2026-07-28T07:51:57,995 Created temporary directory: /tmp/pip-ephem-wheel-cache-jo8ld5hb 2026-07-28T07:51:57,997 Created temporary directory: /tmp/pip-build-tracker-yoyrqebz 2026-07-28T07:51:57,997 Initialized build tracking at /tmp/pip-build-tracker-yoyrqebz 2026-07-28T07:51:57,998 Created build tracker: /tmp/pip-build-tracker-yoyrqebz 2026-07-28T07:51:57,998 Entered build tracker: /tmp/pip-build-tracker-yoyrqebz 2026-07-28T07:51:57,999 Created temporary directory: /tmp/pip-wheel-eliynubo 2026-07-28T07:51:58,002 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-28T07:51:58,004 Created temporary directory: /tmp/pip-ephem-wheel-cache-yqa5iqo2 2026-07-28T07:51:58,026 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-28T07:51:58,030 2 location(s) to search for versions of ena-upload-cli: 2026-07-28T07:51:58,030 * https://pypi.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,030 * https://www.piwheels.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,031 Fetching project page and analyzing links: https://pypi.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,032 Getting page https://pypi.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,033 Found index url https://pypi.org/simple 2026-07-28T07:51:58,258 Fetched page https://pypi.org/simple/ena-upload-cli/ as application/vnd.pypi.simple.v1+json 2026-07-28T07:51:58,276 Found link 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https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.7-py3-none-any.whl#sha256=222032b64ccbc6fb2d807f44b407156c629768b5d21a81697b1573e0384eeb3d (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,605 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.6-py3-none-any.whl#sha256=cd7d1af52044781fc98cacba46462fc906ce8c83dd0af6d6f07327334efea684 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,606 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.5-py3-none-any.whl#sha256=a10d5059bc41445b90abb1b148525fa1f8c85fa0ba504fefbf6f55664c889d48 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,606 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.4-py3-none-any.whl#sha256=5f38f594b2915595b37a449198ba5bd97e47d6cd722f8d35d8ca102984290377 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,607 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.3-py3-none-any.whl#sha256=54e55465484d749402d50a2e9bae0d612d84d3373781d1eb60b2e9b53c2f319a (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,607 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.2-py3-none-any.whl#sha256=98ca976c380dec50cbbd3b648a854ba64696df60c6e472c383a3e95053aea226 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,608 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1.1-py3-none-any.whl#sha256=c6e7e3b3eb9ca160f465df71c981c6477fd09d87651de6d462df0a29fc82ec80 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,609 Skipping link: No binaries permitted for ena-upload-cli: https://archive1.piwheels.org/simple/ena-upload-cli/ena_upload_cli-0.1-py3-none-any.whl#sha256=b410f2e8cdca090bae7052fd5170d3ae7523ec10e9ff1a4cda9669d7f2487946 (from https://www.piwheels.org/simple/ena-upload-cli/) (requires-python:>=2.7) 2026-07-28T07:51:58,610 Skipping link: not a file: https://www.piwheels.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,610 Skipping link: not a file: https://pypi.org/simple/ena-upload-cli/ 2026-07-28T07:51:58,636 Given no hashes to check 1 links for project 'ena-upload-cli': discarding no candidates 2026-07-28T07:51:58,656 Collecting ena-upload-cli==0.10.2 2026-07-28T07:51:58,658 Created temporary directory: /tmp/pip-unpack-62vdg3qo 2026-07-28T07:51:58,805 Downloading ena_upload_cli-0.10.2.tar.gz (136 kB) 2026-07-28T07:51:59,141 Added ena-upload-cli==0.10.2 from https://files.pythonhosted.org/packages/d9/5e/40d62985035c874d5b12e0b13108db6d4264ef6ad76e8708d475cfca3b64/ena_upload_cli-0.10.2.tar.gz to build tracker '/tmp/pip-build-tracker-yoyrqebz' 2026-07-28T07:51:59,143 Running setup.py (path:/tmp/pip-wheel-eliynubo/ena-upload-cli_01be759ad8e041d3b53cc33b7347f795/setup.py) egg_info for package ena-upload-cli 2026-07-28T07:51:59,145 Created temporary directory: /tmp/pip-pip-egg-info-ax16pj_f 2026-07-28T07:51:59,145 Preparing metadata (setup.py): started 2026-07-28T07:51:59,147 Running command python setup.py egg_info 2026-07-28T07:52:00,079 running egg_info 2026-07-28T07:52:00,107 creating /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info 2026-07-28T07:52:00,108 writing /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/PKG-INFO 2026-07-28T07:52:00,112 writing dependency_links to /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/dependency_links.txt 2026-07-28T07:52:00,113 writing entry points to /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/entry_points.txt 2026-07-28T07:52:00,115 writing requirements to /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/requires.txt 2026-07-28T07:52:00,116 writing top-level names to /tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/top_level.txt 2026-07-28T07:52:00,118 writing manifest file '/tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/SOURCES.txt' 2026-07-28T07:52:00,214 reading manifest file '/tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/SOURCES.txt' 2026-07-28T07:52:00,216 reading manifest template 'MANIFEST.in' 2026-07-28T07:52:00,218 warning: no files found matching 'LICENSE.txt' 2026-07-28T07:52:00,218 adding license file 'LICENSE' 2026-07-28T07:52:00,223 writing manifest file '/tmp/pip-pip-egg-info-ax16pj_f/ena_upload_cli.egg-info/SOURCES.txt' 2026-07-28T07:52:00,336 Preparing metadata (setup.py): finished with status 'done' 2026-07-28T07:52:00,341 Source in /tmp/pip-wheel-eliynubo/ena-upload-cli_01be759ad8e041d3b53cc33b7347f795 has version 0.10.2, which satisfies requirement ena-upload-cli==0.10.2 from https://files.pythonhosted.org/packages/d9/5e/40d62985035c874d5b12e0b13108db6d4264ef6ad76e8708d475cfca3b64/ena_upload_cli-0.10.2.tar.gz 2026-07-28T07:52:00,342 Removed ena-upload-cli==0.10.2 from https://files.pythonhosted.org/packages/d9/5e/40d62985035c874d5b12e0b13108db6d4264ef6ad76e8708d475cfca3b64/ena_upload_cli-0.10.2.tar.gz from build tracker '/tmp/pip-build-tracker-yoyrqebz' 2026-07-28T07:52:00,349 Created temporary directory: /tmp/pip-unpack-f3ntb4po 2026-07-28T07:52:00,350 Building wheels for collected packages: ena-upload-cli 2026-07-28T07:52:00,354 Created temporary directory: /tmp/pip-wheel-qtjjotii 2026-07-28T07:52:00,355 Building wheel for ena-upload-cli (setup.py): started 2026-07-28T07:52:00,356 Destination directory: /tmp/pip-wheel-qtjjotii 2026-07-28T07:52:00,357 Running command python setup.py bdist_wheel 2026-07-28T07:52:01,455 running bdist_wheel 2026-07-28T07:52:01,640 running build 2026-07-28T07:52:01,641 running build_py 2026-07-28T07:52:01,674 creating build/lib/tests 2026-07-28T07:52:01,679 copying tests/__init__.py -> build/lib/tests 2026-07-28T07:52:01,684 copying tests/test_ena_objects.py -> build/lib/tests 2026-07-28T07:52:01,689 creating build/lib/ena_upload 2026-07-28T07:52:01,691 copying ena_upload/__init__.py -> build/lib/ena_upload 2026-07-28T07:52:01,914 copying ena_upload/_version.py -> build/lib/ena_upload 2026-07-28T07:52:01,915 copying ena_upload/check_remote.py -> build/lib/ena_upload 2026-07-28T07:52:01,917 copying ena_upload/ena_upload.py -> build/lib/ena_upload 2026-07-28T07:52:01,920 creating build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,921 copying ena_upload/json_parsing/characteristic.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,923 copying ena_upload/json_parsing/__init__.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,924 copying ena_upload/json_parsing/ena_experiment.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,927 copying ena_upload/json_parsing/ena_run.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,929 copying ena_upload/json_parsing/ena_study.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,931 copying ena_upload/json_parsing/ena_submission.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,933 copying ena_upload/json_parsing/ena_sample.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,935 copying ena_upload/json_parsing/other_material.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:01,937 copying ena_upload/json_parsing/ena_std_lib.py -> build/lib/ena_upload/json_parsing 2026-07-28T07:52:02,163 creating build/lib/ena_upload/templates 2026-07-28T07:52:02,164 copying ena_upload/templates/ENA_template_samples_ERC000011.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,166 copying ena_upload/templates/ENA_template_samples_ERC000015.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,169 copying ena_upload/templates/ENA_template_samples_ERC000052.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,172 copying ena_upload/templates/ENA_template_samples_ERC000035.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,174 copying ena_upload/templates/ENA_template_READ_TYPE.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,176 copying ena_upload/templates/ENA_template_samples_ERC000058.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,180 copying ena_upload/templates/ENA_template_samples_ERC000056.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,187 copying ena_upload/templates/ENA_template_samples_ERC000059.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,190 copying ena_upload/templates/ENA_template_samples_ERC000023.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,193 copying ena_upload/templates/ENA_template_samples_ERC000053.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,197 copying ena_upload/templates/ENA_template_samples_ERC000043.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,200 copying ena_upload/templates/ENA_template_samples_ERC000041.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,205 copying ena_upload/templates/ENA_template_LIBRARY_SOURCE.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,207 copying ena_upload/templates/ENA_template_samples_ERC000019.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,213 copying ena_upload/templates/ENA_template_samples_ERC000044.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,219 copying ena_upload/templates/ENA_template_samples_ERC000034.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,227 copying ena_upload/templates/ENA_template_samples_ERC000032.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,233 copying ena_upload/templates/ENA_template_samples_ERC000014.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,239 copying ena_upload/templates/ENA_template_samples_ERC000055.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,248 copying ena_upload/templates/ENA_template_samples_ERC000047.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,251 copying ena_upload/templates/ENA_template_samples_ERC000050.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,254 copying ena_upload/templates/ENA_template_LIBRARY_SELECTION.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,256 copying ena_upload/templates/ENA_template_samples_ERC000045.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,258 copying ena_upload/templates/ENA_template_samples_ERC000020.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,261 copying ena_upload/templates/ENA_template_samples_ERC000057.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,264 copying ena_upload/templates/ENA_template_samples_ERC000046.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,267 copying ena_upload/templates/ENA_template_samples_ERC000025.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,270 copying ena_upload/templates/ENA_template_PLATFORM.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,273 copying ena_upload/templates/ENA_template_samples_ERC000028.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,276 copying ena_upload/templates/ENA_template_submission.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,278 copying ena_upload/templates/ENA_template_samples_ERC000017.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,281 copying ena_upload/templates/ENA_template_samples_ERC000040.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,283 copying ena_upload/templates/ENA_template_samples_ERC000013.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,286 copying ena_upload/templates/ENA_template_samples_ERC000039.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,289 copying ena_upload/templates/ENA_template_samples_ERC000060.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,292 copying ena_upload/templates/ENA_template_samples_ERC000048.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,295 copying ena_upload/templates/ENA_template_samples_ERC000026.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,297 copying ena_upload/templates/ENA_template_samples_ERC000051.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,300 copying ena_upload/templates/ENA_template_samples_ERC000024.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,303 copying ena_upload/templates/ENA_template_runs.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,306 copying ena_upload/templates/ENA_template_samples_ERC000036.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,308 copying ena_upload/templates/ENA_template_samples_ERC000029.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,311 copying ena_upload/templates/ENA_template_samples_ERC000049.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,313 copying ena_upload/templates/ENA_template_samples_ERC000031.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,317 copying ena_upload/templates/ENA_template_samples_ERC000030.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,319 copying ena_upload/templates/ENA_template_samples_ERC000016.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,322 copying ena_upload/templates/ENA_template_samples_ERC000027.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,325 copying ena_upload/templates/ENA_template_experiments.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,327 copying ena_upload/templates/ENA_template_samples_ERC000012.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,330 copying ena_upload/templates/ENA_template_samples_ERC000021.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,333 copying ena_upload/templates/ENA_template_samples_ERC000037.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,336 copying ena_upload/templates/ENA_template_samples_ERC000018.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,339 copying ena_upload/templates/ENA_template_samples_ERC000022.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,342 copying ena_upload/templates/ENA_template_LIBRARY_STRATEGY.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,344 copying ena_upload/templates/ENA_template_samples_ERC000033.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,347 copying ena_upload/templates/ENA_template_samples_ERC000038.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,349 copying ena_upload/templates/ENA_template_studies.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,351 copying ena_upload/templates/ENA_template_FILE.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,353 copying ena_upload/templates/ENA_template_FASTQFILE.xml -> build/lib/ena_upload/templates 2026-07-28T07:52:02,356 copying ena_upload/templates/SRA.experiment.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,359 copying ena_upload/templates/SRA.study.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,361 copying ena_upload/templates/SRA.submission.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,364 copying ena_upload/templates/SRA.common.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,367 copying ena_upload/templates/SRA.run.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,370 copying ena_upload/templates/SRA.sample.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,373 copying ena_upload/templates/ENA.project.xsd -> build/lib/ena_upload/templates 2026-07-28T07:52:02,375 creating build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,376 copying ena_upload/json_parsing/json_schemas/person_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,379 copying ena_upload/json_parsing/json_schemas/investigation_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,381 copying ena_upload/json_parsing/json_schemas/publication_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,383 copying ena_upload/json_parsing/json_schemas/organization_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,385 copying ena_upload/json_parsing/json_schemas/process_parameter_value_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,387 copying ena_upload/json_parsing/json_schemas/ontology_source_reference_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,389 copying ena_upload/json_parsing/json_schemas/factor_value_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,391 copying ena_upload/json_parsing/json_schemas/ontology_annotation_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,394 copying ena_upload/json_parsing/json_schemas/factor_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,396 copying ena_upload/json_parsing/json_schemas/source_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,398 copying ena_upload/json_parsing/json_schemas/material_attribute_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,400 copying ena_upload/json_parsing/json_schemas/process_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,402 copying ena_upload/json_parsing/json_schemas/comment_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,404 copying ena_upload/json_parsing/json_schemas/assay_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,406 copying ena_upload/json_parsing/json_schemas/sample_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,409 copying ena_upload/json_parsing/json_schemas/data_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,411 copying ena_upload/json_parsing/json_schemas/protocol_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,413 copying ena_upload/json_parsing/json_schemas/material_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,416 copying ena_upload/json_parsing/json_schemas/material_attribute_value_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,418 copying ena_upload/json_parsing/json_schemas/study_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,420 copying ena_upload/json_parsing/json_schemas/protocol_parameter_schema.json -> build/lib/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,473 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-07-28T07:52:02,474 !! 2026-07-28T07:52:02,476 ******************************************************************************** 2026-07-28T07:52:02,477 Please avoid running ``setup.py`` directly. 2026-07-28T07:52:02,478 Instead, use pypa/build, pypa/installer or other 2026-07-28T07:52:02,478 standards-based tools. 2026-07-28T07:52:02,480 This deprecation is overdue, please update your project and remove deprecated 2026-07-28T07:52:02,481 calls to avoid build errors in the future. 2026-07-28T07:52:02,482 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-07-28T07:52:02,483 ******************************************************************************** 2026-07-28T07:52:02,484 !! 2026-07-28T07:52:02,485 self.initialize_options() 2026-07-28T07:52:02,535 installing to build/bdist.linux-armv7l/wheel 2026-07-28T07:52:02,537 running install 2026-07-28T07:52:02,571 running install_lib 2026-07-28T07:52:02,619 creating build/bdist.linux-armv7l/wheel 2026-07-28T07:52:02,625 creating build/bdist.linux-armv7l/wheel/tests 2026-07-28T07:52:02,630 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-07-28T07:52:02,631 copying build/lib/tests/test_ena_objects.py -> build/bdist.linux-armv7l/wheel/./tests 2026-07-28T07:52:02,634 creating build/bdist.linux-armv7l/wheel/ena_upload 2026-07-28T07:52:02,636 copying build/lib/ena_upload/__init__.py -> build/bdist.linux-armv7l/wheel/./ena_upload 2026-07-28T07:52:02,639 copying build/lib/ena_upload/_version.py -> build/bdist.linux-armv7l/wheel/./ena_upload 2026-07-28T07:52:02,646 creating build/bdist.linux-armv7l/wheel/ena_upload/templates 2026-07-28T07:52:02,649 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000011.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,655 copying build/lib/ena_upload/templates/SRA.experiment.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,658 copying build/lib/ena_upload/templates/SRA.study.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,661 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000015.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,664 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000052.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,666 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000035.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,669 copying build/lib/ena_upload/templates/ENA_template_READ_TYPE.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,670 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000058.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,673 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000056.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,677 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000059.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,679 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000023.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,683 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000053.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,685 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000043.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,687 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000041.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,689 copying build/lib/ena_upload/templates/ENA_template_LIBRARY_SOURCE.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,692 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000019.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,694 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000044.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,697 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000034.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,699 copying build/lib/ena_upload/templates/SRA.submission.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,701 copying build/lib/ena_upload/templates/SRA.common.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,704 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000032.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,707 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000014.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,710 copying build/lib/ena_upload/templates/SRA.run.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,713 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000055.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,716 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000047.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,718 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000050.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,720 copying build/lib/ena_upload/templates/ENA_template_LIBRARY_SELECTION.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,722 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000045.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,725 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000020.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,727 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000057.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,730 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000046.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,732 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000025.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,735 copying build/lib/ena_upload/templates/SRA.sample.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,737 copying build/lib/ena_upload/templates/ENA.project.xsd -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,739 copying build/lib/ena_upload/templates/ENA_template_PLATFORM.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,741 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000028.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,743 copying build/lib/ena_upload/templates/ENA_template_submission.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,745 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000017.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,748 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000040.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,750 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000013.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,753 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000039.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,755 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000060.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,758 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000048.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,760 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000026.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,762 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000051.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,764 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000024.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,767 copying build/lib/ena_upload/templates/ENA_template_runs.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,769 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000036.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,771 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000029.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,774 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000049.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,776 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000031.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,779 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000030.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,782 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000016.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,784 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000027.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,787 copying build/lib/ena_upload/templates/ENA_template_experiments.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,789 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000012.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,791 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000021.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,794 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000037.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,797 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000018.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,800 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000022.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,802 copying build/lib/ena_upload/templates/ENA_template_LIBRARY_STRATEGY.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,805 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000033.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,807 copying build/lib/ena_upload/templates/ENA_template_samples_ERC000038.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,809 copying build/lib/ena_upload/templates/ENA_template_studies.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,811 copying build/lib/ena_upload/templates/ENA_template_FILE.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,813 copying build/lib/ena_upload/templates/ENA_template_FASTQFILE.xml -> build/bdist.linux-armv7l/wheel/./ena_upload/templates 2026-07-28T07:52:02,815 copying build/lib/ena_upload/check_remote.py -> build/bdist.linux-armv7l/wheel/./ena_upload 2026-07-28T07:52:02,816 copying build/lib/ena_upload/ena_upload.py -> build/bdist.linux-armv7l/wheel/./ena_upload 2026-07-28T07:52:02,820 creating build/bdist.linux-armv7l/wheel/ena_upload/json_parsing 2026-07-28T07:52:02,821 copying build/lib/ena_upload/json_parsing/characteristic.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,823 copying build/lib/ena_upload/json_parsing/__init__.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,824 copying build/lib/ena_upload/json_parsing/ena_experiment.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,826 copying build/lib/ena_upload/json_parsing/ena_run.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,828 copying build/lib/ena_upload/json_parsing/ena_study.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,831 copying build/lib/ena_upload/json_parsing/ena_submission.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,833 copying build/lib/ena_upload/json_parsing/ena_sample.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,835 creating build/bdist.linux-armv7l/wheel/ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,836 copying build/lib/ena_upload/json_parsing/json_schemas/person_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,838 copying build/lib/ena_upload/json_parsing/json_schemas/investigation_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,840 copying build/lib/ena_upload/json_parsing/json_schemas/publication_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,842 copying build/lib/ena_upload/json_parsing/json_schemas/organization_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,844 copying build/lib/ena_upload/json_parsing/json_schemas/process_parameter_value_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,846 copying build/lib/ena_upload/json_parsing/json_schemas/ontology_source_reference_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,847 copying build/lib/ena_upload/json_parsing/json_schemas/factor_value_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,849 copying build/lib/ena_upload/json_parsing/json_schemas/ontology_annotation_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,851 copying build/lib/ena_upload/json_parsing/json_schemas/factor_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,853 copying build/lib/ena_upload/json_parsing/json_schemas/source_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,855 copying build/lib/ena_upload/json_parsing/json_schemas/material_attribute_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,856 copying build/lib/ena_upload/json_parsing/json_schemas/process_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,858 copying build/lib/ena_upload/json_parsing/json_schemas/comment_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,860 copying build/lib/ena_upload/json_parsing/json_schemas/assay_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,862 copying build/lib/ena_upload/json_parsing/json_schemas/sample_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,864 copying build/lib/ena_upload/json_parsing/json_schemas/data_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,865 copying build/lib/ena_upload/json_parsing/json_schemas/protocol_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,867 copying build/lib/ena_upload/json_parsing/json_schemas/material_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,869 copying build/lib/ena_upload/json_parsing/json_schemas/material_attribute_value_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,870 copying build/lib/ena_upload/json_parsing/json_schemas/study_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,872 copying build/lib/ena_upload/json_parsing/json_schemas/protocol_parameter_schema.json -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing/json_schemas 2026-07-28T07:52:02,874 copying build/lib/ena_upload/json_parsing/other_material.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,876 copying build/lib/ena_upload/json_parsing/ena_std_lib.py -> build/bdist.linux-armv7l/wheel/./ena_upload/json_parsing 2026-07-28T07:52:02,878 running install_egg_info 2026-07-28T07:52:02,912 running egg_info 2026-07-28T07:52:02,942 writing ena_upload_cli.egg-info/PKG-INFO 2026-07-28T07:52:02,945 writing dependency_links to ena_upload_cli.egg-info/dependency_links.txt 2026-07-28T07:52:02,947 writing entry points to ena_upload_cli.egg-info/entry_points.txt 2026-07-28T07:52:02,948 writing requirements to ena_upload_cli.egg-info/requires.txt 2026-07-28T07:52:02,950 writing top-level names to ena_upload_cli.egg-info/top_level.txt 2026-07-28T07:52:03,208 reading manifest file 'ena_upload_cli.egg-info/SOURCES.txt' 2026-07-28T07:52:03,215 reading manifest template 'MANIFEST.in' 2026-07-28T07:52:03,216 warning: no files found matching 'LICENSE.txt' 2026-07-28T07:52:03,217 adding license file 'LICENSE' 2026-07-28T07:52:03,223 writing manifest file 'ena_upload_cli.egg-info/SOURCES.txt' 2026-07-28T07:52:03,225 Copying ena_upload_cli.egg-info to build/bdist.linux-armv7l/wheel/./ena_upload_cli-0.10.2-py3.11.egg-info 2026-07-28T07:52:03,237 running install_scripts 2026-07-28T07:52:03,250 creating build/bdist.linux-armv7l/wheel/ena_upload_cli-0.10.2.dist-info/WHEEL 2026-07-28T07:52:03,253 creating '/tmp/pip-wheel-qtjjotii/ena_upload_cli-0.10.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-07-28T07:52:03,255 adding 'ena_upload/__init__.py' 2026-07-28T07:52:03,256 adding 'ena_upload/_version.py' 2026-07-28T07:52:03,258 adding 'ena_upload/check_remote.py' 2026-07-28T07:52:03,263 adding 'ena_upload/ena_upload.py' 2026-07-28T07:52:03,265 adding 'ena_upload/json_parsing/__init__.py' 2026-07-28T07:52:03,266 adding 'ena_upload/json_parsing/characteristic.py' 2026-07-28T07:52:03,268 adding 'ena_upload/json_parsing/ena_experiment.py' 2026-07-28T07:52:03,270 adding 'ena_upload/json_parsing/ena_run.py' 2026-07-28T07:52:03,271 adding 'ena_upload/json_parsing/ena_sample.py' 2026-07-28T07:52:03,273 adding 'ena_upload/json_parsing/ena_std_lib.py' 2026-07-28T07:52:03,274 adding 'ena_upload/json_parsing/ena_study.py' 2026-07-28T07:52:03,276 adding 'ena_upload/json_parsing/ena_submission.py' 2026-07-28T07:52:03,277 adding 'ena_upload/json_parsing/other_material.py' 2026-07-28T07:52:03,279 adding 'ena_upload/json_parsing/json_schemas/assay_schema.json' 2026-07-28T07:52:03,280 adding 'ena_upload/json_parsing/json_schemas/comment_schema.json' 2026-07-28T07:52:03,281 adding 'ena_upload/json_parsing/json_schemas/data_schema.json' 2026-07-28T07:52:03,283 adding 'ena_upload/json_parsing/json_schemas/factor_schema.json' 2026-07-28T07:52:03,284 adding 'ena_upload/json_parsing/json_schemas/factor_value_schema.json' 2026-07-28T07:52:03,285 adding 'ena_upload/json_parsing/json_schemas/investigation_schema.json' 2026-07-28T07:52:03,286 adding 'ena_upload/json_parsing/json_schemas/material_attribute_schema.json' 2026-07-28T07:52:03,287 adding 'ena_upload/json_parsing/json_schemas/material_attribute_value_schema.json' 2026-07-28T07:52:03,288 adding 'ena_upload/json_parsing/json_schemas/material_schema.json' 2026-07-28T07:52:03,290 adding 'ena_upload/json_parsing/json_schemas/ontology_annotation_schema.json' 2026-07-28T07:52:03,291 adding 'ena_upload/json_parsing/json_schemas/ontology_source_reference_schema.json' 2026-07-28T07:52:03,292 adding 'ena_upload/json_parsing/json_schemas/organization_schema.json' 2026-07-28T07:52:03,293 adding 'ena_upload/json_parsing/json_schemas/person_schema.json' 2026-07-28T07:52:03,294 adding 'ena_upload/json_parsing/json_schemas/process_parameter_value_schema.json' 2026-07-28T07:52:03,296 adding 'ena_upload/json_parsing/json_schemas/process_schema.json' 2026-07-28T07:52:03,297 adding 'ena_upload/json_parsing/json_schemas/protocol_parameter_schema.json' 2026-07-28T07:52:03,298 adding 'ena_upload/json_parsing/json_schemas/protocol_schema.json' 2026-07-28T07:52:03,299 adding 'ena_upload/json_parsing/json_schemas/publication_schema.json' 2026-07-28T07:52:03,301 adding 'ena_upload/json_parsing/json_schemas/sample_schema.json' 2026-07-28T07:52:03,302 adding 'ena_upload/json_parsing/json_schemas/source_schema.json' 2026-07-28T07:52:03,303 adding 'ena_upload/json_parsing/json_schemas/study_schema.json' 2026-07-28T07:52:03,306 adding 'ena_upload/templates/ENA.project.xsd' 2026-07-28T07:52:03,308 adding 'ena_upload/templates/ENA_template_FASTQFILE.xml' 2026-07-28T07:52:03,309 adding 'ena_upload/templates/ENA_template_FILE.xml' 2026-07-28T07:52:03,310 adding 'ena_upload/templates/ENA_template_LIBRARY_SELECTION.xml' 2026-07-28T07:52:03,311 adding 'ena_upload/templates/ENA_template_LIBRARY_SOURCE.xml' 2026-07-28T07:52:03,313 adding 'ena_upload/templates/ENA_template_LIBRARY_STRATEGY.xml' 2026-07-28T07:52:03,314 adding 'ena_upload/templates/ENA_template_PLATFORM.xml' 2026-07-28T07:52:03,316 adding 'ena_upload/templates/ENA_template_READ_TYPE.xml' 2026-07-28T07:52:03,317 adding 'ena_upload/templates/ENA_template_experiments.xml' 2026-07-28T07:52:03,318 adding 'ena_upload/templates/ENA_template_runs.xml' 2026-07-28T07:52:03,320 adding 'ena_upload/templates/ENA_template_samples_ERC000011.xml' 2026-07-28T07:52:03,322 adding 'ena_upload/templates/ENA_template_samples_ERC000012.xml' 2026-07-28T07:52:03,324 adding 'ena_upload/templates/ENA_template_samples_ERC000013.xml' 2026-07-28T07:52:03,327 adding 'ena_upload/templates/ENA_template_samples_ERC000014.xml' 2026-07-28T07:52:03,329 adding 'ena_upload/templates/ENA_template_samples_ERC000015.xml' 2026-07-28T07:52:03,331 adding 'ena_upload/templates/ENA_template_samples_ERC000016.xml' 2026-07-28T07:52:03,333 adding 'ena_upload/templates/ENA_template_samples_ERC000017.xml' 2026-07-28T07:52:03,335 adding 'ena_upload/templates/ENA_template_samples_ERC000018.xml' 2026-07-28T07:52:03,338 adding 'ena_upload/templates/ENA_template_samples_ERC000019.xml' 2026-07-28T07:52:03,342 adding 'ena_upload/templates/ENA_template_samples_ERC000020.xml' 2026-07-28T07:52:03,346 adding 'ena_upload/templates/ENA_template_samples_ERC000021.xml' 2026-07-28T07:52:03,349 adding 'ena_upload/templates/ENA_template_samples_ERC000022.xml' 2026-07-28T07:52:03,352 adding 'ena_upload/templates/ENA_template_samples_ERC000023.xml' 2026-07-28T07:52:03,356 adding 'ena_upload/templates/ENA_template_samples_ERC000024.xml' 2026-07-28T07:52:03,359 adding 'ena_upload/templates/ENA_template_samples_ERC000025.xml' 2026-07-28T07:52:03,361 adding 'ena_upload/templates/ENA_template_samples_ERC000026.xml' 2026-07-28T07:52:03,365 adding 'ena_upload/templates/ENA_template_samples_ERC000027.xml' 2026-07-28T07:52:03,367 adding 'ena_upload/templates/ENA_template_samples_ERC000028.xml' 2026-07-28T07:52:03,369 adding 'ena_upload/templates/ENA_template_samples_ERC000029.xml' 2026-07-28T07:52:03,371 adding 'ena_upload/templates/ENA_template_samples_ERC000030.xml' 2026-07-28T07:52:03,376 adding 'ena_upload/templates/ENA_template_samples_ERC000031.xml' 2026-07-28T07:52:03,379 adding 'ena_upload/templates/ENA_template_samples_ERC000032.xml' 2026-07-28T07:52:03,381 adding 'ena_upload/templates/ENA_template_samples_ERC000033.xml' 2026-07-28T07:52:03,383 adding 'ena_upload/templates/ENA_template_samples_ERC000034.xml' 2026-07-28T07:52:03,385 adding 'ena_upload/templates/ENA_template_samples_ERC000035.xml' 2026-07-28T07:52:03,387 adding 'ena_upload/templates/ENA_template_samples_ERC000036.xml' 2026-07-28T07:52:03,390 adding 'ena_upload/templates/ENA_template_samples_ERC000037.xml' 2026-07-28T07:52:03,392 adding 'ena_upload/templates/ENA_template_samples_ERC000038.xml' 2026-07-28T07:52:03,394 adding 'ena_upload/templates/ENA_template_samples_ERC000039.xml' 2026-07-28T07:52:03,396 adding 'ena_upload/templates/ENA_template_samples_ERC000040.xml' 2026-07-28T07:52:03,399 adding 'ena_upload/templates/ENA_template_samples_ERC000041.xml' 2026-07-28T07:52:03,400 adding 'ena_upload/templates/ENA_template_samples_ERC000043.xml' 2026-07-28T07:52:03,402 adding 'ena_upload/templates/ENA_template_samples_ERC000044.xml' 2026-07-28T07:52:03,404 adding 'ena_upload/templates/ENA_template_samples_ERC000045.xml' 2026-07-28T07:52:03,406 adding 'ena_upload/templates/ENA_template_samples_ERC000046.xml' 2026-07-28T07:52:03,408 adding 'ena_upload/templates/ENA_template_samples_ERC000047.xml' 2026-07-28T07:52:03,410 adding 'ena_upload/templates/ENA_template_samples_ERC000048.xml' 2026-07-28T07:52:03,413 adding 'ena_upload/templates/ENA_template_samples_ERC000049.xml' 2026-07-28T07:52:03,416 adding 'ena_upload/templates/ENA_template_samples_ERC000050.xml' 2026-07-28T07:52:03,418 adding 'ena_upload/templates/ENA_template_samples_ERC000051.xml' 2026-07-28T07:52:03,420 adding 'ena_upload/templates/ENA_template_samples_ERC000052.xml' 2026-07-28T07:52:03,422 adding 'ena_upload/templates/ENA_template_samples_ERC000053.xml' 2026-07-28T07:52:03,426 adding 'ena_upload/templates/ENA_template_samples_ERC000055.xml' 2026-07-28T07:52:03,433 adding 'ena_upload/templates/ENA_template_samples_ERC000056.xml' 2026-07-28T07:52:03,437 adding 'ena_upload/templates/ENA_template_samples_ERC000057.xml' 2026-07-28T07:52:03,440 adding 'ena_upload/templates/ENA_template_samples_ERC000058.xml' 2026-07-28T07:52:03,442 adding 'ena_upload/templates/ENA_template_samples_ERC000059.xml' 2026-07-28T07:52:03,444 adding 'ena_upload/templates/ENA_template_samples_ERC000060.xml' 2026-07-28T07:52:03,445 adding 'ena_upload/templates/ENA_template_studies.xml' 2026-07-28T07:52:03,447 adding 'ena_upload/templates/ENA_template_submission.xml' 2026-07-28T07:52:03,451 adding 'ena_upload/templates/SRA.common.xsd' 2026-07-28T07:52:03,455 adding 'ena_upload/templates/SRA.experiment.xsd' 2026-07-28T07:52:03,458 adding 'ena_upload/templates/SRA.run.xsd' 2026-07-28T07:52:03,459 adding 'ena_upload/templates/SRA.sample.xsd' 2026-07-28T07:52:03,461 adding 'ena_upload/templates/SRA.study.xsd' 2026-07-28T07:52:03,463 adding 'ena_upload/templates/SRA.submission.xsd' 2026-07-28T07:52:03,466 adding 'ena_upload_cli-0.10.2.dist-info/licenses/LICENSE' 2026-07-28T07:52:03,468 adding 'tests/__init__.py' 2026-07-28T07:52:03,469 adding 'tests/test_ena_objects.py' 2026-07-28T07:52:03,472 adding 'ena_upload_cli-0.10.2.dist-info/METADATA' 2026-07-28T07:52:03,473 adding 'ena_upload_cli-0.10.2.dist-info/WHEEL' 2026-07-28T07:52:03,474 adding 'ena_upload_cli-0.10.2.dist-info/entry_points.txt' 2026-07-28T07:52:03,475 adding 'ena_upload_cli-0.10.2.dist-info/top_level.txt' 2026-07-28T07:52:03,477 adding 'ena_upload_cli-0.10.2.dist-info/RECORD' 2026-07-28T07:52:03,482 removing build/bdist.linux-armv7l/wheel 2026-07-28T07:52:03,620 Building wheel for ena-upload-cli (setup.py): finished with status 'done' 2026-07-28T07:52:03,625 Created wheel for ena-upload-cli: filename=ena_upload_cli-0.10.2-py3-none-any.whl size=209197 sha256=104c6baf1cf688f002f972f0e77ef3f85254de5cb303aa2d6c17de0138389bf8 2026-07-28T07:52:03,626 Stored in directory: /tmp/pip-ephem-wheel-cache-yqa5iqo2/wheels/96/32/ff/db9c0a5801bb3d4de125aa83585e2a73b967a730359ef8d17a 2026-07-28T07:52:03,643 Successfully built ena-upload-cli 2026-07-28T07:52:03,702 Removed build tracker: '/tmp/pip-build-tracker-yoyrqebz'