2026-07-31T04:13:40,262 Created temporary directory: /tmp/pip-ephem-wheel-cache-tglxg2y3 2026-07-31T04:13:40,264 Created temporary directory: /tmp/pip-build-tracker-8o6h8j4y 2026-07-31T04:13:40,265 Initialized build tracking at /tmp/pip-build-tracker-8o6h8j4y 2026-07-31T04:13:40,265 Created build tracker: /tmp/pip-build-tracker-8o6h8j4y 2026-07-31T04:13:40,265 Entered build tracker: /tmp/pip-build-tracker-8o6h8j4y 2026-07-31T04:13:40,266 Created temporary directory: /tmp/pip-wheel-5045g031 2026-07-31T04:13:40,269 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-31T04:13:40,271 Created temporary directory: /tmp/pip-ephem-wheel-cache-iffsix0h 2026-07-31T04:13:40,292 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-31T04:13:40,296 2 location(s) to search for versions of bioio: 2026-07-31T04:13:40,296 * https://pypi.org/simple/bioio/ 2026-07-31T04:13:40,296 * https://www.piwheels.org/simple/bioio/ 2026-07-31T04:13:40,297 Fetching project page and analyzing links: https://pypi.org/simple/bioio/ 2026-07-31T04:13:40,297 Getting page https://pypi.org/simple/bioio/ 2026-07-31T04:13:40,299 Found index url https://pypi.org/simple 2026-07-31T04:13:40,527 Fetched page https://pypi.org/simple/bioio/ as application/vnd.pypi.simple.v1+json 2026-07-31T04:13:40,536 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ec/85/18a0360b412b68373b948dcfec4ca5cf06614323162dc1cf6e867582348a/bioio-0.0.1-py3-none-any.whl 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link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/4d/81/5bcfc81747e47a34c91686a6945589cb5007c6513673f9f10470ca86d845/bioio-1.1.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,547 Found link https://files.pythonhosted.org/packages/e3/b9/60562a3e153ccdc662442430b84d782a53f00293dfba032d37585e5544b7/bioio-1.1.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 1.1.0 2026-07-31T04:13:40,548 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/83/db/c35975cbab90c921f5490a4bb4bcdf037c319de3ebccfe031827746ffd48/bioio-1.2.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,548 Found link https://files.pythonhosted.org/packages/5f/d1/06c62f867899294da7fa0e36857338fa2f865dcbcaaf46517a2aa7ee54f8/bioio-1.2.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 1.2.0 2026-07-31T04:13:40,549 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/58/fc/ec23738a400cac3b0ae0434fb18ce5942a3e35457129229b33fe26c5733c/bioio-1.2.1-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,550 Found link https://files.pythonhosted.org/packages/2b/45/cb162089363e58a259ffc0948542230004b0977224f844ba45d37e287040/bioio-1.2.1.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 1.2.1 2026-07-31T04:13:40,551 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/6c/8c/e335c17ec4c0a4be321e0ed4dfc4cbab26424a1770aadeb73bb5c5b7cc42/bioio-1.3.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,551 Found link https://files.pythonhosted.org/packages/dc/f9/992cdf05b2dc858ae140f13099408e5d6038896ef09c0dcfab35361e18db/bioio-1.3.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 1.3.0 2026-07-31T04:13:40,552 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/90/13/3161a0d5ea9c8ddf6df932d024d0369e4754e7aaf6dfa49e03bcd83cdc13/bioio-1.4.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,553 Found link https://files.pythonhosted.org/packages/dc/a2/95be51b5110b72a8f9a38255220cc34d6dffbe1dc6865f42e963d01f5401/bioio-1.4.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 1.4.0 2026-07-31T04:13:40,554 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/e8/fe/88a5bc2ae926f15c8ea10e9964aeac11c9fce82760bc778fd6b1316ca8c1/bioio-1.5.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,555 Found link https://files.pythonhosted.org/packages/cb/75/53c354e6e0944cb4b979b8bb126b8594ca1e7b5ed2ec82f1fb60dde7f6df/bioio-1.5.0.tar.gz (from 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2026-07-31T04:13:40,561 Found link https://files.pythonhosted.org/packages/0a/17/a1b9dde99bd4c76cf00d1856c8f00c4e0b68b6ea8bfddd6a567e51f60df6/bioio-2.0.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 2.0.0 2026-07-31T04:13:40,561 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/a1/02/c6713b1d38fdf6b705265e8def466ed22f62c0684b8ee030809ad396924e/bioio-3.0.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,562 Found link https://files.pythonhosted.org/packages/f1/95/0f9c15d0e329da74d63ad8495ddb6563d53ee27bc4eea9dc471f59648015/bioio-3.0.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.0.0 2026-07-31T04:13:40,562 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ce/2f/3d487c4147a3af1948a214e93d7c0dc3e05b6e2ccd47f6b1c212a11239df/bioio-3.1.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) 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https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,566 Found link https://files.pythonhosted.org/packages/99/0f/2e6ef1db997626168f618835c87cca34da5c7de6a7a10d19c3f43f342c39/bioio-3.3.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.3.0 2026-07-31T04:13:40,567 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/95/5e/dda19fde262f74c310602e3c85f2a88fa591fb417c26a93a7d878e28c7f4/bioio-3.4.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,568 Found link https://files.pythonhosted.org/packages/46/77/997629e256236442e2efb6e81c5347506d585f520e91a8fc45bbb9e71345/bioio-3.4.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.4.0 2026-07-31T04:13:40,568 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/16/97/101482020959bf84a332c49199eacca80299a811379353fe44068f64e44d/bioio-3.5.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,569 Found link https://files.pythonhosted.org/packages/45/67/f708f15f62f92e97e65f2bfb11d337486ca0916159f7b87782541fca4348/bioio-3.5.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.5.0 2026-07-31T04:13:40,570 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioio/ 2026-07-31T04:13:40,571 Getting page https://www.piwheels.org/simple/bioio/ 2026-07-31T04:13:40,572 Found index url https://www.piwheels.org/simple 2026-07-31T04:13:40,763 Fetched page https://www.piwheels.org/simple/bioio/ as text/html 2026-07-31T04:13:40,770 Skipping link: No binaries permitted for bioio: https://www.piwheels.org/simple/bioio/bioio-3.4.0-py3-none-any.whl#sha256=87aba7eeff4edfb134d7f4219cb342263ec9d5279ffd46c02e4b7f6a42249ff3 (from 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https://archive1.piwheels.org/simple/bioio/bioio-1.4.0-py3-none-any.whl#sha256=7ae2b415b7a8a1948cf9477f0db1ce41f38f80e14977f3bf140295ce874efdd5 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,776 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.3.0-py3-none-any.whl#sha256=9993ac5162cb68a0ce0e78fbf0108d677d934df1cb55adf11f7cc1c0e37718db (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.10) 2026-07-31T04:13:40,777 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.2.1-py3-none-any.whl#sha256=1b1e660face2a1cae38241ed388a112dfeb9c8d5c1557a1b473bd78fe710209b (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,777 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.2.0-py3-none-any.whl#sha256=14dfbfc3b8d18408b901cba376915b4af44aaafba436169eadca99cc4035afde (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,778 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.1.0-py3-none-any.whl#sha256=dde354c64ea6e1cab6b22301e33e134bf25c4244cbc2992baba35e655cbb6946 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,778 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.3-py3-none-any.whl#sha256=b004d0fb6519ef695203c5a634cc5bde53a90826e54ed0e84a43647c7ceeda84 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,779 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.2-py3-none-any.whl#sha256=f4a4cb08e669d2759a3a3174183cd01cfd34d0662f80555f564e2fe4857e3a8c (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,779 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.1-py3-none-any.whl#sha256=0f88dfd65e2dc8224f8281d276d8fbc22eb1c4c8fe919616ae344a8115b82ed5 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,779 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.0-py3-none-any.whl#sha256=9cdf1d2c7a7745467b3a12f1c228b95c113ea7ab75783f0b309128524f5538b4 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,780 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-0.9.0-py3-none-any.whl#sha256=8f364e12cc93bff8588ec4abc17b7fee8259db430268d68dc0826b340cd12467 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-07-31T04:13:40,781 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-0.0.1-py3-none-any.whl#sha256=4cf5623749a4c10aecaa4bc13a137106f7fc6e14af282a0f21ea0505ffe8cf85 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.8) 2026-07-31T04:13:40,781 Skipping link: not a file: https://www.piwheels.org/simple/bioio/ 2026-07-31T04:13:40,782 Skipping link: not a file: https://pypi.org/simple/bioio/ 2026-07-31T04:13:40,805 Given no hashes to check 1 links for project 'bioio': discarding no candidates 2026-07-31T04:13:40,824 Collecting bioio==3.5.0 2026-07-31T04:13:40,826 Created temporary directory: /tmp/pip-unpack-swkb8a9e 2026-07-31T04:13:41,057 Downloading bioio-3.5.0.tar.gz (61 kB) 2026-07-31T04:13:41,213 Added bioio==3.5.0 from https://files.pythonhosted.org/packages/45/67/f708f15f62f92e97e65f2bfb11d337486ca0916159f7b87782541fca4348/bioio-3.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-8o6h8j4y' 2026-07-31T04:13:41,221 Created temporary directory: /tmp/pip-build-env-thoswlwn 2026-07-31T04:13:41,226 Installing build dependencies: started 2026-07-31T04:13:41,227 Running command pip subprocess to install build dependencies 2026-07-31T04:13:42,361 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-07-31T04:13:43,230 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-31T04:13:43,253 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-31T04:13:45,030 Collecting setuptools>=65 2026-07-31T04:13:45,031 Obtaining dependency information for setuptools>=65 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata 2026-07-31T04:13:45,047 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-07-31T04:13:45,285 Collecting wheel 2026-07-31T04:13:45,286 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-07-31T04:13:45,300 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-07-31T04:13:45,653 Collecting setuptools_scm[toml]>=6.2 2026-07-31T04:13:45,654 Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata 2026-07-31T04:13:45,667 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata (6.7 kB) 2026-07-31T04:13:45,677 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-07-31T04:13:45,702 Using cached setuptools_scm-10.2.1-py3-none-any.whl (29 kB) 2026-07-31T04:13:45,915 Collecting packaging>=24.0 2026-07-31T04:13:45,916 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-07-31T04:13:45,930 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-07-31T04:13:46,035 Collecting vcs-versioning<3,>=2.0.0.dev0 2026-07-31T04:13:46,036 Obtaining dependency information for vcs-versioning<3,>=2.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata 2026-07-31T04:13:46,050 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata (1.7 kB) 2026-07-31T04:13:46,328 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-07-31T04:13:46,347 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-31T04:13:46,370 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-07-31T04:13:46,450 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-31T04:13:46,483 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-07-31T04:13:46,507 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-31T04:13:46,534 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-07-31T04:13:46,628 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-31T04:13:49,461 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm 2026-07-31T04:13:54,465 Creating /tmp/pip-build-env-thoswlwn/overlay/local/bin 2026-07-31T04:13:54,468 changing mode of /tmp/pip-build-env-thoswlwn/overlay/local/bin/wheel to 755 2026-07-31T04:13:55,478 changing mode of /tmp/pip-build-env-thoswlwn/overlay/local/bin/vcs-versioning to 755 2026-07-31T04:13:55,636 changing mode of /tmp/pip-build-env-thoswlwn/overlay/local/bin/setuptools-scm to 755 2026-07-31T04:13:55,673 Successfully installed packaging-26.2 setuptools-83.0.0 setuptools_scm-10.2.1 vcs-versioning-2.2.3 wheel-0.47.0 2026-07-31T04:13:55,977 Installing build dependencies: finished with status 'done' 2026-07-31T04:13:55,983 Getting requirements to build wheel: started 2026-07-31T04:13:55,984 Running command Getting requirements to build wheel 2026-07-31T04:13:57,289 /tmp/pip-build-env-thoswlwn/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-31T04:13:57,289 !! 2026-07-31T04:13:57,290 ******************************************************************************** 2026-07-31T04:13:57,291 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-31T04:13:57,292 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-31T04:13:57,293 or your builds will no longer be supported. 2026-07-31T04:13:57,294 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-31T04:13:57,295 ******************************************************************************** 2026-07-31T04:13:57,296 !! 2026-07-31T04:13:57,297 corresp(dist, value, root_dir) 2026-07-31T04:13:57,346 running egg_info 2026-07-31T04:13:57,359 writing bioio.egg-info/PKG-INFO 2026-07-31T04:13:57,368 writing dependency_links to bioio.egg-info/dependency_links.txt 2026-07-31T04:13:57,374 writing requirements to bioio.egg-info/requires.txt 2026-07-31T04:13:57,376 writing top-level names to bioio.egg-info/top_level.txt 2026-07-31T04:13:57,402 reading manifest template 'MANIFEST.in' 2026-07-31T04:13:57,409 warning: no files found matching '*.toml' under directory 'bioio' 2026-07-31T04:13:57,410 warning: no previously-included files found matching '*/tests' 2026-07-31T04:13:57,411 adding license file 'LICENSE' 2026-07-31T04:13:57,414 writing manifest file 'bioio.egg-info/SOURCES.txt' 2026-07-31T04:13:57,521 Getting requirements to build wheel: finished with status 'done' 2026-07-31T04:13:57,530 Created temporary directory: /tmp/pip-modern-metadata-c7zouy9r 2026-07-31T04:13:57,533 Preparing metadata (pyproject.toml): started 2026-07-31T04:13:57,537 Running command Preparing metadata (pyproject.toml) 2026-07-31T04:13:58,718 /tmp/pip-build-env-thoswlwn/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-31T04:13:58,718 !! 2026-07-31T04:13:58,719 ******************************************************************************** 2026-07-31T04:13:58,720 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-31T04:13:58,721 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-31T04:13:58,721 or your builds will no longer be supported. 2026-07-31T04:13:58,723 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-31T04:13:58,723 ******************************************************************************** 2026-07-31T04:13:58,724 !! 2026-07-31T04:13:58,725 corresp(dist, value, root_dir) 2026-07-31T04:13:58,806 running dist_info 2026-07-31T04:13:58,809 creating /tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info 2026-07-31T04:13:59,031 writing /tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/PKG-INFO 2026-07-31T04:13:59,039 writing dependency_links to /tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/dependency_links.txt 2026-07-31T04:13:59,042 writing requirements to /tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/requires.txt 2026-07-31T04:13:59,043 writing top-level names to /tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/top_level.txt 2026-07-31T04:13:59,045 writing manifest file '/tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/SOURCES.txt' 2026-07-31T04:13:59,063 reading manifest template 'MANIFEST.in' 2026-07-31T04:13:59,069 warning: no files found matching '*.toml' under directory 'bioio' 2026-07-31T04:13:59,070 warning: no previously-included files found matching '*/tests' 2026-07-31T04:13:59,071 adding license file 'LICENSE' 2026-07-31T04:13:59,074 writing manifest file '/tmp/pip-modern-metadata-c7zouy9r/bioio.egg-info/SOURCES.txt' 2026-07-31T04:13:59,075 creating '/tmp/pip-modern-metadata-c7zouy9r/bioio-3.5.0.dist-info' 2026-07-31T04:13:59,213 Preparing metadata (pyproject.toml): finished with status 'done' 2026-07-31T04:13:59,218 Source in /tmp/pip-wheel-5045g031/bioio_c7f4c0d931d642c89b7d5acc0f112431 has version 3.5.0, which satisfies requirement bioio==3.5.0 from https://files.pythonhosted.org/packages/45/67/f708f15f62f92e97e65f2bfb11d337486ca0916159f7b87782541fca4348/bioio-3.5.0.tar.gz 2026-07-31T04:13:59,219 Removed bioio==3.5.0 from https://files.pythonhosted.org/packages/45/67/f708f15f62f92e97e65f2bfb11d337486ca0916159f7b87782541fca4348/bioio-3.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-8o6h8j4y' 2026-07-31T04:13:59,225 Created temporary directory: /tmp/pip-unpack-8ik_3qj4 2026-07-31T04:13:59,225 Building wheels for collected packages: bioio 2026-07-31T04:13:59,230 Created temporary directory: /tmp/pip-wheel-n2qj70lj 2026-07-31T04:13:59,230 Destination directory: /tmp/pip-wheel-n2qj70lj 2026-07-31T04:13:59,233 Building wheel for bioio (pyproject.toml): started 2026-07-31T04:13:59,234 Running command Building wheel for bioio (pyproject.toml) 2026-07-31T04:13:59,928 /tmp/pip-build-env-thoswlwn/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-31T04:13:59,928 !! 2026-07-31T04:13:59,929 ******************************************************************************** 2026-07-31T04:13:59,930 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-31T04:13:59,931 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-31T04:13:59,932 or your builds will no longer be supported. 2026-07-31T04:13:59,933 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-31T04:13:59,933 ******************************************************************************** 2026-07-31T04:13:59,934 !! 2026-07-31T04:13:59,935 corresp(dist, value, root_dir) 2026-07-31T04:13:59,978 running bdist_wheel 2026-07-31T04:14:00,002 running build 2026-07-31T04:14:00,003 running build_py 2026-07-31T04:14:00,004 creating build/lib/docs 2026-07-31T04:14:00,006 copying docs/conf.py -> build/lib/docs 2026-07-31T04:14:00,009 creating build/lib/bioio 2026-07-31T04:14:00,010 copying bioio/plugins.py -> build/lib/bioio 2026-07-31T04:14:00,013 copying bioio/__init__.py -> build/lib/bioio 2026-07-31T04:14:00,015 copying bioio/array_like_reader.py -> build/lib/bioio 2026-07-31T04:14:00,019 copying bioio/bio_image.py -> build/lib/bioio 2026-07-31T04:14:00,027 copying bioio/ome_utils.py -> build/lib/bioio 2026-07-31T04:14:00,030 creating build/lib/bioio/tests 2026-07-31T04:14:00,032 copying bioio/tests/test_array_like_reader.py -> build/lib/bioio/tests 2026-07-31T04:14:00,037 copying bioio/tests/conftest.py -> build/lib/bioio/tests 2026-07-31T04:14:00,040 copying bioio/tests/__init__.py -> build/lib/bioio/tests 2026-07-31T04:14:00,042 copying bioio/tests/test_plugins.py -> build/lib/bioio/tests 2026-07-31T04:14:00,044 copying bioio/tests/test_bio_image.py -> build/lib/bioio/tests 2026-07-31T04:14:00,047 copying bioio/tests/test_writer.py -> build/lib/bioio/tests 2026-07-31T04:14:00,049 creating build/lib/bioio/writers 2026-07-31T04:14:00,050 copying bioio/writers/__init__.py -> build/lib/bioio/writers 2026-07-31T04:14:00,052 creating build/lib/bioio/tests/helpers 2026-07-31T04:14:00,053 copying bioio/tests/helpers/mock_writer.py -> build/lib/bioio/tests/helpers 2026-07-31T04:14:00,055 copying bioio/tests/helpers/mock_reader.py -> build/lib/bioio/tests/helpers 2026-07-31T04:14:00,057 running egg_info 2026-07-31T04:14:00,067 writing bioio.egg-info/PKG-INFO 2026-07-31T04:14:00,074 writing dependency_links to bioio.egg-info/dependency_links.txt 2026-07-31T04:14:00,077 writing requirements to bioio.egg-info/requires.txt 2026-07-31T04:14:00,078 writing top-level names to bioio.egg-info/top_level.txt 2026-07-31T04:14:00,090 reading manifest template 'MANIFEST.in' 2026-07-31T04:14:00,096 warning: no files found matching '*.toml' under directory 'bioio' 2026-07-31T04:14:00,097 warning: no previously-included files found matching '*/tests' 2026-07-31T04:14:00,098 adding license file 'LICENSE' 2026-07-31T04:14:00,101 writing manifest file 'bioio.egg-info/SOURCES.txt' 2026-07-31T04:14:00,109 copying docs/CHANGELOG.rst -> build/lib/docs 2026-07-31T04:14:00,111 copying docs/CODE_OF_CONDUCT.md -> build/lib/docs 2026-07-31T04:14:00,113 copying docs/CONTRIBUTING.md -> build/lib/docs 2026-07-31T04:14:00,115 copying docs/GOVERNANCE.md -> build/lib/docs 2026-07-31T04:14:00,118 copying docs/MIGRATION.md -> build/lib/docs 2026-07-31T04:14:00,120 copying docs/MISSION_AND_VALUES.md -> build/lib/docs 2026-07-31T04:14:00,123 copying docs/OVERVIEW.md -> build/lib/docs 2026-07-31T04:14:00,125 copying docs/api_reference.rst -> build/lib/docs 2026-07-31T04:14:00,127 copying docs/contributing.rst -> build/lib/docs 2026-07-31T04:14:00,129 copying docs/developer_resources.rst -> build/lib/docs 2026-07-31T04:14:00,131 copying docs/index.md -> build/lib/docs 2026-07-31T04:14:00,133 copying docs/installation.rst -> build/lib/docs 2026-07-31T04:14:00,135 copying bioio/py.typed -> build/lib/bioio 2026-07-31T04:14:00,151 installing to build/bdist.linux-armv7l/wheel 2026-07-31T04:14:00,152 running install 2026-07-31T04:14:00,175 running install_lib 2026-07-31T04:14:00,183 creating build/bdist.linux-armv7l/wheel 2026-07-31T04:14:00,186 creating build/bdist.linux-armv7l/wheel/docs 2026-07-31T04:14:00,187 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,190 copying build/lib/docs/OVERVIEW.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,195 copying build/lib/docs/CONTRIBUTING.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,200 copying build/lib/docs/api_reference.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,205 copying build/lib/docs/contributing.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,210 copying build/lib/docs/MISSION_AND_VALUES.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,217 copying build/lib/docs/developer_resources.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,222 copying build/lib/docs/GOVERNANCE.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,229 copying build/lib/docs/CHANGELOG.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,235 copying build/lib/docs/installation.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,240 copying build/lib/docs/MIGRATION.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,246 copying build/lib/docs/CODE_OF_CONDUCT.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,250 copying build/lib/docs/index.md -> build/bdist.linux-armv7l/wheel/./docs 2026-07-31T04:14:00,252 creating build/bdist.linux-armv7l/wheel/bioio 2026-07-31T04:14:00,253 copying build/lib/bioio/plugins.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,257 copying build/lib/bioio/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,261 creating build/bdist.linux-armv7l/wheel/bioio/tests 2026-07-31T04:14:00,263 copying build/lib/bioio/tests/test_array_like_reader.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,272 copying build/lib/bioio/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,493 creating build/bdist.linux-armv7l/wheel/bioio/tests/helpers 2026-07-31T04:14:00,494 copying build/lib/bioio/tests/helpers/mock_writer.py -> build/bdist.linux-armv7l/wheel/./bioio/tests/helpers 2026-07-31T04:14:00,497 copying build/lib/bioio/tests/helpers/mock_reader.py -> build/bdist.linux-armv7l/wheel/./bioio/tests/helpers 2026-07-31T04:14:00,499 copying build/lib/bioio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,500 copying build/lib/bioio/tests/test_plugins.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,502 copying build/lib/bioio/tests/test_bio_image.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,506 copying build/lib/bioio/tests/test_writer.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-07-31T04:14:00,509 copying build/lib/bioio/py.typed -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,512 copying build/lib/bioio/array_like_reader.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,516 creating build/bdist.linux-armv7l/wheel/bioio/writers 2026-07-31T04:14:00,516 copying build/lib/bioio/writers/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio/writers 2026-07-31T04:14:00,519 copying build/lib/bioio/bio_image.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,526 copying build/lib/bioio/ome_utils.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-07-31T04:14:00,529 running install_egg_info 2026-07-31T04:14:00,539 Copying bioio.egg-info to build/bdist.linux-armv7l/wheel/./bioio-3.5.0-py3.11.egg-info 2026-07-31T04:14:00,579 running install_scripts 2026-07-31T04:14:00,606 creating build/bdist.linux-armv7l/wheel/bioio-3.5.0.dist-info/WHEEL 2026-07-31T04:14:00,609 creating '/tmp/pip-wheel-n2qj70lj/.tmp-x33ruejn/bioio-3.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-07-31T04:14:00,612 adding 'bioio/__init__.py' 2026-07-31T04:14:00,614 adding 'bioio/array_like_reader.py' 2026-07-31T04:14:00,620 adding 'bioio/bio_image.py' 2026-07-31T04:14:00,622 adding 'bioio/ome_utils.py' 2026-07-31T04:14:00,625 adding 'bioio/plugins.py' 2026-07-31T04:14:00,627 adding 'bioio/py.typed' 2026-07-31T04:14:00,630 adding 'bioio/tests/__init__.py' 2026-07-31T04:14:00,632 adding 'bioio/tests/conftest.py' 2026-07-31T04:14:00,634 adding 'bioio/tests/test_array_like_reader.py' 2026-07-31T04:14:00,637 adding 'bioio/tests/test_bio_image.py' 2026-07-31T04:14:00,639 adding 'bioio/tests/test_plugins.py' 2026-07-31T04:14:00,641 adding 'bioio/tests/test_writer.py' 2026-07-31T04:14:00,646 adding 'bioio/tests/helpers/mock_reader.py' 2026-07-31T04:14:00,649 adding 'bioio/tests/helpers/mock_writer.py' 2026-07-31T04:14:00,652 adding 'bioio/writers/__init__.py' 2026-07-31T04:14:00,659 adding 'bioio-3.5.0.dist-info/licenses/LICENSE' 2026-07-31T04:14:00,663 adding 'docs/CHANGELOG.rst' 2026-07-31T04:14:00,666 adding 'docs/CODE_OF_CONDUCT.md' 2026-07-31T04:14:00,668 adding 'docs/CONTRIBUTING.md' 2026-07-31T04:14:00,671 adding 'docs/GOVERNANCE.md' 2026-07-31T04:14:00,674 adding 'docs/MIGRATION.md' 2026-07-31T04:14:00,677 adding 'docs/MISSION_AND_VALUES.md' 2026-07-31T04:14:00,681 adding 'docs/OVERVIEW.md' 2026-07-31T04:14:00,684 adding 'docs/api_reference.rst' 2026-07-31T04:14:00,687 adding 'docs/conf.py' 2026-07-31T04:14:00,690 adding 'docs/contributing.rst' 2026-07-31T04:14:00,692 adding 'docs/developer_resources.rst' 2026-07-31T04:14:00,694 adding 'docs/index.md' 2026-07-31T04:14:00,696 adding 'docs/installation.rst' 2026-07-31T04:14:00,697 adding 'bioio-3.5.0.dist-info/METADATA' 2026-07-31T04:14:00,699 adding 'bioio-3.5.0.dist-info/WHEEL' 2026-07-31T04:14:00,700 adding 'bioio-3.5.0.dist-info/top_level.txt' 2026-07-31T04:14:00,702 adding 'bioio-3.5.0.dist-info/RECORD' 2026-07-31T04:14:00,704 removing build/bdist.linux-armv7l/wheel 2026-07-31T04:14:00,844 Building wheel for bioio (pyproject.toml): finished with status 'done' 2026-07-31T04:14:00,850 Created wheel for bioio: filename=bioio-3.5.0-py3-none-any.whl size=58991 sha256=52ed9e66fd0a24406c617e3b30eb4fc4012a944d18586905ff2448ce10c410c1 2026-07-31T04:14:00,851 Stored in directory: /tmp/pip-ephem-wheel-cache-iffsix0h/wheels/45/ac/c3/62e6e4b85b1c9dc1b627a4d11256287022a0cdfe9b9596580d 2026-07-31T04:14:00,863 Successfully built bioio 2026-07-31T04:14:00,868 Removed build tracker: '/tmp/pip-build-tracker-8o6h8j4y'