2026-07-27T07:56:32,899 Created temporary directory: /tmp/pip-ephem-wheel-cache-xzsfd4bw 2026-07-27T07:56:32,901 Created temporary directory: /tmp/pip-build-tracker-79900v1c 2026-07-27T07:56:32,901 Initialized build tracking at /tmp/pip-build-tracker-79900v1c 2026-07-27T07:56:32,902 Created build tracker: /tmp/pip-build-tracker-79900v1c 2026-07-27T07:56:32,902 Entered build tracker: /tmp/pip-build-tracker-79900v1c 2026-07-27T07:56:32,903 Created temporary directory: /tmp/pip-wheel-bbti59md 2026-07-27T07:56:32,906 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-27T07:56:32,908 Created temporary directory: /tmp/pip-ephem-wheel-cache-ototls0f 2026-07-27T07:56:32,930 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-27T07:56:32,934 2 location(s) to search for versions of proteinclustertools: 2026-07-27T07:56:32,934 * https://pypi.org/simple/proteinclustertools/ 2026-07-27T07:56:32,934 * https://www.piwheels.org/simple/proteinclustertools/ 2026-07-27T07:56:32,934 Fetching project page and analyzing links: https://pypi.org/simple/proteinclustertools/ 2026-07-27T07:56:32,935 Getting page https://pypi.org/simple/proteinclustertools/ 2026-07-27T07:56:32,936 Found index url https://pypi.org/simple 2026-07-27T07:56:33,163 Fetched page https://pypi.org/simple/proteinclustertools/ as application/vnd.pypi.simple.v1+json 2026-07-27T07:56:33,171 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/b3/ce/5b41e540344031fbb13f99d592169487aef1f74aafd7c618ace61968c3df/proteinclustertools-1.0-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,171 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/17/92/d4c526a33dc008777a3ca47db4b27e3dbc6b68d11af7be9765c6dd4a0ebf/proteinclustertools-1.0.0-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,172 Found link https://files.pythonhosted.org/packages/3b/ce/84436bd831eb8ef773aae1e8acde82dc6c04f19eed4fb40e7fe0c041c491/proteinclustertools-1.0.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0 2026-07-27T07:56:33,173 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/40/12/7652bd7509c6034aacf4757d07b34284029d8bdd259d22372fc57de54ec5/proteinclustertools-1.0.1-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,174 Found link https://files.pythonhosted.org/packages/bf/62/6c1de4cca54fab6ffd6f37799341d3c978cba739068088c09ec42f1529c3/proteinclustertools-1.0.1.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.1 2026-07-27T07:56:33,175 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/13/5d/8d619567728ff658d4b5cf8c8fd958a8a9486867b1649ca778236ddf26bf/proteinclustertools-1.0.2-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,176 Found link https://files.pythonhosted.org/packages/25/33/fea6f5b5f0f12e1b0faf017efc53e13988d4ca229b5f521d59316dd478df/proteinclustertools-1.0.2.tar.gz (from 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Found link https://files.pythonhosted.org/packages/ea/cc/e89ddaaa8aceb774805347619e15e19b57931091ac5acf86e4cefdcf1925/proteinclustertools-1.0.4.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.4 2026-07-27T07:56:33,181 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/37/e0/e1234bf659d94222abc25392a19042e694097cfc4e3bf05c126e3069c91d/proteinclustertools-1.0.5-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,182 Found link https://files.pythonhosted.org/packages/85/30/8b5c553c653f7e76da5becc58f5a8b57e3fc99d013e1cd4afb3aa6f3eabc/proteinclustertools-1.0.5.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.5 2026-07-27T07:56:33,182 Skipping link: No binaries permitted for proteinclustertools: 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Found link https://files.pythonhosted.org/packages/43/4e/81024dc1abb10ab45b056465c9bfabf01604b4fe252d7d2ebf026d0c7daa/proteinclustertools-1.0.9.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.9 2026-07-27T07:56:33,189 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/f0/e7/78aed97b14e8cd610d9993cb35d2882a76b457d29a178a9065b97af1ae42/proteinclustertools-1.0.10-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,190 Found link https://files.pythonhosted.org/packages/b1/68/0948bdc6871082ac50c16e9c625055236e402bb34a6a97f921c7330a82d9/proteinclustertools-1.0.10.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.10 2026-07-27T07:56:33,191 Skipping link: No binaries permitted for proteinclustertools: 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2026-07-27T07:56:33,196 Found link https://files.pythonhosted.org/packages/0a/db/82ee1f83cac01289a1b3469eb0a234e98e32e916165c1b44c5b8dfd9dfc7/proteinclustertools-1.0.14.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.14 2026-07-27T07:56:33,197 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/c6/f5/d0aca40ddf1fbeba66b4255680589ae5f30aef1415ae004893d308fc937d/proteinclustertools-1.0.15-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,198 Found link https://files.pythonhosted.org/packages/f4/5a/3c6670370bdc2a646612fa6a3e0eb0b0e3f59c502d4b0d963f233da5b29b/proteinclustertools-1.0.15.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.15 2026-07-27T07:56:33,198 Skipping link: No binaries permitted for proteinclustertools: 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https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.17 2026-07-27T07:56:33,202 Skipping link: No binaries permitted for proteinclustertools: https://files.pythonhosted.org/packages/25/f7/5fcca036728e963dc06f464c7fcaf4aec8b48fe0b6a9edb98c80256c8af6/proteinclustertools-1.0.18-py3-none-any.whl (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,203 Found link https://files.pythonhosted.org/packages/35/47/6ab1d4d60e7c128f92ba781c03e87ed6029de8321b4578036910a0e4aa4b/proteinclustertools-1.0.18.tar.gz (from https://pypi.org/simple/proteinclustertools/) (requires-python:>=3.6), version: 1.0.18 2026-07-27T07:56:33,203 Fetching project page and analyzing links: https://www.piwheels.org/simple/proteinclustertools/ 2026-07-27T07:56:33,204 Getting page https://www.piwheels.org/simple/proteinclustertools/ 2026-07-27T07:56:33,205 Found index url https://www.piwheels.org/simple 2026-07-27T07:56:33,395 Fetched page 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2026-07-27T07:56:33,406 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.9-py3-none-any.whl#sha256=6b9f973760c4d4e892c9c07b7255eba05325232cdf72e896c0ee1939edca1f1f (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,406 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.8-py3-none-any.whl#sha256=124d65a5f28ebedf9c0efbaf81906586f93ade2e1fd0360fad21bebeb3002061 (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,407 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.7-py3-none-any.whl#sha256=002d6a2a6e221d44f95e8eb0bf03592e8da690345dcac19bd6ebe024095548fa (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,408 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.6-py3-none-any.whl#sha256=156c26a1ac58b71247de403a6ab25777be00f299a41f90bbc79b9da031b13040 (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,408 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.5-py3-none-any.whl#sha256=7620dc44230abf3a065cbc39e00037c27381ce084a9d9ab3ef8ea394082bbb9d (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,409 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.4-py3-none-any.whl#sha256=22962371eed7bd1e347ae88ea9c8ba75ddaacc89acc86700fe7dbd1cba01dddf (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,409 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.3-py3-none-any.whl#sha256=3e74ea0e412502e3961a8d61466a653849c275a9f8b26b425eaee79c0f1dfef8 (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,409 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.2-py3-none-any.whl#sha256=4552b5bf2066cada6b8ff8a6119b918aa062b12bef2dcc72f6d5e01ad5dd3d54 (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,410 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0.1-py3-none-any.whl#sha256=d3c7aa3ae7af04cc25165f17b02c1d07984bf0bb70966ca4aa5f5aee772311d9 (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,411 Skipping link: No binaries permitted for proteinclustertools: https://archive1.piwheels.org/simple/proteinclustertools/proteinclustertools-1.0-py3-none-any.whl#sha256=4b2f873f3ad13d9b29005ad548738ad28fdfad65dee35d638dcb806801d3928d (from https://www.piwheels.org/simple/proteinclustertools/) (requires-python:>=3.6) 2026-07-27T07:56:33,411 Skipping link: not a file: https://www.piwheels.org/simple/proteinclustertools/ 2026-07-27T07:56:33,412 Skipping link: not a file: https://pypi.org/simple/proteinclustertools/ 2026-07-27T07:56:33,433 Given no hashes to check 1 links for project 'proteinclustertools': discarding no candidates 2026-07-27T07:56:33,451 Collecting proteinclustertools==1.0.18 2026-07-27T07:56:33,453 Created temporary directory: /tmp/pip-unpack-bu5inael 2026-07-27T07:56:33,601 Downloading proteinclustertools-1.0.18.tar.gz (39 kB) 2026-07-27T07:56:33,689 Added proteinclustertools==1.0.18 from https://files.pythonhosted.org/packages/35/47/6ab1d4d60e7c128f92ba781c03e87ed6029de8321b4578036910a0e4aa4b/proteinclustertools-1.0.18.tar.gz to build tracker '/tmp/pip-build-tracker-79900v1c' 2026-07-27T07:56:33,693 Created temporary directory: /tmp/pip-build-env-691_1ir_ 2026-07-27T07:56:33,697 Installing build dependencies: started 2026-07-27T07:56:33,698 Running command pip subprocess to install build dependencies 2026-07-27T07:56:34,830 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-07-27T07:56:35,314 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-27T07:56:35,340 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-27T07:56:35,911 Collecting hatchling 2026-07-27T07:56:35,912 Obtaining dependency information for hatchling from https://www.piwheels.org/simple/hatchling/hatchling-1.31.0-py3-none-any.whl.metadata 2026-07-27T07:56:35,926 Using cached https://www.piwheels.org/simple/hatchling/hatchling-1.31.0-py3-none-any.whl.metadata (3.8 kB) 2026-07-27T07:56:36,121 Collecting packaging>=24.2 2026-07-27T07:56:36,122 Obtaining dependency information for packaging>=24.2 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-07-27T07:56:36,140 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-07-27T07:56:36,486 Collecting pathspec>=0.10.1 2026-07-27T07:56:36,487 Obtaining dependency information for pathspec>=0.10.1 from https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl.metadata 2026-07-27T07:56:36,500 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl.metadata (14 kB) 2026-07-27T07:56:36,622 Collecting pluggy>=1.0.0 2026-07-27T07:56:36,623 Obtaining dependency information for pluggy>=1.0.0 from https://www.piwheels.org/simple/pluggy/pluggy-1.6.0-py3-none-any.whl.metadata 2026-07-27T07:56:36,645 Using cached https://www.piwheels.org/simple/pluggy/pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB) 2026-07-27T07:56:36,903 Collecting trove-classifiers 2026-07-27T07:56:36,904 Obtaining dependency information for trove-classifiers from https://www.piwheels.org/simple/trove-classifiers/trove_classifiers-2026.6.1.19-py3-none-any.whl.metadata 2026-07-27T07:56:36,916 Using cached https://www.piwheels.org/simple/trove-classifiers/trove_classifiers-2026.6.1.19-py3-none-any.whl.metadata (2.3 kB) 2026-07-27T07:56:36,977 Using cached https://www.piwheels.org/simple/hatchling/hatchling-1.31.0-py3-none-any.whl (77 kB) 2026-07-27T07:56:36,997 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-27T07:56:37,016 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl (57 kB) 2026-07-27T07:56:37,032 Using cached https://www.piwheels.org/simple/pluggy/pluggy-1.6.0-py3-none-any.whl (20 kB) 2026-07-27T07:56:37,047 Using cached https://www.piwheels.org/simple/trove-classifiers/trove_classifiers-2026.6.1.19-py3-none-any.whl (14 kB) 2026-07-27T07:56:37,064 Using cached https://www.piwheels.org/simple/hatchling/hatchling-1.31.0-py3-none-any.whl (77 kB) 2026-07-27T07:56:37,095 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-27T07:56:37,121 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl (57 kB) 2026-07-27T07:56:37,146 Using cached https://www.piwheels.org/simple/pluggy/pluggy-1.6.0-py3-none-any.whl (20 kB) 2026-07-27T07:56:37,166 Using cached https://www.piwheels.org/simple/trove-classifiers/trove_classifiers-2026.6.1.19-py3-none-any.whl (14 kB) 2026-07-27T07:56:39,757 Installing collected packages: trove-classifiers, pluggy, pathspec, packaging, hatchling 2026-07-27T07:56:39,795 Creating /tmp/pip-build-env-691_1ir_/overlay/local/bin 2026-07-27T07:56:39,798 changing mode of /tmp/pip-build-env-691_1ir_/overlay/local/bin/trove-classifiers to 755 2026-07-27T07:56:41,049 changing mode of /tmp/pip-build-env-691_1ir_/overlay/local/bin/hatchling to 755 2026-07-27T07:56:41,308 Successfully installed hatchling-1.31.0 packaging-26.2 pathspec-1.1.1 pluggy-1.6.0 trove-classifiers-2026.6.1.19 2026-07-27T07:56:41,574 Installing build dependencies: finished with status 'done' 2026-07-27T07:56:41,580 Getting requirements to build wheel: started 2026-07-27T07:56:41,582 Running command Getting requirements to build wheel 2026-07-27T07:56:41,923 Getting requirements to build wheel: finished with status 'done' 2026-07-27T07:56:41,926 Created temporary directory: /tmp/pip-modern-metadata-cyr8ax0m 2026-07-27T07:56:41,928 Preparing metadata (pyproject.toml): started 2026-07-27T07:56:41,930 Running command Preparing metadata (pyproject.toml) 2026-07-27T07:56:42,505 Preparing metadata (pyproject.toml): finished with status 'done' 2026-07-27T07:56:42,510 Source in /tmp/pip-wheel-bbti59md/proteinclustertools_2eac200714f94f7d8cf64678d76965a7 has version 1.0.18, which satisfies requirement proteinclustertools==1.0.18 from https://files.pythonhosted.org/packages/35/47/6ab1d4d60e7c128f92ba781c03e87ed6029de8321b4578036910a0e4aa4b/proteinclustertools-1.0.18.tar.gz 2026-07-27T07:56:42,511 Removed proteinclustertools==1.0.18 from https://files.pythonhosted.org/packages/35/47/6ab1d4d60e7c128f92ba781c03e87ed6029de8321b4578036910a0e4aa4b/proteinclustertools-1.0.18.tar.gz from build tracker '/tmp/pip-build-tracker-79900v1c' 2026-07-27T07:56:42,516 Created temporary directory: /tmp/pip-unpack-yazuoirw 2026-07-27T07:56:42,517 Building wheels for collected packages: proteinclustertools 2026-07-27T07:56:42,521 Created temporary directory: /tmp/pip-wheel-rdf4_hy4 2026-07-27T07:56:42,522 Destination directory: /tmp/pip-wheel-rdf4_hy4 2026-07-27T07:56:42,524 Building wheel for proteinclustertools (pyproject.toml): started 2026-07-27T07:56:42,526 Running command Building wheel for proteinclustertools (pyproject.toml) 2026-07-27T07:56:42,655 Building wheel for proteinclustertools (pyproject.toml): finished with status 'done' 2026-07-27T07:56:42,659 Created wheel for proteinclustertools: filename=proteinclustertools-1.0.18-py3-none-any.whl size=47836 sha256=ce24ac8f4a0d651edccd17c3e74ca3f48423af7dc7f391d5a65e77905383147e 2026-07-27T07:56:42,660 Stored in directory: /tmp/pip-ephem-wheel-cache-ototls0f/wheels/3b/bc/66/9d14dc5141fab522f309cbc2f14587118051c68ea4ce5d8f47 2026-07-27T07:56:42,670 Successfully built proteinclustertools 2026-07-27T07:56:42,675 Removed build tracker: '/tmp/pip-build-tracker-79900v1c'