh_va_spec-0.5.0a2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-07-15T18:48:59,608 adding 'ga4gh/va_spec/__init__.py' 2026-07-15T18:48:59,610 adding 'ga4gh/va_spec/aac_2017/__init__.py' 2026-07-15T18:48:59,612 adding 'ga4gh/va_spec/aac_2017/models.py' 2026-07-15T18:48:59,614 adding 'ga4gh/va_spec/acmg_2015/__init__.py' 2026-07-15T18:48:59,616 adding 'ga4gh/va_spec/acmg_2015/models.py' 2026-07-15T18:48:59,618 adding 'ga4gh/va_spec/base/__init__.py' 2026-07-15T18:48:59,622 adding 'ga4gh/va_spec/base/core.py' 2026-07-15T18:48:59,624 adding 'ga4gh/va_spec/base/domain_entities.py' 2026-07-15T18:48:59,625 adding 'ga4gh/va_spec/base/enums.py' 2026-07-15T18:48:59,627 adding 'ga4gh/va_spec/base/validators.py' 2026-07-15T18:48:59,629 adding 'ga4gh/va_spec/ccv_2022/__init__.py' 2026-07-15T18:48:59,630 adding 'ga4gh/va_spec/ccv_2022/derived_evidence.py' 2026-07-15T18:48:59,632 adding 'ga4gh/va_spec/ccv_2022/models.py' 2026-07-15T18:48:59,636 adding 'ga4gh_va_spec-0.5.0a2.dist-info/licenses/LICENSE' 2026-07-15T18:48:59,638 adding 'ga4gh_va_spec-0.5.0a2.dist-info/METADATA' 2026-07-15T18:48:59,640 adding 'ga4gh_va_spec-0.5.0a2.dist-info/WHEEL' 2026-07-15T18:48:59,641 adding 'ga4gh_va_spec-0.5.0a2.dist-info/top_level.txt' 2026-07-15T18:48:59,641 adding 'ga4gh_va_spec-0.5.0a2.dist-info/RECORD' 2026-07-15T18:48:59,643 removing build/bdist.linux-armv7l/wheel 2026-07-15T18:48:59,759 Building wheel for ga4gh-va-spec (pyproject.toml): finished with status 'done' 2026-07-15T18:48:59,765 Created wheel for ga4gh-va-spec: filename=ga4gh_va_spec-0.5.0a2-py3-none-any.whl size=37904 sha256=1e845a679624d4ff31c4ae8ec89faa48a4d13511971599af96bd5e249ab42d15 2026-07-15T18:48:59,766 Stored in directory: /tmp/pip-ephem-wheel-cache-_vdtks24/wheels/eb/ef/3e/33842a0282d243f93869d777b89d094d272baf77f0f39fa108 2026-07-15T18:48:59,784 Successfully built ga4gh-va-spec 2026-07-15T18:48:59,788 Removed build tracker: '/tmp/pip-build-tracker-ohu4rnld'