2026-08-21T18:14:33,849 Created temporary directory: /tmp/pip-ephem-wheel-cache-_qw1rlkj 2026-08-21T18:14:33,851 Created temporary directory: /tmp/pip-build-tracker-17_ybalu 2026-08-21T18:14:33,852 Initialized build tracking at /tmp/pip-build-tracker-17_ybalu 2026-08-21T18:14:33,852 Created build tracker: /tmp/pip-build-tracker-17_ybalu 2026-08-21T18:14:33,852 Entered build tracker: /tmp/pip-build-tracker-17_ybalu 2026-08-21T18:14:33,853 Created temporary directory: /tmp/pip-wheel-krexaabr 2026-08-21T18:14:33,856 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-21T18:14:33,858 Created temporary directory: /tmp/pip-ephem-wheel-cache-nbw9dpen 2026-08-21T18:14:33,879 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-21T18:14:33,883 2 location(s) to search for versions of bioconverters: 2026-08-21T18:14:33,883 * https://pypi.org/simple/bioconverters/ 2026-08-21T18:14:33,883 * https://www.piwheels.org/simple/bioconverters/ 2026-08-21T18:14:33,884 Fetching project page and analyzing links: https://pypi.org/simple/bioconverters/ 2026-08-21T18:14:33,884 Getting page https://pypi.org/simple/bioconverters/ 2026-08-21T18:14:33,886 Found index url https://pypi.org/simple 2026-08-21T18:14:34,118 Fetched page https://pypi.org/simple/bioconverters/ as application/vnd.pypi.simple.v1+json 2026-08-21T18:14:34,120 Skipping link: No binaries permitted for bioconverters: https://files.pythonhosted.org/packages/63/0d/11f1898f0ee36d05d52e18e0c0f597f94d2ea29f281da5b92c05e0c7640c/bioconverters-1.0.1-py3-none-any.whl (from https://pypi.org/simple/bioconverters/) (requires-python:>=3.6) 2026-08-21T18:14:34,121 Found link https://files.pythonhosted.org/packages/a7/cf/b741272a9e755a2beec1cc578feb6d35b55fd5669d70581c76d169bd2b38/bioconverters-1.0.1.tar.gz (from https://pypi.org/simple/bioconverters/) (requires-python:>=3.6), version: 1.0.1 2026-08-21T18:14:34,122 Skipping link: No binaries permitted for bioconverters: https://files.pythonhosted.org/packages/19/7d/3a4249d438d2f0bb0dfa25aa03d6b5b61e6a5b57a55c4b8b6f31d2676e06/bioconverters-2.0.0-py3-none-any.whl (from https://pypi.org/simple/bioconverters/) (requires-python:>=3.8) 2026-08-21T18:14:34,123 Found link https://files.pythonhosted.org/packages/ad/56/24e857508da53b1e39dca1842ca3da7418eafa8775d9a479cbf9ce9218fd/bioconverters-2.0.0.tar.gz (from https://pypi.org/simple/bioconverters/) (requires-python:>=3.8), version: 2.0.0 2026-08-21T18:14:34,124 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioconverters/ 2026-08-21T18:14:34,125 Getting page https://www.piwheels.org/simple/bioconverters/ 2026-08-21T18:14:34,126 Found index url https://www.piwheels.org/simple 2026-08-21T18:14:34,316 Fetched page https://www.piwheels.org/simple/bioconverters/ as text/html 2026-08-21T18:14:34,317 Skipping link: No binaries permitted for bioconverters: https://archive1.piwheels.org/simple/bioconverters/bioconverters-1.0.1-py3-none-any.whl#sha256=a6cfb619ff0f146700fa9354599dab1c7f8ae98eecbe4dde8a50dc2c0250a712 (from https://www.piwheels.org/simple/bioconverters/) (requires-python:>=3.6) 2026-08-21T18:14:34,318 Skipping link: not a file: https://www.piwheels.org/simple/bioconverters/ 2026-08-21T18:14:34,319 Skipping link: not a file: https://pypi.org/simple/bioconverters/ 2026-08-21T18:14:34,337 Given no hashes to check 1 links for project 'bioconverters': discarding no candidates 2026-08-21T18:14:34,355 Collecting bioconverters==2.0.0 2026-08-21T18:14:34,357 Created temporary directory: /tmp/pip-unpack-tcqmy3td 2026-08-21T18:14:34,512 Downloading bioconverters-2.0.0.tar.gz (33 kB) 2026-08-21T18:14:34,586 Added bioconverters==2.0.0 from https://files.pythonhosted.org/packages/ad/56/24e857508da53b1e39dca1842ca3da7418eafa8775d9a479cbf9ce9218fd/bioconverters-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-17_ybalu' 2026-08-21T18:14:34,590 Created temporary directory: /tmp/pip-build-env-_t3kt6ov 2026-08-21T18:14:34,595 Installing build dependencies: started 2026-08-21T18:14:34,596 Running command pip subprocess to install build dependencies 2026-08-21T18:14:35,764 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-08-21T18:14:36,232 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-08-21T18:14:36,255 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-08-21T18:14:38,056 Collecting setuptools>=61.0 2026-08-21T18:14:38,058 Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata 2026-08-21T18:14:38,073 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-08-21T18:14:38,313 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-08-21T18:14:38,398 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-08-21T18:14:41,160 Installing collected packages: setuptools 2026-08-21T18:14:43,496 Successfully installed setuptools-84.0.0 2026-08-21T18:14:43,766 Installing build dependencies: finished with status 'done' 2026-08-21T18:14:43,772 Getting requirements to build wheel: started 2026-08-21T18:14:43,773 Running command Getting requirements to build wheel 2026-08-21T18:14:44,375 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-21T18:14:44,375 !! 2026-08-21T18:14:44,376 ******************************************************************************** 2026-08-21T18:14:44,377 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-21T18:14:44,378 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-21T18:14:44,379 or your builds will no longer be supported. 2026-08-21T18:14:44,380 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:44,381 ******************************************************************************** 2026-08-21T18:14:44,383 !! 2026-08-21T18:14:44,383 corresp(dist, value, root_dir) 2026-08-21T18:14:44,457 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:44,457 !! 2026-08-21T18:14:44,459 ******************************************************************************** 2026-08-21T18:14:44,459 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:44,460 License :: OSI Approved :: MIT License 2026-08-21T18:14:44,461 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:44,462 ******************************************************************************** 2026-08-21T18:14:44,463 !! 2026-08-21T18:14:44,464 dist._finalize_license_expression() 2026-08-21T18:14:44,465 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:44,466 !! 2026-08-21T18:14:44,467 ******************************************************************************** 2026-08-21T18:14:44,467 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:44,468 License :: OSI Approved :: MIT License 2026-08-21T18:14:44,469 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:44,469 ******************************************************************************** 2026-08-21T18:14:44,470 !! 2026-08-21T18:14:44,471 self._finalize_license_expression() 2026-08-21T18:14:44,475 running egg_info 2026-08-21T18:14:44,481 writing bioconverters.egg-info/PKG-INFO 2026-08-21T18:14:44,486 writing dependency_links to bioconverters.egg-info/dependency_links.txt 2026-08-21T18:14:44,489 writing requirements to bioconverters.egg-info/requires.txt 2026-08-21T18:14:44,491 writing top-level names to bioconverters.egg-info/top_level.txt 2026-08-21T18:14:44,510 reading manifest file 'bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:44,513 reading manifest template 'MANIFEST.in' 2026-08-21T18:14:44,515 adding license file 'LICENSE' 2026-08-21T18:14:44,518 writing manifest file 'bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:44,617 Getting requirements to build wheel: finished with status 'done' 2026-08-21T18:14:44,620 Created temporary directory: /tmp/pip-modern-metadata-mozjsohc 2026-08-21T18:14:44,623 Preparing metadata (pyproject.toml): started 2026-08-21T18:14:44,624 Running command Preparing metadata (pyproject.toml) 2026-08-21T18:14:45,194 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-21T18:14:45,195 !! 2026-08-21T18:14:45,196 ******************************************************************************** 2026-08-21T18:14:45,197 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-21T18:14:45,198 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-21T18:14:45,199 or your builds will no longer be supported. 2026-08-21T18:14:45,200 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:45,201 ******************************************************************************** 2026-08-21T18:14:45,202 !! 2026-08-21T18:14:45,202 corresp(dist, value, root_dir) 2026-08-21T18:14:45,272 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:45,273 !! 2026-08-21T18:14:45,274 ******************************************************************************** 2026-08-21T18:14:45,275 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:45,276 License :: OSI Approved :: MIT License 2026-08-21T18:14:45,277 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:45,278 ******************************************************************************** 2026-08-21T18:14:45,279 !! 2026-08-21T18:14:45,279 dist._finalize_license_expression() 2026-08-21T18:14:45,280 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:45,281 !! 2026-08-21T18:14:45,282 ******************************************************************************** 2026-08-21T18:14:45,283 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:45,284 License :: OSI Approved :: MIT License 2026-08-21T18:14:45,285 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:45,285 ******************************************************************************** 2026-08-21T18:14:45,286 !! 2026-08-21T18:14:45,287 self._finalize_license_expression() 2026-08-21T18:14:45,287 running dist_info 2026-08-21T18:14:45,296 creating /tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info 2026-08-21T18:14:45,297 writing /tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/PKG-INFO 2026-08-21T18:14:45,302 writing dependency_links to /tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/dependency_links.txt 2026-08-21T18:14:45,304 writing requirements to /tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/requires.txt 2026-08-21T18:14:45,305 writing top-level names to /tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/top_level.txt 2026-08-21T18:14:45,307 writing manifest file '/tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:45,324 reading manifest file '/tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:45,326 reading manifest template 'MANIFEST.in' 2026-08-21T18:14:45,327 adding license file 'LICENSE' 2026-08-21T18:14:45,330 writing manifest file '/tmp/pip-modern-metadata-mozjsohc/bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:45,331 creating '/tmp/pip-modern-metadata-mozjsohc/bioconverters-2.0.0.dist-info' 2026-08-21T18:14:45,452 Preparing metadata (pyproject.toml): finished with status 'done' 2026-08-21T18:14:45,457 Source in /tmp/pip-wheel-krexaabr/bioconverters_75fc496f49684495979490cfe5513b65 has version 2.0.0, which satisfies requirement bioconverters==2.0.0 from https://files.pythonhosted.org/packages/ad/56/24e857508da53b1e39dca1842ca3da7418eafa8775d9a479cbf9ce9218fd/bioconverters-2.0.0.tar.gz 2026-08-21T18:14:45,458 Removed bioconverters==2.0.0 from https://files.pythonhosted.org/packages/ad/56/24e857508da53b1e39dca1842ca3da7418eafa8775d9a479cbf9ce9218fd/bioconverters-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-17_ybalu' 2026-08-21T18:14:45,464 Created temporary directory: /tmp/pip-unpack-rtqnec0y 2026-08-21T18:14:45,465 Building wheels for collected packages: bioconverters 2026-08-21T18:14:45,469 Created temporary directory: /tmp/pip-wheel-lsx6s14a 2026-08-21T18:14:45,469 Destination directory: /tmp/pip-wheel-lsx6s14a 2026-08-21T18:14:45,471 Building wheel for bioconverters (pyproject.toml): started 2026-08-21T18:14:45,473 Running command Building wheel for bioconverters (pyproject.toml) 2026-08-21T18:14:46,056 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-08-21T18:14:46,056 !! 2026-08-21T18:14:46,057 ******************************************************************************** 2026-08-21T18:14:46,058 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-08-21T18:14:46,059 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-08-21T18:14:46,060 or your builds will no longer be supported. 2026-08-21T18:14:46,061 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:46,062 ******************************************************************************** 2026-08-21T18:14:46,063 !! 2026-08-21T18:14:46,063 corresp(dist, value, root_dir) 2026-08-21T18:14:46,126 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:46,127 !! 2026-08-21T18:14:46,128 ******************************************************************************** 2026-08-21T18:14:46,128 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:46,129 License :: OSI Approved :: MIT License 2026-08-21T18:14:46,130 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:46,130 ******************************************************************************** 2026-08-21T18:14:46,131 !! 2026-08-21T18:14:46,132 dist._finalize_license_expression() 2026-08-21T18:14:46,132 /tmp/pip-build-env-_t3kt6ov/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-08-21T18:14:46,133 !! 2026-08-21T18:14:46,134 ******************************************************************************** 2026-08-21T18:14:46,134 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-08-21T18:14:46,135 License :: OSI Approved :: MIT License 2026-08-21T18:14:46,136 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-08-21T18:14:46,136 ******************************************************************************** 2026-08-21T18:14:46,137 !! 2026-08-21T18:14:46,138 self._finalize_license_expression() 2026-08-21T18:14:46,139 running bdist_wheel 2026-08-21T18:14:46,151 running build 2026-08-21T18:14:46,151 running build_py 2026-08-21T18:14:46,157 creating build/lib/bioconverters 2026-08-21T18:14:46,159 copying bioconverters/pmcxml.py -> build/lib/bioconverters 2026-08-21T18:14:46,162 copying bioconverters/pmc_constants.py -> build/lib/bioconverters 2026-08-21T18:14:46,164 copying bioconverters/pubmed_constants.py -> build/lib/bioconverters 2026-08-21T18:14:46,166 copying bioconverters/__init__.py -> build/lib/bioconverters 2026-08-21T18:14:46,168 copying bioconverters/pubmedxml.py -> build/lib/bioconverters 2026-08-21T18:14:46,170 copying bioconverters/utils.py -> build/lib/bioconverters 2026-08-21T18:14:46,172 running egg_info 2026-08-21T18:14:46,182 writing bioconverters.egg-info/PKG-INFO 2026-08-21T18:14:46,186 writing dependency_links to bioconverters.egg-info/dependency_links.txt 2026-08-21T18:14:46,188 writing requirements to bioconverters.egg-info/requires.txt 2026-08-21T18:14:46,189 writing top-level names to bioconverters.egg-info/top_level.txt 2026-08-21T18:14:46,197 reading manifest file 'bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:46,200 reading manifest template 'MANIFEST.in' 2026-08-21T18:14:46,200 adding license file 'LICENSE' 2026-08-21T18:14:46,204 writing manifest file 'bioconverters.egg-info/SOURCES.txt' 2026-08-21T18:14:46,215 installing to build/bdist.linux-armv7l/wheel 2026-08-21T18:14:46,215 running install 2026-08-21T18:14:46,237 running install_lib 2026-08-21T18:14:46,243 creating build/bdist.linux-armv7l/wheel 2026-08-21T18:14:46,245 creating build/bdist.linux-armv7l/wheel/bioconverters 2026-08-21T18:14:46,246 copying build/lib/bioconverters/pmcxml.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,249 copying build/lib/bioconverters/pmc_constants.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,251 copying build/lib/bioconverters/pubmed_constants.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,252 copying build/lib/bioconverters/__init__.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,254 copying build/lib/bioconverters/pubmedxml.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,256 copying build/lib/bioconverters/utils.py -> build/bdist.linux-armv7l/wheel/./bioconverters 2026-08-21T18:14:46,259 running install_egg_info 2026-08-21T18:14:46,264 Copying bioconverters.egg-info to build/bdist.linux-armv7l/wheel/./bioconverters-2.0.0-py3.11.egg-info 2026-08-21T18:14:46,273 running install_scripts 2026-08-21T18:14:46,282 creating build/bdist.linux-armv7l/wheel/bioconverters-2.0.0.dist-info/WHEEL 2026-08-21T18:14:46,284 creating '/tmp/pip-wheel-lsx6s14a/.tmp-_2hmo17p/bioconverters-2.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-08-21T18:14:46,286 adding 'bioconverters/__init__.py' 2026-08-21T18:14:46,287 adding 'bioconverters/pmc_constants.py' 2026-08-21T18:14:46,290 adding 'bioconverters/pmcxml.py' 2026-08-21T18:14:46,292 adding 'bioconverters/pubmed_constants.py' 2026-08-21T18:14:46,294 adding 'bioconverters/pubmedxml.py' 2026-08-21T18:14:46,297 adding 'bioconverters/utils.py' 2026-08-21T18:14:46,299 adding 'bioconverters-2.0.0.dist-info/licenses/LICENSE' 2026-08-21T18:14:46,301 adding 'bioconverters-2.0.0.dist-info/METADATA' 2026-08-21T18:14:46,302 adding 'bioconverters-2.0.0.dist-info/WHEEL' 2026-08-21T18:14:46,303 adding 'bioconverters-2.0.0.dist-info/top_level.txt' 2026-08-21T18:14:46,304 adding 'bioconverters-2.0.0.dist-info/RECORD' 2026-08-21T18:14:46,305 removing build/bdist.linux-armv7l/wheel 2026-08-21T18:14:46,407 Building wheel for bioconverters (pyproject.toml): finished with status 'done' 2026-08-21T18:14:46,412 Created wheel for bioconverters: filename=bioconverters-2.0.0-py3-none-any.whl size=22232 sha256=ba29425599cb5f4beef2b47ed9496b60962259118c9ebf2ec01996885a68eb84 2026-08-21T18:14:46,414 Stored in directory: /tmp/pip-ephem-wheel-cache-nbw9dpen/wheels/57/67/82/2c4934145c46fd132477cf7524abe24ce2fa22c2bc8cd3a95c 2026-08-21T18:14:46,425 Successfully built bioconverters 2026-08-21T18:14:46,428 Removed build tracker: '/tmp/pip-build-tracker-17_ybalu'