2026-08-07T09:24:55,152 Created temporary directory: /tmp/pip-ephem-wheel-cache-fvf2ea9b 2026-08-07T09:24:55,154 Created temporary directory: /tmp/pip-build-tracker-wdfh2ggi 2026-08-07T09:24:55,154 Initialized build tracking at /tmp/pip-build-tracker-wdfh2ggi 2026-08-07T09:24:55,155 Created build tracker: /tmp/pip-build-tracker-wdfh2ggi 2026-08-07T09:24:55,155 Entered build tracker: /tmp/pip-build-tracker-wdfh2ggi 2026-08-07T09:24:55,156 Created temporary directory: /tmp/pip-wheel-fzu8o19z 2026-08-07T09:24:55,159 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-07T09:24:55,162 Created temporary directory: /tmp/pip-ephem-wheel-cache-wlljha2b 2026-08-07T09:24:55,183 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-07T09:24:55,187 2 location(s) to search for versions of brainglobe-atlasapi: 2026-08-07T09:24:55,187 * https://pypi.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,187 * https://www.piwheels.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,188 Fetching project page and analyzing links: https://pypi.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,189 Getting page https://pypi.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,190 Found index url https://pypi.org/simple 2026-08-07T09:24:55,417 Fetched page https://pypi.org/simple/brainglobe-atlasapi/ as application/vnd.pypi.simple.v1+json 2026-08-07T09:24:55,427 Found link https://files.pythonhosted.org/packages/94/5d/aa9e95d6061393eb9f2184e2a9fdab7d9d404ffb9e8a92555689bc696017/brainglobe-atlasapi-2.0.0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.0 2026-08-07T09:24:55,428 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/02/2d/b41a734b9d08e1e08e4090d1f3d69d880c8e11d96cf857a620264943cbb5/brainglobe_atlasapi-2.0.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,429 Found link https://files.pythonhosted.org/packages/22/6c/8007408026e0a98e0d9e7f5b2679ccacfe18c270480a09e75ff95f395ffe/brainglobe-atlasapi-2.0.1.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.1 2026-08-07T09:24:55,430 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/a6/d9/ea6b4b2e2d81d2c4d7512eb4f89d3185eb3f72acb208a81e232f00247ec1/brainglobe_atlasapi-2.0.1-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,431 Found link https://files.pythonhosted.org/packages/67/e4/e1268e42432b3be14f570730be1a3350333b8a85027c4156c4fee6057d77/brainglobe-atlasapi-2.0.2.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.2 2026-08-07T09:24:55,432 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/26/81/ff6f1ca65117f8e7ea4e840f90b77c0fbce04615f5bc52711c86ddb49ab0/brainglobe_atlasapi-2.0.2-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,433 Found link https://files.pythonhosted.org/packages/c4/0b/6907f5c2329bdadd7208a883c633c5c5da48beae9439aac0a8bc6f7aa967/brainglobe-atlasapi-2.0.3.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.3 2026-08-07T09:24:55,433 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/81/e7/b6504f081c4481580326c1eff097f5fcdda3cbcb3e467a52ed2a433f209b/brainglobe_atlasapi-2.0.3-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,434 Found link https://files.pythonhosted.org/packages/a1/05/63f30291d10561bdde617345d08a93cf222894873f3437868992c1e7e98e/brainglobe-atlasapi-2.0.4.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.4 2026-08-07T09:24:55,435 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/fc/16/86c8589b4f72708382411a9b5074572bf568b835ac9af963515cf0661b49/brainglobe_atlasapi-2.0.4-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,436 Found link https://files.pythonhosted.org/packages/89/d6/77bcf09daa8fb694f86b9544817a4f12db2f1b3f329a228e19c4d67108f9/brainglobe-atlasapi-2.0.5.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.5 2026-08-07T09:24:55,437 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/f4/90/4d74f8627c90886a5abb9cb7bc636d02c2a3bc94bf68683841695b8c4131/brainglobe_atlasapi-2.0.5-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,438 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/a8/dd/05f03d24fd57568fcd0b2125e9ce3ebf6ac6d5a94ae56d45b21d90700089/brainglobe_atlasapi-2.0.6-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,438 Found link https://files.pythonhosted.org/packages/cf/bf/0421d2ebcb609c5e5dc847b548a84a7d1d5f8bd48162663197c4391beb85/brainglobe_atlasapi-2.0.6.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.6 2026-08-07T09:24:55,439 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/42/95/25c5bd74960c52a79d19f38fcfc35962027212ceb2e96699230537590632/brainglobe_atlasapi-2.0.7-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,440 Found link https://files.pythonhosted.org/packages/d3/03/88d1e39513ab5896b4e1f42c7dfefcaf2868120bee7e6d49a31036b0ca1c/brainglobe_atlasapi-2.0.7.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.7 2026-08-07T09:24:55,440 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/d8/32/757ab720f18e94e0c005caa09820fa4dee94b1629d72e3d2f0adcedf793b/brainglobe_atlasapi-2.0.8-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,441 Found link https://files.pythonhosted.org/packages/aa/d5/69b1b23a9b3084880dea8bf60608d7a4f8f1f91af6d130de7d3d4baed153/brainglobe_atlasapi-2.0.8.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.8 2026-08-07T09:24:55,442 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/c6/a4/ca1ef1fa673e68fe02ff4893436823f91177660fba486bde4e4ae42789ac/brainglobe_atlasapi-2.0.9-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,443 Found link https://files.pythonhosted.org/packages/ba/c4/04c303eca9c85d731ec0fe4b0ffd49804d0888b51f50c4affb27ce4d6b61/brainglobe_atlasapi-2.0.9.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.9 2026-08-07T09:24:55,444 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/b4/f4/7084b45a1dcb3e88b54ac14f2f14f6e7b823d2edeb78fbe66f761408182b/brainglobe_atlasapi-2.0.10-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,445 Found link https://files.pythonhosted.org/packages/18/af/7da6df2be1e5d0e9489714f0d745cac575a8946d4bbdea4379a11b7ec43e/brainglobe_atlasapi-2.0.10.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.10 2026-08-07T09:24:55,445 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/6b/2a/46f8ff8fbf0c6f4446073d349b2c36e5601abcd087f0c43804501aa57c0d/brainglobe_atlasapi-2.0.11-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,446 Found link https://files.pythonhosted.org/packages/f0/4d/f62f6384d1dd48ecd30e3b7d73019137251c6e787a47f39870608f4d7358/brainglobe_atlasapi-2.0.11.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.11 2026-08-07T09:24:55,447 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/cf/d4/18f1ec8ae6ac6b430c2e61c0cc03eb2702b7a0d52c8c90463f946711773a/brainglobe_atlasapi-2.0.12-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,448 Found link https://files.pythonhosted.org/packages/12/b3/81c67848aef1bc57b21c6b3dc23f82ff981593547de7d50a6f871a277142/brainglobe_atlasapi-2.0.12.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.12 2026-08-07T09:24:55,449 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/b6/66/5493a41c443ca90318bfb99c8425324c37b83155a825d41c39051277b7b5/brainglobe_atlasapi-2.0.13-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,450 Found link https://files.pythonhosted.org/packages/d3/fd/563d74673847bd19702d34e93b9006b4eb7b4ff69d3b59971f1b6642b73d/brainglobe_atlasapi-2.0.13.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.13 2026-08-07T09:24:55,450 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/d7/c4/ea29e43263120216ce201cb0b15a8fa35b1f1d81d42b4aa7a10bdf45588c/brainglobe_atlasapi-2.1.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,451 Found link https://files.pythonhosted.org/packages/d4/ad/e6ff7f5d0927f2c6379b1d9092629dc14b316ccb9b1ed3704f7ec4e2e092/brainglobe_atlasapi-2.1.0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.1.0 2026-08-07T09:24:55,452 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/1f/d1/03eab2d4b6e01c783029801312af5833c27f6d0476b372dd146ba824b15d/brainglobe_atlasapi-2.2.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,453 Found link https://files.pythonhosted.org/packages/8c/1c/349d4cc81c84e1a80a74b80fcc789fb5f2f434e4d5e71e2c0bb37ae0e8d5/brainglobe_atlasapi-2.2.0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 2.2.0 2026-08-07T09:24:55,453 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/0c/30/4271b81baeaecb414e31258bb84be7f8b234e26b3e581cec786724e7df65/brainglobe_atlasapi-2.2.1-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,454 Found link https://files.pythonhosted.org/packages/ed/08/0aa505c52eceee9f76486e3734a872584d0e5f9fe764a4aa4082a1d63671/brainglobe_atlasapi-2.2.1.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 2.2.1 2026-08-07T09:24:55,455 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/90/9e/e99d0e33cb5ea06987158f834a1843dee9d64494b47d28157a86ec444691/brainglobe_atlasapi-2.3.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,456 Found link https://files.pythonhosted.org/packages/2f/d7/3d37e59dcb67e15438dee62d8382214400a0dc94364808a70e8ae269d308/brainglobe_atlasapi-2.3.0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 2.3.0 2026-08-07T09:24:55,457 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/ef/f5/a691142ac27740f64e343250ab523bf775a3be2469fd7054fe63f836918e/brainglobe_atlasapi-2.3.1-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,458 Found link https://files.pythonhosted.org/packages/3e/b0/61e9b302d54dec20eae4bf0e8e619299e493ff490e9b27c3446520d07751/brainglobe_atlasapi-2.3.1.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 2.3.1 2026-08-07T09:24:55,459 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/71/63/454914badf947e4203866502c8c2dae44449539dbd233bb79f644dd8eef0/brainglobe_atlasapi-3.0.0rc0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,460 Found link https://files.pythonhosted.org/packages/6e/3e/fe501b7778350fed2fc771fb723e00e87886be5ffc0e1e99924a82fce45d/brainglobe_atlasapi-3.0.0rc0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 3.0.0rc0 2026-08-07T09:24:55,460 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/2d/dd/0297a8648d3b6a0f0076b5a37c99a1d06ed73e64704c0217b033c379e9b6/brainglobe_atlasapi-3.0.0rc1-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,461 Found link https://files.pythonhosted.org/packages/54/23/0aaebebb2b8446f1094b5843d0b263252fb5c6a7b62ae87df4684ac82827/brainglobe_atlasapi-3.0.0rc1.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 3.0.0rc1 2026-08-07T09:24:55,462 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/c0/ab/9c20cf0ec57f2c53804b2a62b7f445b366b288bff3f3b9063f5f9884f839/brainglobe_atlasapi-3.0.0rc2-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,462 Found link https://files.pythonhosted.org/packages/34/25/09d96323a9f9b83f327e4d85e38f11e4f3adc6c99c3e85fbffb55af14ece/brainglobe_atlasapi-3.0.0rc2.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 3.0.0rc2 2026-08-07T09:24:55,463 Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/ab/86/51cfab2a934d60f7f401f138256358fe9cfb5c729b856595216972ad4c74/brainglobe_atlasapi-3.0.0rc3-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,464 Found link https://files.pythonhosted.org/packages/96/df/a65b0e1e1650b19eff4618c9142b56880b90ae6df4e76ae5748b27da7beb/brainglobe_atlasapi-3.0.0rc3.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11), version: 3.0.0rc3 2026-08-07T09:24:55,465 Fetching project page and analyzing links: https://www.piwheels.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,466 Getting page https://www.piwheels.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,467 Found index url https://www.piwheels.org/simple 2026-08-07T09:24:55,665 Fetched page https://www.piwheels.org/simple/brainglobe-atlasapi/ as text/html 2026-08-07T09:24:55,673 Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-3.0.0rc2-py3-none-any.whl#sha256=8bb9ffa4684b5f35fb482a8aa448080ef3efaddecedb80c0df60bba0864c8b2f (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,673 Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-3.0.0rc1-py3-none-any.whl#sha256=ecef86554d36570e0a1fb66c4386b4664b40b4e928c31e77b221b5e6ce4ede5e (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,674 Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-3.0.0rc0-py3-none-any.whl#sha256=f4b28699cf4a8ac76e971bb72d7241d47b8ba2988a47a1a66e3bf8355386c8c2 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,675 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.3.1-py3-none-any.whl#sha256=90b43ba175cdacc94f8be0a2a9042107c8804b778e1457957ce7d5b5ec85762f (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,675 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.2.1-py3-none-any.whl#sha256=a05ad7cca2dd62a3c22e58add2a74201b5a027956c56a160a6e482b5cefcef54 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,676 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.2.0-py3-none-any.whl#sha256=2c34bd0e73bbb0673daede8cede8b08f9da67c3e81709022626eee6ea2796343 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.11) 2026-08-07T09:24:55,676 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.1.0-py3-none-any.whl#sha256=67dce6718f40aa5357c8965375edba422ff9adda4c961a926e1fadddd12e8ebe (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,677 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.13-py3-none-any.whl#sha256=63932c1151f98da193b45df435183dff02c520a732c15c5903d9f6aff7763241 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,677 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.12-py3-none-any.whl#sha256=60ff1f1de8db738034ae20495a02327f82cacf9602a7f8fd50cc4ad73292c7eb (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,678 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.11-py3-none-any.whl#sha256=58bdac0d6770f1c6b1dbfe996f7d87fd443ff68e6e9c109fa6460a33a1946ae7 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,679 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.10-py3-none-any.whl#sha256=e55072e1d4ba4274ff3f6c6d10dbc7fee1f5ecb826cd0e2021a0d114a7f0adc4 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,679 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.9-py3-none-any.whl#sha256=67cbec299da122ffc629851066eb110f950b6e163a02d121f257b89c1f1797ea (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,680 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.8-py3-none-any.whl#sha256=0bbe4508ff53dd605545a48bf4922511bb3f65f87fd9fe9d5a31b332ddf7c748 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,681 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.7-py3-none-any.whl#sha256=cd1b23835969a6c3d600681c67279cef15a698a3cf8ad3b4157bee27138ff248 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10) 2026-08-07T09:24:55,681 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.6-py3-none-any.whl#sha256=8442140366929671318cb53f3d6cb3ce0e32a81a38010452de92ae767da3ce8f (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,682 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.5-py3-none-any.whl#sha256=cab96900cfc376f6e6574cd4a76faff1f9852825fd13a5602f7a1e2d7d72c630 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,683 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.4-py3-none-any.whl#sha256=0a7530f79c49e0c3943316ffabf7ffc0e551e85ff3080598473118f80dc2de5a (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,683 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.3-py3-none-any.whl#sha256=e09156e510d9f50b8ef4f233d9e1ff849730bc7e7c6637e6d213e3f234a524b6 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,684 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.2-py3-none-any.whl#sha256=d213d9e3582e85a7b61afbe4b42dd9d1d557b2b006fe549a46a00777a51ca3db (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,684 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.1-py3-none-any.whl#sha256=d73a30d618071567cc1cc17cc2a5c914b373403d252e2556b2c4c8460481ca92 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,684 Skipping link: No binaries permitted for brainglobe-atlasapi: https://archive1.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.0-py3-none-any.whl#sha256=08327d0766a86cc7dc8836cbced68c179e2f26baad4ae391d4440a8dd377a0f1 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9) 2026-08-07T09:24:55,685 Skipping link: not a file: https://www.piwheels.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,686 Skipping link: not a file: https://pypi.org/simple/brainglobe-atlasapi/ 2026-08-07T09:24:55,710 Given no hashes to check 1 links for project 'brainglobe-atlasapi': discarding no candidates 2026-08-07T09:24:55,730 Collecting brainglobe-atlasapi==3.0.0rc3 2026-08-07T09:24:55,732 Created temporary directory: /tmp/pip-unpack-ru3nes4u 2026-08-07T09:24:55,959 Downloading brainglobe_atlasapi-3.0.0rc3.tar.gz (74 kB) 2026-08-07T09:24:56,116 Added brainglobe-atlasapi==3.0.0rc3 from https://files.pythonhosted.org/packages/96/df/a65b0e1e1650b19eff4618c9142b56880b90ae6df4e76ae5748b27da7beb/brainglobe_atlasapi-3.0.0rc3.tar.gz to build tracker '/tmp/pip-build-tracker-wdfh2ggi' 2026-08-07T09:24:56,125 Created temporary directory: /tmp/pip-build-env-t96l0xn_ 2026-08-07T09:24:56,130 Installing build dependencies: started 2026-08-07T09:24:56,131 Running command pip subprocess to install build dependencies 2026-08-07T09:24:57,359 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-08-07T09:24:58,269 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-07T09:24:58,295 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-07T09:25:00,077 Collecting setuptools>=64 2026-08-07T09:25:00,078 Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata 2026-08-07T09:25:00,093 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-08-07T09:25:00,329 Collecting wheel 2026-08-07T09:25:00,330 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-08-07T09:25:00,344 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-08-07T09:25:00,697 Collecting setuptools_scm[toml]>=6.2 2026-08-07T09:25:00,698 Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata 2026-08-07T09:25:00,713 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl.metadata (6.7 kB) 2026-08-07T09:25:00,723 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.2.1-py3-none-any.whl#sha256=d0d73d77ef634616b1e8635e900863683b792817c0fc3ffe3424e65482e089e6 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-08-07T09:25:00,748 Using cached setuptools_scm-10.2.1-py3-none-any.whl (29 kB) 2026-08-07T09:25:00,935 Collecting packaging>=24.0 2026-08-07T09:25:00,936 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata 2026-08-07T09:25:00,949 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata (3.6 kB) 2026-08-07T09:25:01,055 Collecting vcs-versioning<3,>=2.0.0.dev0 2026-08-07T09:25:01,056 Obtaining dependency information for vcs-versioning<3,>=2.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata 2026-08-07T09:25:01,071 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl.metadata (1.7 kB) 2026-08-07T09:25:01,348 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-08-07T09:25:01,369 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-08-07T09:25:01,398 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-08-07T09:25:01,473 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-08-07T09:25:01,512 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-08-07T09:25:01,538 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-08-07T09:25:01,565 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.2.3-py3-none-any.whl (108 kB) 2026-08-07T09:25:01,657 Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-08-07T09:25:04,713 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm 2026-08-07T09:25:08,257 Creating /tmp/pip-build-env-t96l0xn_/overlay/local/bin 2026-08-07T09:25:08,260 changing mode of /tmp/pip-build-env-t96l0xn_/overlay/local/bin/wheel to 755 2026-08-07T09:25:08,660 changing mode of /tmp/pip-build-env-t96l0xn_/overlay/local/bin/vcs-versioning to 755 2026-08-07T09:25:08,795 changing mode of /tmp/pip-build-env-t96l0xn_/overlay/local/bin/setuptools-scm to 755 2026-08-07T09:25:08,831 Successfully installed packaging-26.3 setuptools-83.0.0 setuptools_scm-10.2.1 vcs-versioning-2.2.3 wheel-0.47.0 2026-08-07T09:25:09,136 Installing build dependencies: finished with status 'done' 2026-08-07T09:25:09,144 Getting requirements to build wheel: started 2026-08-07T09:25:09,145 Running command Getting requirements to build wheel 2026-08-07T09:25:09,942 /tmp/pip-build-env-t96l0xn_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-07T09:25:09,942 !! 2026-08-07T09:25:09,946 ******************************************************************************** 2026-08-07T09:25:09,946 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-07T09:25:09,947 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-07T09:25:09,948 or your builds will no longer be supported. 2026-08-07T09:25:09,949 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-07T09:25:09,949 ******************************************************************************** 2026-08-07T09:25:09,950 !! 2026-08-07T09:25:09,951 corresp(dist, value, root_dir) 2026-08-07T09:25:10,000 running egg_info 2026-08-07T09:25:10,012 writing brainglobe_atlasapi.egg-info/PKG-INFO 2026-08-07T09:25:10,022 writing dependency_links to brainglobe_atlasapi.egg-info/dependency_links.txt 2026-08-07T09:25:10,024 writing entry points to brainglobe_atlasapi.egg-info/entry_points.txt 2026-08-07T09:25:10,028 writing requirements to brainglobe_atlasapi.egg-info/requires.txt 2026-08-07T09:25:10,030 writing top-level names to brainglobe_atlasapi.egg-info/top_level.txt 2026-08-07T09:25:10,049 reading manifest template 'MANIFEST.in' 2026-08-07T09:25:10,050 warning: no files found matching 'requirements.txt' 2026-08-07T09:25:10,051 warning: no previously-included files found matching '.codecov.yml' 2026-08-07T09:25:10,052 warning: no previously-included files found matching '.pre-commit-config.yaml' 2026-08-07T09:25:10,052 warning: _ScmManifestMaker: MANIFEST.in, line 9: 'graft' expects a single 2026-08-07T09:25:10,054 no previously-included directories found matching 'atlas_scripts' 2026-08-07T09:25:10,055 no previously-included directories found matching 'tests' 2026-08-07T09:25:10,056 no previously-included directories found matching 'tools' 2026-08-07T09:25:10,056 no previously-included directories found matching 'tutorials' 2026-08-07T09:25:10,057 adding license file 'LICENSE' 2026-08-07T09:25:10,059 writing manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt' 2026-08-07T09:25:10,167 Getting requirements to build wheel: finished with status 'done' 2026-08-07T09:25:10,171 Created temporary directory: /tmp/pip-modern-metadata-6ny87m7s 2026-08-07T09:25:10,174 Preparing metadata (pyproject.toml): started 2026-08-07T09:25:10,175 Running command Preparing metadata (pyproject.toml) 2026-08-07T09:25:10,904 /tmp/pip-build-env-t96l0xn_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-07T09:25:10,904 !! 2026-08-07T09:25:10,905 ******************************************************************************** 2026-08-07T09:25:10,906 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-07T09:25:10,907 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-07T09:25:10,908 or your builds will no longer be supported. 2026-08-07T09:25:10,909 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-07T09:25:10,910 ******************************************************************************** 2026-08-07T09:25:10,911 !! 2026-08-07T09:25:10,912 corresp(dist, value, root_dir) 2026-08-07T09:25:10,970 running dist_info 2026-08-07T09:25:10,973 creating /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info 2026-08-07T09:25:10,984 writing /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/PKG-INFO 2026-08-07T09:25:10,994 writing dependency_links to /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/dependency_links.txt 2026-08-07T09:25:10,996 writing entry points to /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/entry_points.txt 2026-08-07T09:25:11,001 writing requirements to /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/requires.txt 2026-08-07T09:25:11,002 writing top-level names to /tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/top_level.txt 2026-08-07T09:25:11,005 writing manifest file '/tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/SOURCES.txt' 2026-08-07T09:25:11,020 reading manifest template 'MANIFEST.in' 2026-08-07T09:25:11,022 warning: no files found matching 'requirements.txt' 2026-08-07T09:25:11,023 warning: no previously-included files found matching '.codecov.yml' 2026-08-07T09:25:11,024 warning: no previously-included files found matching '.pre-commit-config.yaml' 2026-08-07T09:25:11,025 warning: _ScmManifestMaker: MANIFEST.in, line 9: 'graft' expects a single 2026-08-07T09:25:11,026 no previously-included directories found matching 'atlas_scripts' 2026-08-07T09:25:11,027 no previously-included directories found matching 'tests' 2026-08-07T09:25:11,028 no previously-included directories found matching 'tools' 2026-08-07T09:25:11,029 no previously-included directories found matching 'tutorials' 2026-08-07T09:25:11,030 adding license file 'LICENSE' 2026-08-07T09:25:11,034 writing manifest file '/tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi.egg-info/SOURCES.txt' 2026-08-07T09:25:11,036 creating '/tmp/pip-modern-metadata-6ny87m7s/brainglobe_atlasapi-3.0.0rc3.dist-info' 2026-08-07T09:25:11,184 Preparing metadata (pyproject.toml): finished with status 'done' 2026-08-07T09:25:11,191 Source in /tmp/pip-wheel-fzu8o19z/brainglobe-atlasapi_822ab77d59ae431c915be60d23db2ba7 has version 3.0.0rc3, which satisfies requirement brainglobe-atlasapi==3.0.0rc3 from https://files.pythonhosted.org/packages/96/df/a65b0e1e1650b19eff4618c9142b56880b90ae6df4e76ae5748b27da7beb/brainglobe_atlasapi-3.0.0rc3.tar.gz 2026-08-07T09:25:11,192 Removed brainglobe-atlasapi==3.0.0rc3 from https://files.pythonhosted.org/packages/96/df/a65b0e1e1650b19eff4618c9142b56880b90ae6df4e76ae5748b27da7beb/brainglobe_atlasapi-3.0.0rc3.tar.gz from build tracker '/tmp/pip-build-tracker-wdfh2ggi' 2026-08-07T09:25:11,202 Created temporary directory: /tmp/pip-unpack-mo1u1ody 2026-08-07T09:25:11,203 Building wheels for collected packages: brainglobe-atlasapi 2026-08-07T09:25:11,208 Created temporary directory: /tmp/pip-wheel-__1sjms3 2026-08-07T09:25:11,209 Destination directory: /tmp/pip-wheel-__1sjms3 2026-08-07T09:25:11,212 Building wheel for brainglobe-atlasapi (pyproject.toml): started 2026-08-07T09:25:11,213 Running command Building wheel for brainglobe-atlasapi (pyproject.toml) 2026-08-07T09:25:12,012 /tmp/pip-build-env-t96l0xn_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-07T09:25:12,012 !! 2026-08-07T09:25:12,013 ******************************************************************************** 2026-08-07T09:25:12,014 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-07T09:25:12,015 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-07T09:25:12,016 or your builds will no longer be supported. 2026-08-07T09:25:12,017 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-07T09:25:12,018 ******************************************************************************** 2026-08-07T09:25:12,019 !! 2026-08-07T09:25:12,019 corresp(dist, value, root_dir) 2026-08-07T09:25:12,066 running bdist_wheel 2026-08-07T09:25:12,090 running build 2026-08-07T09:25:12,091 running build_py 2026-08-07T09:25:12,093 creating build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,095 copying brainglobe_atlasapi/structure_class.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,098 copying brainglobe_atlasapi/__init__.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,100 copying brainglobe_atlasapi/structure_tree_util.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,103 copying brainglobe_atlasapi/atlas_name.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,107 copying brainglobe_atlasapi/config.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,109 copying brainglobe_atlasapi/update_atlases.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,111 copying brainglobe_atlasapi/cli.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,113 copying brainglobe_atlasapi/bg_atlas.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,116 copying brainglobe_atlasapi/list_atlases.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,119 copying brainglobe_atlasapi/descriptors.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,121 copying brainglobe_atlasapi/core.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,124 copying brainglobe_atlasapi/utils.py -> build/lib/brainglobe_atlasapi 2026-08-07T09:25:12,128 creating build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,129 copying brainglobe_atlasapi/atlas_generation/__init__.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,131 copying brainglobe_atlasapi/atlas_generation/wrapup.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,134 copying brainglobe_atlasapi/atlas_generation/stacks.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,137 copying brainglobe_atlasapi/atlas_generation/volume_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,139 copying brainglobe_atlasapi/atlas_generation/metadata_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,144 copying brainglobe_atlasapi/atlas_generation/validate_atlases.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,147 copying brainglobe_atlasapi/atlas_generation/annotation_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,150 copying brainglobe_atlasapi/atlas_generation/structures.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,153 copying brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,156 copying brainglobe_atlasapi/atlas_generation/mesh_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,159 copying brainglobe_atlasapi/atlas_generation/atlas_packaging_data.py -> build/lib/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,161 running egg_info 2026-08-07T09:25:12,175 writing brainglobe_atlasapi.egg-info/PKG-INFO 2026-08-07T09:25:12,187 writing dependency_links to brainglobe_atlasapi.egg-info/dependency_links.txt 2026-08-07T09:25:12,189 writing entry points to brainglobe_atlasapi.egg-info/entry_points.txt 2026-08-07T09:25:12,193 writing requirements to brainglobe_atlasapi.egg-info/requires.txt 2026-08-07T09:25:12,194 writing top-level names to brainglobe_atlasapi.egg-info/top_level.txt 2026-08-07T09:25:12,204 reading manifest template 'MANIFEST.in' 2026-08-07T09:25:12,205 warning: no files found matching 'requirements.txt' 2026-08-07T09:25:12,206 warning: no previously-included files found matching '.codecov.yml' 2026-08-07T09:25:12,207 warning: no previously-included files found matching '.pre-commit-config.yaml' 2026-08-07T09:25:12,207 warning: _ScmManifestMaker: MANIFEST.in, line 9: 'graft' expects a single 2026-08-07T09:25:12,209 no previously-included directories found matching 'atlas_scripts' 2026-08-07T09:25:12,209 no previously-included directories found matching 'tests' 2026-08-07T09:25:12,210 no previously-included directories found matching 'tools' 2026-08-07T09:25:12,210 no previously-included directories found matching 'tutorials' 2026-08-07T09:25:12,211 adding license file 'LICENSE' 2026-08-07T09:25:12,214 writing manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt' 2026-08-07T09:25:12,230 installing to build/bdist.linux-armv7l/wheel 2026-08-07T09:25:12,231 running install 2026-08-07T09:25:12,254 running install_lib 2026-08-07T09:25:12,262 creating build/bdist.linux-armv7l/wheel 2026-08-07T09:25:12,264 creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi 2026-08-07T09:25:12,266 copying build/lib/brainglobe_atlasapi/structure_class.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,269 copying build/lib/brainglobe_atlasapi/__init__.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,271 copying build/lib/brainglobe_atlasapi/structure_tree_util.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,273 copying build/lib/brainglobe_atlasapi/atlas_name.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,276 copying build/lib/brainglobe_atlasapi/config.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,279 creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,281 copying build/lib/brainglobe_atlasapi/atlas_generation/__init__.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,283 copying build/lib/brainglobe_atlasapi/atlas_generation/wrapup.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,286 copying build/lib/brainglobe_atlasapi/atlas_generation/stacks.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,289 copying build/lib/brainglobe_atlasapi/atlas_generation/volume_utils.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,292 copying build/lib/brainglobe_atlasapi/atlas_generation/metadata_utils.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,294 copying build/lib/brainglobe_atlasapi/atlas_generation/validate_atlases.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,297 copying build/lib/brainglobe_atlasapi/atlas_generation/annotation_utils.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,300 copying build/lib/brainglobe_atlasapi/atlas_generation/structures.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,303 copying build/lib/brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,305 copying build/lib/brainglobe_atlasapi/atlas_generation/mesh_utils.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,309 copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_packaging_data.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi/atlas_generation 2026-08-07T09:25:12,312 copying build/lib/brainglobe_atlasapi/update_atlases.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,315 copying build/lib/brainglobe_atlasapi/cli.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,317 copying build/lib/brainglobe_atlasapi/bg_atlas.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,321 copying build/lib/brainglobe_atlasapi/list_atlases.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,323 copying build/lib/brainglobe_atlasapi/descriptors.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,326 copying build/lib/brainglobe_atlasapi/core.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,330 copying build/lib/brainglobe_atlasapi/utils.py -> build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi 2026-08-07T09:25:12,333 running install_egg_info 2026-08-07T09:25:12,344 Copying brainglobe_atlasapi.egg-info to build/bdist.linux-armv7l/wheel/./brainglobe_atlasapi-3.0.0rc3-py3.11.egg-info 2026-08-07T09:25:12,363 running install_scripts 2026-08-07T09:25:12,378 creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi-3.0.0rc3.dist-info/WHEEL 2026-08-07T09:25:12,381 creating '/tmp/pip-wheel-__1sjms3/.tmp-xz16r_lz/brainglobe_atlasapi-3.0.0rc3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-08-07T09:25:12,384 adding 'brainglobe_atlasapi/__init__.py' 2026-08-07T09:25:12,387 adding 'brainglobe_atlasapi/atlas_name.py' 2026-08-07T09:25:12,390 adding 'brainglobe_atlasapi/bg_atlas.py' 2026-08-07T09:25:12,392 adding 'brainglobe_atlasapi/cli.py' 2026-08-07T09:25:12,394 adding 'brainglobe_atlasapi/config.py' 2026-08-07T09:25:12,398 adding 'brainglobe_atlasapi/core.py' 2026-08-07T09:25:12,401 adding 'brainglobe_atlasapi/descriptors.py' 2026-08-07T09:25:12,403 adding 'brainglobe_atlasapi/list_atlases.py' 2026-08-07T09:25:12,405 adding 'brainglobe_atlasapi/structure_class.py' 2026-08-07T09:25:12,407 adding 'brainglobe_atlasapi/structure_tree_util.py' 2026-08-07T09:25:12,409 adding 'brainglobe_atlasapi/update_atlases.py' 2026-08-07T09:25:12,412 adding 'brainglobe_atlasapi/utils.py' 2026-08-07T09:25:12,415 adding 'brainglobe_atlasapi/atlas_generation/__init__.py' 2026-08-07T09:25:12,417 adding 'brainglobe_atlasapi/atlas_generation/annotation_utils.py' 2026-08-07T09:25:12,420 adding 'brainglobe_atlasapi/atlas_generation/atlas_packaging_data.py' 2026-08-07T09:25:12,423 adding 'brainglobe_atlasapi/atlas_generation/mesh_utils.py' 2026-08-07T09:25:12,425 adding 'brainglobe_atlasapi/atlas_generation/metadata_utils.py' 2026-08-07T09:25:12,428 adding 'brainglobe_atlasapi/atlas_generation/stacks.py' 2026-08-07T09:25:12,430 adding 'brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py' 2026-08-07T09:25:12,432 adding 'brainglobe_atlasapi/atlas_generation/structures.py' 2026-08-07T09:25:12,435 adding 'brainglobe_atlasapi/atlas_generation/validate_atlases.py' 2026-08-07T09:25:12,438 adding 'brainglobe_atlasapi/atlas_generation/volume_utils.py' 2026-08-07T09:25:12,443 adding 'brainglobe_atlasapi/atlas_generation/wrapup.py' 2026-08-07T09:25:12,447 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/licenses/LICENSE' 2026-08-07T09:25:12,450 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/METADATA' 2026-08-07T09:25:12,452 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/WHEEL' 2026-08-07T09:25:12,453 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/entry_points.txt' 2026-08-07T09:25:12,458 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/top_level.txt' 2026-08-07T09:25:12,462 adding 'brainglobe_atlasapi-3.0.0rc3.dist-info/RECORD' 2026-08-07T09:25:12,463 removing build/bdist.linux-armv7l/wheel 2026-08-07T09:25:12,597 Building wheel for brainglobe-atlasapi (pyproject.toml): finished with status 'done' 2026-08-07T09:25:12,604 Created wheel for brainglobe-atlasapi: filename=brainglobe_atlasapi-3.0.0rc3-py3-none-any.whl size=73635 sha256=f498b2a9925e2bde5396ceedfd665459cc0b83b05f7210b17d86b5aa026936d3 2026-08-07T09:25:12,606 Stored in directory: /tmp/pip-ephem-wheel-cache-wlljha2b/wheels/28/d2/5f/ef24cff94796c7743e133299f6b2481dab890d2dba049207ff 2026-08-07T09:25:12,623 Successfully built brainglobe-atlasapi 2026-08-07T09:25:12,629 Removed build tracker: '/tmp/pip-build-tracker-wdfh2ggi'