2026-08-14T15:58:06,494 Created temporary directory: /tmp/pip-ephem-wheel-cache-cfce3434
2026-08-14T15:58:06,496 Created temporary directory: /tmp/pip-build-tracker-4by5fb2t
2026-08-14T15:58:06,497 Initialized build tracking at /tmp/pip-build-tracker-4by5fb2t
2026-08-14T15:58:06,497 Created build tracker: /tmp/pip-build-tracker-4by5fb2t
2026-08-14T15:58:06,498 Entered build tracker: /tmp/pip-build-tracker-4by5fb2t
2026-08-14T15:58:06,498 Created temporary directory: /tmp/pip-wheel-4qg9al1a
2026-08-14T15:58:06,502 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-08-14T15:58:06,504 Created temporary directory: /tmp/pip-ephem-wheel-cache-1lmm9kbg
2026-08-14T15:58:06,525 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-08-14T15:58:06,529 2 location(s) to search for versions of phyloroot:
2026-08-14T15:58:06,529 * https://pypi.org/simple/phyloroot/
2026-08-14T15:58:06,529 * https://www.piwheels.org/simple/phyloroot/
2026-08-14T15:58:06,530 Fetching project page and analyzing links: https://pypi.org/simple/phyloroot/
2026-08-14T15:58:06,531 Getting page https://pypi.org/simple/phyloroot/
2026-08-14T15:58:06,532 Found index url https://pypi.org/simple
2026-08-14T15:58:06,757 Fetched page https://pypi.org/simple/phyloroot/ as application/vnd.pypi.simple.v1+json
2026-08-14T15:58:06,760   Skipping link: No binaries permitted for phyloroot: https://files.pythonhosted.org/packages/a7/3e/318670b3509a81c926f021f1eb8713362611f028d1fe11130437f0cd3d9b/phyloroot-0.0.1-py3-none-any.whl (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,761   Found link https://files.pythonhosted.org/packages/50/56/6e7c23e9bf26b3907aae3d998d94209f49b37a8874a64df009141cd4f209/phyloroot-0.0.1.tar.gz (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7), version: 0.0.1
2026-08-14T15:58:06,761   Skipping link: No binaries permitted for phyloroot: https://files.pythonhosted.org/packages/0a/1e/a7c83bb16a972f76461501a275caa584d8b42e2709a9a042dff743e58a65/phyloroot-0.0.2-py3-none-any.whl (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,762   Found link https://files.pythonhosted.org/packages/56/cb/13ba44cf079c4e9a465286b6d84d41af74e1079b61a2bfb987b74c16e585/phyloroot-0.0.2.tar.gz (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7), version: 0.0.2
2026-08-14T15:58:06,763   Skipping link: No binaries permitted for phyloroot: https://files.pythonhosted.org/packages/a5/71/b2f90a9df31ea6fd8e41e2da2befc0bb355521bc14ad972db3c8c28a3d13/phyloroot-0.1.0-py3-none-any.whl (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,764   Found link https://files.pythonhosted.org/packages/f9/41/4e93008cb70539934cad6350cf3d2682681fc8c144aded0b5467353423b5/phyloroot-0.1.0.tar.gz (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7), version: 0.1.0
2026-08-14T15:58:06,765   Skipping link: No binaries permitted for phyloroot: https://files.pythonhosted.org/packages/71/3d/83e4ccc49e95d52f398e186f26fbb05fa1e3169c5768b841b8c24d02533d/phyloroot-0.2.0-py3-none-any.whl (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,766   Found link https://files.pythonhosted.org/packages/f0/59/fb12f0860d3d10c5ac3538fb1703a2c48e9efef68b16a9607ba74d5091dc/phyloroot-0.2.0.tar.gz (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.7), version: 0.2.0
2026-08-14T15:58:06,767   Skipping link: No binaries permitted for phyloroot: https://files.pythonhosted.org/packages/3e/e6/e76db9b0efd5f73a56b5bb938ef30e05ca7d90228ee69e5152eea9bb47b0/phyloroot-1.0.0-py3-none-any.whl (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.8)
2026-08-14T15:58:06,768   Found link https://files.pythonhosted.org/packages/c5/71/9cac59d53f7f62ce232ab42810f01ad4730c92ab8110ce5b100672646da8/phyloroot-1.0.0.tar.gz (from https://pypi.org/simple/phyloroot/) (requires-python:>=3.8), version: 1.0.0
2026-08-14T15:58:06,769 Fetching project page and analyzing links: https://www.piwheels.org/simple/phyloroot/
2026-08-14T15:58:06,769 Getting page https://www.piwheels.org/simple/phyloroot/
2026-08-14T15:58:06,770 Found index url https://www.piwheels.org/simple
2026-08-14T15:58:06,954 Fetched page https://www.piwheels.org/simple/phyloroot/ as text/html
2026-08-14T15:58:06,956   Skipping link: No binaries permitted for phyloroot: https://archive1.piwheels.org/simple/phyloroot/phyloroot-0.2.0-py3-none-any.whl#sha256=6c0fbb38ddaf6fbfc3b0e796c222a30587d11e2b8f0611a78d8a403e1b6410ce (from https://www.piwheels.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,957   Skipping link: No binaries permitted for phyloroot: https://archive1.piwheels.org/simple/phyloroot/phyloroot-0.1.0-py3-none-any.whl#sha256=2d093fe62da06bb3102b2c3bb39ce875efb0dfc6d7188221e3c47219ec7fcb01 (from https://www.piwheels.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,957   Skipping link: No binaries permitted for phyloroot: https://archive1.piwheels.org/simple/phyloroot/phyloroot-0.0.2-py3-none-any.whl#sha256=21edd3a2a1ac6b41f5fe57de6296531119c3b3565c5f944b901893d47d6d5a0a (from https://www.piwheels.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,958   Skipping link: No binaries permitted for phyloroot: https://archive1.piwheels.org/simple/phyloroot/phyloroot-0.0.1-py3-none-any.whl#sha256=4ea276b813094d8f48e11761905b237d601fdcf4bcb382e5e1d8c6f54d7ed61d (from https://www.piwheels.org/simple/phyloroot/) (requires-python:>=3.7)
2026-08-14T15:58:06,958 Skipping link: not a file: https://www.piwheels.org/simple/phyloroot/
2026-08-14T15:58:06,959 Skipping link: not a file: https://pypi.org/simple/phyloroot/
2026-08-14T15:58:06,978 Given no hashes to check 1 links for project 'phyloroot': discarding no candidates
2026-08-14T15:58:06,995 Collecting phyloroot==1.0.0
2026-08-14T15:58:06,998   Created temporary directory: /tmp/pip-unpack-3a1gobhj
2026-08-14T15:58:07,144   Downloading phyloroot-1.0.0.tar.gz (14 kB)
2026-08-14T15:58:07,200   Added phyloroot==1.0.0 from https://files.pythonhosted.org/packages/c5/71/9cac59d53f7f62ce232ab42810f01ad4730c92ab8110ce5b100672646da8/phyloroot-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-4by5fb2t'
2026-08-14T15:58:07,204   Created temporary directory: /tmp/pip-build-env-3mo8z_xj
2026-08-14T15:58:07,209   Installing build dependencies: started
2026-08-14T15:58:07,210   Running command pip subprocess to install build dependencies
2026-08-14T15:58:08,350   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-08-14T15:58:08,826   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-08-14T15:58:08,849   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-08-14T15:58:10,670   Collecting setuptools>=61.0
2026-08-14T15:58:10,671     Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata
2026-08-14T15:58:10,685     Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-08-14T15:58:10,924   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-08-14T15:58:11,015   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-08-14T15:58:13,733   Installing collected packages: setuptools
2026-08-14T15:58:16,273   Successfully installed setuptools-84.0.0
2026-08-14T15:58:16,542   Installing build dependencies: finished with status 'done'
2026-08-14T15:58:16,548   Getting requirements to build wheel: started
2026-08-14T15:58:16,550   Running command Getting requirements to build wheel
2026-08-14T15:58:17,244   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:17,245   !!

2026-08-14T15:58:17,246           ********************************************************************************
2026-08-14T15:58:17,246           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:17,247           License :: OSI Approved :: MIT License

2026-08-14T15:58:17,248           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:17,248           ********************************************************************************

2026-08-14T15:58:17,250   !!
2026-08-14T15:58:17,250     dist._finalize_license_expression()
2026-08-14T15:58:17,251   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:17,251   !!

2026-08-14T15:58:17,252           ********************************************************************************
2026-08-14T15:58:17,253           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:17,254           License :: OSI Approved :: MIT License

2026-08-14T15:58:17,255           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:17,255           ********************************************************************************

2026-08-14T15:58:17,257   !!
2026-08-14T15:58:17,257     self._finalize_license_expression()
2026-08-14T15:58:17,261   running egg_info
2026-08-14T15:58:17,267   writing src/phyloroot.egg-info/PKG-INFO
2026-08-14T15:58:17,270   writing dependency_links to src/phyloroot.egg-info/dependency_links.txt
2026-08-14T15:58:17,271   writing entry points to src/phyloroot.egg-info/entry_points.txt
2026-08-14T15:58:17,273   writing requirements to src/phyloroot.egg-info/requires.txt
2026-08-14T15:58:17,274   writing top-level names to src/phyloroot.egg-info/top_level.txt
2026-08-14T15:58:17,295   reading manifest file 'src/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:17,297   adding license file 'LICENCE'
2026-08-14T15:58:17,301   writing manifest file 'src/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:17,399   Getting requirements to build wheel: finished with status 'done'
2026-08-14T15:58:17,402   Created temporary directory: /tmp/pip-modern-metadata-c6l7zrtl
2026-08-14T15:58:17,405   Preparing metadata (pyproject.toml): started
2026-08-14T15:58:17,406   Running command Preparing metadata (pyproject.toml)
2026-08-14T15:58:18,076   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:18,076   !!

2026-08-14T15:58:18,077           ********************************************************************************
2026-08-14T15:58:18,078           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:18,079           License :: OSI Approved :: MIT License

2026-08-14T15:58:18,080           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:18,081           ********************************************************************************

2026-08-14T15:58:18,083   !!
2026-08-14T15:58:18,083     dist._finalize_license_expression()
2026-08-14T15:58:18,084   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:18,085   !!

2026-08-14T15:58:18,086           ********************************************************************************
2026-08-14T15:58:18,087           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:18,088           License :: OSI Approved :: MIT License

2026-08-14T15:58:18,089           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:18,089           ********************************************************************************

2026-08-14T15:58:18,090   !!
2026-08-14T15:58:18,091     self._finalize_license_expression()
2026-08-14T15:58:18,091   running dist_info
2026-08-14T15:58:18,101   creating /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info
2026-08-14T15:58:18,102   writing /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/PKG-INFO
2026-08-14T15:58:18,105   writing dependency_links to /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/dependency_links.txt
2026-08-14T15:58:18,107   writing entry points to /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/entry_points.txt
2026-08-14T15:58:18,108   writing requirements to /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/requires.txt
2026-08-14T15:58:18,109   writing top-level names to /tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/top_level.txt
2026-08-14T15:58:18,111   writing manifest file '/tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:18,128   reading manifest file '/tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:18,130   adding license file 'LICENCE'
2026-08-14T15:58:18,133   writing manifest file '/tmp/pip-modern-metadata-c6l7zrtl/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:18,134   creating '/tmp/pip-modern-metadata-c6l7zrtl/phyloroot-1.0.0.dist-info'
2026-08-14T15:58:18,260   Preparing metadata (pyproject.toml): finished with status 'done'
2026-08-14T15:58:18,265   Source in /tmp/pip-wheel-4qg9al1a/phyloroot_012117f02f834e5d9c474435c814416b has version 1.0.0, which satisfies requirement phyloroot==1.0.0 from https://files.pythonhosted.org/packages/c5/71/9cac59d53f7f62ce232ab42810f01ad4730c92ab8110ce5b100672646da8/phyloroot-1.0.0.tar.gz
2026-08-14T15:58:18,266   Removed phyloroot==1.0.0 from https://files.pythonhosted.org/packages/c5/71/9cac59d53f7f62ce232ab42810f01ad4730c92ab8110ce5b100672646da8/phyloroot-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-4by5fb2t'
2026-08-14T15:58:18,271 Created temporary directory: /tmp/pip-unpack-cfs0lonh
2026-08-14T15:58:18,272 Building wheels for collected packages: phyloroot
2026-08-14T15:58:18,277   Created temporary directory: /tmp/pip-wheel-a1y6hsq7
2026-08-14T15:58:18,278   Destination directory: /tmp/pip-wheel-a1y6hsq7
2026-08-14T15:58:18,281   Building wheel for phyloroot (pyproject.toml): started
2026-08-14T15:58:18,282   Running command Building wheel for phyloroot (pyproject.toml)
2026-08-14T15:58:18,903   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:18,903   !!

2026-08-14T15:58:18,904           ********************************************************************************
2026-08-14T15:58:18,905           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:18,906           License :: OSI Approved :: MIT License

2026-08-14T15:58:18,907           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:18,908           ********************************************************************************

2026-08-14T15:58:18,909   !!
2026-08-14T15:58:18,910     dist._finalize_license_expression()
2026-08-14T15:58:18,910   /tmp/pip-build-env-3mo8z_xj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-08-14T15:58:18,911   !!

2026-08-14T15:58:18,912           ********************************************************************************
2026-08-14T15:58:18,913           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-08-14T15:58:18,914           License :: OSI Approved :: MIT License

2026-08-14T15:58:18,915           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-08-14T15:58:18,915           ********************************************************************************

2026-08-14T15:58:18,916   !!
2026-08-14T15:58:18,916     self._finalize_license_expression()
2026-08-14T15:58:18,917   running bdist_wheel
2026-08-14T15:58:18,930   running build
2026-08-14T15:58:18,931   running build_py
2026-08-14T15:58:18,936   creating build/lib/phyloroot
2026-08-14T15:58:18,938   copying src/phyloroot/chain_reduction.py -> build/lib/phyloroot
2026-08-14T15:58:18,940   copying src/phyloroot/rooting_fpt_reticulation_number.py -> build/lib/phyloroot
2026-08-14T15:58:18,943   copying src/phyloroot/__init__.py -> build/lib/phyloroot
2026-08-14T15:58:18,945   copying src/phyloroot/rooting_exponential.py -> build/lib/phyloroot
2026-08-14T15:58:18,947   copying src/phyloroot/rooting_fpt_level.py -> build/lib/phyloroot
2026-08-14T15:58:18,949   copying src/phyloroot/main_cli.py -> build/lib/phyloroot
2026-08-14T15:58:18,952   copying src/phyloroot/constrained_orientation.py -> build/lib/phyloroot
2026-08-14T15:58:18,954   creating build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,955   copying src/phyloroot/class_checkers/stack_free.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,957   copying src/phyloroot/class_checkers/tree_based.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,959   copying src/phyloroot/class_checkers/orchard.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,961   copying src/phyloroot/class_checkers/all.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,963   copying src/phyloroot/class_checkers/tree_child.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,965   copying src/phyloroot/class_checkers/__init__.py -> build/lib/phyloroot/class_checkers
2026-08-14T15:58:18,966   running egg_info
2026-08-14T15:58:18,976   writing src/phyloroot.egg-info/PKG-INFO
2026-08-14T15:58:18,979   writing dependency_links to src/phyloroot.egg-info/dependency_links.txt
2026-08-14T15:58:18,980   writing entry points to src/phyloroot.egg-info/entry_points.txt
2026-08-14T15:58:18,982   writing requirements to src/phyloroot.egg-info/requires.txt
2026-08-14T15:58:18,983   writing top-level names to src/phyloroot.egg-info/top_level.txt
2026-08-14T15:58:18,992   reading manifest file 'src/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:18,995   adding license file 'LICENCE'
2026-08-14T15:58:18,998   writing manifest file 'src/phyloroot.egg-info/SOURCES.txt'
2026-08-14T15:58:19,011   installing to build/bdist.linux-armv7l/wheel
2026-08-14T15:58:19,011   running install
2026-08-14T15:58:19,034   running install_lib
2026-08-14T15:58:19,039   creating build/bdist.linux-armv7l/wheel
2026-08-14T15:58:19,041   creating build/bdist.linux-armv7l/wheel/phyloroot
2026-08-14T15:58:19,042   copying build/lib/phyloroot/chain_reduction.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,045   copying build/lib/phyloroot/rooting_fpt_reticulation_number.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,047   creating build/bdist.linux-armv7l/wheel/phyloroot/class_checkers
2026-08-14T15:58:19,049   copying build/lib/phyloroot/class_checkers/stack_free.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,051   copying build/lib/phyloroot/class_checkers/tree_based.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,053   copying build/lib/phyloroot/class_checkers/orchard.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,055   copying build/lib/phyloroot/class_checkers/all.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,057   copying build/lib/phyloroot/class_checkers/tree_child.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,058   copying build/lib/phyloroot/class_checkers/__init__.py -> build/bdist.linux-armv7l/wheel/./phyloroot/class_checkers
2026-08-14T15:58:19,060   copying build/lib/phyloroot/__init__.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,062   copying build/lib/phyloroot/rooting_exponential.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,065   copying build/lib/phyloroot/rooting_fpt_level.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,067   copying build/lib/phyloroot/main_cli.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,069   copying build/lib/phyloroot/constrained_orientation.py -> build/bdist.linux-armv7l/wheel/./phyloroot
2026-08-14T15:58:19,071   running install_egg_info
2026-08-14T15:58:19,076   Copying src/phyloroot.egg-info to build/bdist.linux-armv7l/wheel/./phyloroot-1.0.0-py3.11.egg-info
2026-08-14T15:58:19,087   running install_scripts
2026-08-14T15:58:19,099   creating build/bdist.linux-armv7l/wheel/phyloroot-1.0.0.dist-info/WHEEL
2026-08-14T15:58:19,102   creating '/tmp/pip-wheel-a1y6hsq7/.tmp-c8ynr0ua/phyloroot-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-08-14T15:58:19,105   adding 'phyloroot/__init__.py'
2026-08-14T15:58:19,106   adding 'phyloroot/chain_reduction.py'
2026-08-14T15:58:19,108   adding 'phyloroot/constrained_orientation.py'
2026-08-14T15:58:19,109   adding 'phyloroot/main_cli.py'
2026-08-14T15:58:19,111   adding 'phyloroot/rooting_exponential.py'
2026-08-14T15:58:19,113   adding 'phyloroot/rooting_fpt_level.py'
2026-08-14T15:58:19,115   adding 'phyloroot/rooting_fpt_reticulation_number.py'
2026-08-14T15:58:19,117   adding 'phyloroot/class_checkers/__init__.py'
2026-08-14T15:58:19,118   adding 'phyloroot/class_checkers/all.py'
2026-08-14T15:58:19,119   adding 'phyloroot/class_checkers/orchard.py'
2026-08-14T15:58:19,121   adding 'phyloroot/class_checkers/stack_free.py'
2026-08-14T15:58:19,122   adding 'phyloroot/class_checkers/tree_based.py'
2026-08-14T15:58:19,123   adding 'phyloroot/class_checkers/tree_child.py'
2026-08-14T15:58:19,126   adding 'phyloroot-1.0.0.dist-info/licenses/LICENCE'
2026-08-14T15:58:19,127   adding 'phyloroot-1.0.0.dist-info/METADATA'
2026-08-14T15:58:19,128   adding 'phyloroot-1.0.0.dist-info/WHEEL'
2026-08-14T15:58:19,129   adding 'phyloroot-1.0.0.dist-info/entry_points.txt'
2026-08-14T15:58:19,130   adding 'phyloroot-1.0.0.dist-info/top_level.txt'
2026-08-14T15:58:19,131   adding 'phyloroot-1.0.0.dist-info/RECORD'
2026-08-14T15:58:19,132   removing build/bdist.linux-armv7l/wheel
2026-08-14T15:58:19,237   Building wheel for phyloroot (pyproject.toml): finished with status 'done'
2026-08-14T15:58:19,242   Created wheel for phyloroot: filename=phyloroot-1.0.0-py3-none-any.whl size=17595 sha256=329c6194fce77c376f077e1009e26534ae515cf7badccee8cceac0523e0c9ef0
2026-08-14T15:58:19,243   Stored in directory: /tmp/pip-ephem-wheel-cache-1lmm9kbg/wheels/0e/a5/32/c4e7c4f0b12a91e078578396770397300bdfa670ddccdd19b1
2026-08-14T15:58:19,253 Successfully built phyloroot
2026-08-14T15:58:19,257 Removed build tracker: '/tmp/pip-build-tracker-4by5fb2t'