2026-08-06T01:44:46,917 Created temporary directory: /tmp/pip-ephem-wheel-cache-j12jkp4u 2026-08-06T01:44:46,919 Created temporary directory: /tmp/pip-build-tracker-y429vz__ 2026-08-06T01:44:46,920 Initialized build tracking at /tmp/pip-build-tracker-y429vz__ 2026-08-06T01:44:46,920 Created build tracker: /tmp/pip-build-tracker-y429vz__ 2026-08-06T01:44:46,921 Entered build tracker: /tmp/pip-build-tracker-y429vz__ 2026-08-06T01:44:46,922 Created temporary directory: /tmp/pip-wheel-3by9k831 2026-08-06T01:44:46,925 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-06T01:44:46,927 Created temporary directory: /tmp/pip-ephem-wheel-cache-2k78pduh 2026-08-06T01:44:46,949 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-06T01:44:46,953 2 location(s) to search for versions of ga4gh-va-spec: 2026-08-06T01:44:46,953 * https://pypi.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:46,953 * https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:46,954 Fetching project page and analyzing links: https://pypi.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:46,954 Getting page https://pypi.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:46,956 Found index url https://pypi.org/simple 2026-08-06T01:44:47,183 Fetched page https://pypi.org/simple/ga4gh-va-spec/ as application/vnd.pypi.simple.v1+json 2026-08-06T01:44:47,189 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/19/98/0193ba36702117528036d926ba45cf6beb685559daa837d61ec405aecde5/ga4gh.va_spec-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,191 Found link https://files.pythonhosted.org/packages/59/ce/80bef5bf8c614460c6522b70f44bf4c528ba470df639db9bac5abe2c2635/ga4gh_va_spec-0.1.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.0 2026-08-06T01:44:47,191 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/6a/42/4d11ff68e3f45f711aea3dc2bcfdef91ef62e27ae2df3f3c16eaca9d467d/ga4gh.va_spec-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,192 Found link https://files.pythonhosted.org/packages/8c/93/94b7b559972f512bc6e181102358753d9b9b113340fafc4af78bb4999a7a/ga4gh_va_spec-0.1.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.1 2026-08-06T01:44:47,193 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/66/2e/d59a5a5367cb45f0fe81220079b7c152585430b97d68dbe4dd049cf80e93/ga4gh.va_spec-0.2.0a0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,194 Found link https://files.pythonhosted.org/packages/89/49/758a7a77a683ec127d4d7fffa5081bbc7b10ddc959af0f4622c81c74f617/ga4gh_va_spec-0.2.0a0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0a0 2026-08-06T01:44:47,195 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/09/e5/e7686769b6ffa2cdc6d285a48088a929e9c1e73f031099f4dec7c8ab98a1/ga4gh_va_spec-0.2.0a1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,196 Found link 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https://files.pythonhosted.org/packages/bd/32/ee457d5fd9f1500b40e9f1a6e9e2c7bb11adb9c6ffe13f4083e6687b456e/ga4gh_va_spec-0.4.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,202 Found link https://files.pythonhosted.org/packages/66/a2/19f6e3f88341956dd5a4e486799a3222566b4c74145f32f7f18f04e84612/ga4gh_va_spec-0.4.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.1 2026-08-06T01:44:47,203 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/8f/56/30ec07f32b9ea08f13fd03dc60dbcbaa45cdc26c9a62945cb08a0d8316f7/ga4gh_va_spec-0.4.2-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,204 Found link https://files.pythonhosted.org/packages/fd/f1/aa7f0d9b9be6a25b4b97099d519f08602883bcaf6ded0a9c643d8629522e/ga4gh_va_spec-0.4.2.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.2 2026-08-06T01:44:47,204 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/93/9f/5bcd71b216a7d88d4c90f9ef92072b62bc2a0b7a2bf38aa6c5e76df53168/ga4gh_va_spec-0.4.3-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,205 Found link https://files.pythonhosted.org/packages/87/5f/63c6dcfff61b9676c3ca999ed547f09c6f6262975b2d931919f8a33d104d/ga4gh_va_spec-0.4.3.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.3 2026-08-06T01:44:47,206 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/cc/4e/c889e3eff92753c179134416c5dbc388e7e6f4c5983b11a3065f070e72a9/ga4gh_va_spec-0.4.4-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,207 Found link 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https://files.pythonhosted.org/packages/9d/a9/44b2add68585239ed7a81e64f9484b616bc4bcbbc0664211a8c08e17b4b5/ga4gh_va_spec-0.5.0a1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,210 Found link https://files.pythonhosted.org/packages/c3/21/0bd5c24554dd9f99cda7099baf6921a2b23bf59c8cc228f27f94b844b5e3/ga4gh_va_spec-0.5.0a1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a1 2026-08-06T01:44:47,211 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/c4/a4/7e0d25b73c313cd70d51b3e7b537a31715d82e80d6ecc32694ce22b4bba7/ga4gh_va_spec-0.5.0a2-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,212 Found link https://files.pythonhosted.org/packages/41/bd/6eb49ab513b899a96223a417e539c0078b658f14809150de475123b325cf/ga4gh_va_spec-0.5.0a2.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a2 2026-08-06T01:44:47,212 Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/26/c9/f52cca4a1c28825cb57876792c3f3a0b28f4c81fc23ed30749fa2a2a496d/ga4gh_va_spec-0.5.0a3-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,213 Found link https://files.pythonhosted.org/packages/5d/e2/b4e23182ed1d389662118dd6e612f7208db2d5d5ff4e70823b501cecaf09/ga4gh_va_spec-0.5.0a3.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a3 2026-08-06T01:44:47,214 Fetching project page and analyzing links: https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:47,215 Getting page https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:47,216 Found index url https://www.piwheels.org/simple 2026-08-06T01:44:47,402 Fetched page https://www.piwheels.org/simple/ga4gh-va-spec/ as text/html 2026-08-06T01:44:47,407 Skipping link: No binaries permitted for ga4gh-va-spec: https://www.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.5.0a2-py3-none-any.whl#sha256=1e845a679624d4ff31c4ae8ec89faa48a4d13511971599af96bd5e249ab42d15 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,407 Skipping link: No binaries permitted for ga4gh-va-spec: https://www.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.5.0a1-py3-none-any.whl#sha256=2f112805f72e1d642b897f373e2481ffcc8aeda51f50b7894c2f61b27ff4fc08 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,408 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.5.0a0-py3-none-any.whl#sha256=09d4bf679d12cebc4f1f35574b47e0b0a2d4744aabe14aabddeea818f959e317 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,409 Skipping link: No binaries permitted for ga4gh-va-spec: https://www.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.4-py3-none-any.whl#sha256=61630dd762d7eb1981ab216ab85144f5ce31d479990a7eb1757e2ee158baa2b2 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,409 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.3-py3-none-any.whl#sha256=f87d7568e006ee4c7fd7fcd4969af3504b5dc5be1eccc6c8bd6ec5da208e5b53 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,410 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.0-py3-none-any.whl#sha256=2b510909c18e5b0fa66bd1e8c7219caf4041013a6fce44b501983e397353a43d (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,410 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0-py3-none-any.whl#sha256=56ca42b95d4e4abe9f2c82c471d09d7d57f81eb03cc9f074dcb40d92ae691c3c (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,411 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0a1-py3-none-any.whl#sha256=433210b527d5e260b131efd5deea3441ab9c0295675d6aef60621f8729d53c01 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,412 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.2.0a0-py3-none-any.whl#sha256=7b8f6e00b9a607843bec784da99ee486228f6cad96c7765b6a51299afb86d74b (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,412 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.1-py3-none-any.whl#sha256=6e274d2eced41895395ae3f0559c77094ad3eb07aed85f8efe833563b0f4dba9 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,413 Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.0-py3-none-any.whl#sha256=9e9e02d89981f64141688a9f5ce0b38aaa4dd9b1bf45cb485496a0c4521f2491 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10) 2026-08-06T01:44:47,413 Skipping link: not a file: https://www.piwheels.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:47,414 Skipping link: not a file: https://pypi.org/simple/ga4gh-va-spec/ 2026-08-06T01:44:47,436 Given no hashes to check 1 links for project 'ga4gh-va-spec': discarding no candidates 2026-08-06T01:44:47,455 Collecting ga4gh-va-spec==0.5.0a3 2026-08-06T01:44:47,458 Created temporary directory: /tmp/pip-unpack-a8ktw431 2026-08-06T01:44:47,606 Downloading ga4gh_va_spec-0.5.0a3.tar.gz (51 kB) 2026-08-06T01:44:47,752 Added ga4gh-va-spec==0.5.0a3 from https://files.pythonhosted.org/packages/5d/e2/b4e23182ed1d389662118dd6e612f7208db2d5d5ff4e70823b501cecaf09/ga4gh_va_spec-0.5.0a3.tar.gz to build tracker '/tmp/pip-build-tracker-y429vz__' 2026-08-06T01:44:47,759 Created temporary directory: /tmp/pip-build-env-17zrj8gm 2026-08-06T01:44:47,764 Installing build dependencies: started 2026-08-06T01:44:47,765 Running command pip subprocess to install build dependencies 2026-08-06T01:44:48,904 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-08-06T01:44:49,771 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-06T01:44:49,794 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-06T01:44:51,571 Collecting setuptools>=65.3 2026-08-06T01:44:51,572 Obtaining dependency information for setuptools>=65.3 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata 2026-08-06T01:44:51,585 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-08-06T01:44:51,941 Collecting setuptools_scm>=8 2026-08-06T01:44:51,942 Obtaining dependency information for setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata 2026-08-06T01:44:51,957 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata (6.7 kB) 2026-08-06T01:44:51,966 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-08-06T01:44:51,991 Using cached setuptools_scm-10.2.1-py3-none-any.whl (29 kB) 2026-08-06T01:44:52,097 Collecting vcs-versioning<3,>=2.0.0.dev0 2026-08-06T01:44:52,098 Obtaining dependency information for vcs-versioning<3,>=2.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata 2026-08-06T01:44:52,112 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata (1.7 kB) 2026-08-06T01:44:52,298 Collecting packaging>=20 2026-08-06T01:44:52,299 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata 2026-08-06T01:44:52,311 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata (3.6 kB) 2026-08-06T01:44:52,538 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-08-06T01:44:52,560 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-08-06T01:44:52,653 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-08-06T01:44:52,692 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-08-06T01:44:52,720 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-08-06T01:44:52,805 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-08-06T01:44:55,623 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-08-06T01:44:59,481 Creating /tmp/pip-build-env-17zrj8gm/overlay/local/bin 2026-08-06T01:44:59,483 changing mode of /tmp/pip-build-env-17zrj8gm/overlay/local/bin/vcs-versioning to 755 2026-08-06T01:44:59,614 changing mode of /tmp/pip-build-env-17zrj8gm/overlay/local/bin/setuptools-scm to 755 2026-08-06T01:44:59,643 Successfully installed packaging-26.3 setuptools-83.0.0 setuptools_scm-10.2.1 vcs-versioning-2.2.3 2026-08-06T01:44:59,939 Installing build dependencies: finished with status 'done' 2026-08-06T01:44:59,945 Getting requirements to build wheel: started 2026-08-06T01:44:59,947 Running command Getting requirements to build wheel 2026-08-06T01:45:00,703 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-06T01:45:00,703 !! 2026-08-06T01:45:00,705 ******************************************************************************** 2026-08-06T01:45:00,705 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-06T01:45:00,706 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-06T01:45:00,707 or your builds will no longer be supported. 2026-08-06T01:45:00,708 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:00,708 ******************************************************************************** 2026-08-06T01:45:00,710 !! 2026-08-06T01:45:00,710 corresp(dist, value, root_dir) 2026-08-06T01:45:00,754 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:00,755 !! 2026-08-06T01:45:00,756 ******************************************************************************** 2026-08-06T01:45:00,757 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:00,758 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:00,759 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:00,759 ******************************************************************************** 2026-08-06T01:45:00,760 !! 2026-08-06T01:45:00,760 dist._finalize_license_expression() 2026-08-06T01:45:00,761 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:00,761 !! 2026-08-06T01:45:00,762 ******************************************************************************** 2026-08-06T01:45:00,763 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:00,764 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:00,765 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:00,765 ******************************************************************************** 2026-08-06T01:45:00,766 !! 2026-08-06T01:45:00,767 self._finalize_license_expression() 2026-08-06T01:45:00,767 running egg_info 2026-08-06T01:45:00,771 writing src/ga4gh.va_spec.egg-info/PKG-INFO 2026-08-06T01:45:00,776 writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt 2026-08-06T01:45:00,779 writing requirements to src/ga4gh.va_spec.egg-info/requires.txt 2026-08-06T01:45:00,780 writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt 2026-08-06T01:45:00,826 listing git files failed - pretending there aren't any 2026-08-06T01:45:00,835 reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:00,840 adding license file 'LICENSE' 2026-08-06T01:45:00,844 writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:00,953 Getting requirements to build wheel: finished with status 'done' 2026-08-06T01:45:00,956 Created temporary directory: /tmp/pip-modern-metadata-dj0gpydo 2026-08-06T01:45:00,959 Preparing metadata (pyproject.toml): started 2026-08-06T01:45:00,960 Running command Preparing metadata (pyproject.toml) 2026-08-06T01:45:01,674 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-06T01:45:01,675 !! 2026-08-06T01:45:01,676 ******************************************************************************** 2026-08-06T01:45:01,677 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-06T01:45:01,678 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-06T01:45:01,678 or your builds will no longer be supported. 2026-08-06T01:45:01,679 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:01,680 ******************************************************************************** 2026-08-06T01:45:01,681 !! 2026-08-06T01:45:01,682 corresp(dist, value, root_dir) 2026-08-06T01:45:01,725 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:01,725 !! 2026-08-06T01:45:01,727 ******************************************************************************** 2026-08-06T01:45:01,727 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:01,729 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:01,730 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:01,730 ******************************************************************************** 2026-08-06T01:45:01,731 !! 2026-08-06T01:45:01,731 dist._finalize_license_expression() 2026-08-06T01:45:01,732 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:01,733 !! 2026-08-06T01:45:01,734 ******************************************************************************** 2026-08-06T01:45:01,734 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:01,735 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:01,736 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:01,737 ******************************************************************************** 2026-08-06T01:45:01,737 !! 2026-08-06T01:45:01,738 self._finalize_license_expression() 2026-08-06T01:45:01,741 running dist_info 2026-08-06T01:45:01,743 creating /tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info 2026-08-06T01:45:01,751 writing /tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/PKG-INFO 2026-08-06T01:45:01,756 writing dependency_links to /tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/dependency_links.txt 2026-08-06T01:45:01,759 writing requirements to /tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/requires.txt 2026-08-06T01:45:01,760 writing top-level names to /tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/top_level.txt 2026-08-06T01:45:01,762 writing manifest file '/tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:01,806 listing git files failed - pretending there aren't any 2026-08-06T01:45:01,815 reading manifest file '/tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:01,817 adding license file 'LICENSE' 2026-08-06T01:45:01,820 writing manifest file '/tmp/pip-modern-metadata-dj0gpydo/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:01,821 creating '/tmp/pip-modern-metadata-dj0gpydo/ga4gh_va_spec-0.5.0a3.dist-info' 2026-08-06T01:45:01,958 Preparing metadata (pyproject.toml): finished with status 'done' 2026-08-06T01:45:01,965 Source in /tmp/pip-wheel-3by9k831/ga4gh-va-spec_2c65aa53413344d7aa035448cc3382fe has version 0.5.0a3, which satisfies requirement ga4gh-va-spec==0.5.0a3 from https://files.pythonhosted.org/packages/5d/e2/b4e23182ed1d389662118dd6e612f7208db2d5d5ff4e70823b501cecaf09/ga4gh_va_spec-0.5.0a3.tar.gz 2026-08-06T01:45:01,966 Removed ga4gh-va-spec==0.5.0a3 from https://files.pythonhosted.org/packages/5d/e2/b4e23182ed1d389662118dd6e612f7208db2d5d5ff4e70823b501cecaf09/ga4gh_va_spec-0.5.0a3.tar.gz from build tracker '/tmp/pip-build-tracker-y429vz__' 2026-08-06T01:45:01,977 Created temporary directory: /tmp/pip-unpack-eq9ap3ak 2026-08-06T01:45:01,977 Building wheels for collected packages: ga4gh-va-spec 2026-08-06T01:45:01,982 Created temporary directory: /tmp/pip-wheel-9puo0kqd 2026-08-06T01:45:01,982 Destination directory: /tmp/pip-wheel-9puo0kqd 2026-08-06T01:45:01,985 Building wheel for ga4gh-va-spec (pyproject.toml): started 2026-08-06T01:45:01,986 Running command Building wheel for ga4gh-va-spec (pyproject.toml) 2026-08-06T01:45:02,669 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-06T01:45:02,669 !! 2026-08-06T01:45:02,671 ******************************************************************************** 2026-08-06T01:45:02,671 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-06T01:45:02,672 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-06T01:45:02,672 or your builds will no longer be supported. 2026-08-06T01:45:02,673 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:02,674 ******************************************************************************** 2026-08-06T01:45:02,675 !! 2026-08-06T01:45:02,675 corresp(dist, value, root_dir) 2026-08-06T01:45:02,712 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:02,713 !! 2026-08-06T01:45:02,714 ******************************************************************************** 2026-08-06T01:45:02,715 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:02,716 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:02,717 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:02,717 ******************************************************************************** 2026-08-06T01:45:02,718 !! 2026-08-06T01:45:02,719 dist._finalize_license_expression() 2026-08-06T01:45:02,719 /tmp/pip-build-env-17zrj8gm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-06T01:45:02,720 !! 2026-08-06T01:45:02,721 ******************************************************************************** 2026-08-06T01:45:02,721 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-06T01:45:02,722 License :: OSI Approved :: Apache Software License 2026-08-06T01:45:02,723 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-06T01:45:02,724 ******************************************************************************** 2026-08-06T01:45:02,725 !! 2026-08-06T01:45:02,726 self._finalize_license_expression() 2026-08-06T01:45:02,726 running bdist_wheel 2026-08-06T01:45:02,744 running build 2026-08-06T01:45:02,745 running build_py 2026-08-06T01:45:02,747 creating build/lib/ga4gh/va_spec 2026-08-06T01:45:02,749 copying src/ga4gh/va_spec/__init__.py -> build/lib/ga4gh/va_spec 2026-08-06T01:45:02,752 creating build/lib/ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,753 copying src/ga4gh/va_spec/aac_2017/__init__.py -> build/lib/ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,755 copying src/ga4gh/va_spec/aac_2017/models.py -> build/lib/ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,758 creating build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,759 copying src/ga4gh/va_spec/base/__init__.py -> build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,761 copying src/ga4gh/va_spec/base/enums.py -> build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,762 copying src/ga4gh/va_spec/base/validators.py -> build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,765 copying src/ga4gh/va_spec/base/domain_entities.py -> build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,767 copying src/ga4gh/va_spec/base/core.py -> build/lib/ga4gh/va_spec/base 2026-08-06T01:45:02,770 creating build/lib/ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,771 copying src/ga4gh/va_spec/ccv_2022/__init__.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,773 copying src/ga4gh/va_spec/ccv_2022/models.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,775 copying src/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/lib/ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,778 creating build/lib/ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,779 copying src/ga4gh/va_spec/acmg_2015/__init__.py -> build/lib/ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,781 copying src/ga4gh/va_spec/acmg_2015/models.py -> build/lib/ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,783 running egg_info 2026-08-06T01:45:02,790 writing src/ga4gh.va_spec.egg-info/PKG-INFO 2026-08-06T01:45:02,795 writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt 2026-08-06T01:45:02,797 writing requirements to src/ga4gh.va_spec.egg-info/requires.txt 2026-08-06T01:45:02,798 writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt 2026-08-06T01:45:02,832 listing git files failed - pretending there aren't any 2026-08-06T01:45:02,839 reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:02,843 adding license file 'LICENSE' 2026-08-06T01:45:02,846 writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt' 2026-08-06T01:45:02,867 installing to build/bdist.linux-armv7l/wheel 2026-08-06T01:45:02,868 running install 2026-08-06T01:45:02,892 running install_lib 2026-08-06T01:45:02,899 creating build/bdist.linux-armv7l/wheel 2026-08-06T01:45:02,901 creating build/bdist.linux-armv7l/wheel/ga4gh 2026-08-06T01:45:02,903 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec 2026-08-06T01:45:02,904 copying build/lib/ga4gh/va_spec/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec 2026-08-06T01:45:02,906 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,907 copying build/lib/ga4gh/va_spec/aac_2017/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,909 copying build/lib/ga4gh/va_spec/aac_2017/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017 2026-08-06T01:45:02,912 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/base 2026-08-06T01:45:02,913 copying build/lib/ga4gh/va_spec/base/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-08-06T01:45:02,915 copying build/lib/ga4gh/va_spec/base/enums.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-08-06T01:45:02,917 copying build/lib/ga4gh/va_spec/base/validators.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-08-06T01:45:02,919 copying build/lib/ga4gh/va_spec/base/domain_entities.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-08-06T01:45:02,921 copying build/lib/ga4gh/va_spec/base/core.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base 2026-08-06T01:45:02,924 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,925 copying build/lib/ga4gh/va_spec/ccv_2022/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,927 copying build/lib/ga4gh/va_spec/ccv_2022/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,929 copying build/lib/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022 2026-08-06T01:45:02,932 creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,933 copying build/lib/ga4gh/va_spec/acmg_2015/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,935 copying build/lib/ga4gh/va_spec/acmg_2015/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015 2026-08-06T01:45:02,937 running install_egg_info 2026-08-06T01:45:02,944 Copying src/ga4gh.va_spec.egg-info to build/bdist.linux-armv7l/wheel/./ga4gh.va_spec-0.5.0a3-py3.11.egg-info 2026-08-06T01:45:02,956 running install_scripts 2026-08-06T01:45:02,967 creating build/bdist.linux-armv7l/wheel/ga4gh_va_spec-0.5.0a3.dist-info/WHEEL 2026-08-06T01:45:02,970 creating '/tmp/pip-wheel-9puo0kqd/.tmp-_cmpd2rk/ga4gh_va_spec-0.5.0a3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-08-06T01:45:02,972 adding 'ga4gh/va_spec/__init__.py' 2026-08-06T01:45:02,974 adding 'ga4gh/va_spec/aac_2017/__init__.py' 2026-08-06T01:45:02,976 adding 'ga4gh/va_spec/aac_2017/models.py' 2026-08-06T01:45:02,978 adding 'ga4gh/va_spec/acmg_2015/__init__.py' 2026-08-06T01:45:02,980 adding 'ga4gh/va_spec/acmg_2015/models.py' 2026-08-06T01:45:02,982 adding 'ga4gh/va_spec/base/__init__.py' 2026-08-06T01:45:02,986 adding 'ga4gh/va_spec/base/core.py' 2026-08-06T01:45:02,988 adding 'ga4gh/va_spec/base/domain_entities.py' 2026-08-06T01:45:02,989 adding 'ga4gh/va_spec/base/enums.py' 2026-08-06T01:45:02,991 adding 'ga4gh/va_spec/base/validators.py' 2026-08-06T01:45:02,993 adding 'ga4gh/va_spec/ccv_2022/__init__.py' 2026-08-06T01:45:02,994 adding 'ga4gh/va_spec/ccv_2022/derived_evidence.py' 2026-08-06T01:45:02,996 adding 'ga4gh/va_spec/ccv_2022/models.py' 2026-08-06T01:45:02,999 adding 'ga4gh_va_spec-0.5.0a3.dist-info/licenses/LICENSE' 2026-08-06T01:45:03,002 adding 'ga4gh_va_spec-0.5.0a3.dist-info/METADATA' 2026-08-06T01:45:03,003 adding 'ga4gh_va_spec-0.5.0a3.dist-info/WHEEL' 2026-08-06T01:45:03,004 adding 'ga4gh_va_spec-0.5.0a3.dist-info/top_level.txt' 2026-08-06T01:45:03,005 adding 'ga4gh_va_spec-0.5.0a3.dist-info/RECORD' 2026-08-06T01:45:03,007 removing build/bdist.linux-armv7l/wheel 2026-08-06T01:45:03,122 Building wheel for ga4gh-va-spec (pyproject.toml): finished with status 'done' 2026-08-06T01:45:03,128 Created wheel for ga4gh-va-spec: filename=ga4gh_va_spec-0.5.0a3-py3-none-any.whl size=38436 sha256=b03ec648c5569c509c9fc6b49737fb046e928c89ab8aa22a99ed56ec9ea72416 2026-08-06T01:45:03,129 Stored in directory: /tmp/pip-ephem-wheel-cache-2k78pduh/wheels/95/e5/52/4791b082d87264a5c09b616df9da2e5bfaab75274235994f9c 2026-08-06T01:45:03,148 Successfully built ga4gh-va-spec 2026-08-06T01:45:03,152 Removed build tracker: '/tmp/pip-build-tracker-y429vz__'