2026-09-04T13:43:32,403 Created temporary directory: /tmp/pip-ephem-wheel-cache-vka6bi8d 2026-09-04T13:43:32,405 Created temporary directory: /tmp/pip-build-tracker-u182dni4 2026-09-04T13:43:32,406 Initialized build tracking at /tmp/pip-build-tracker-u182dni4 2026-09-04T13:43:32,406 Created build tracker: /tmp/pip-build-tracker-u182dni4 2026-09-04T13:43:32,406 Entered build tracker: /tmp/pip-build-tracker-u182dni4 2026-09-04T13:43:32,407 Created temporary directory: /tmp/pip-wheel-3qa7bbkw 2026-09-04T13:43:32,410 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-09-04T13:43:32,413 Created temporary directory: /tmp/pip-ephem-wheel-cache-0u8dig4j 2026-09-04T13:43:32,440 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-09-04T13:43:32,444 2 location(s) to search for versions of ms2deepscore: 2026-09-04T13:43:32,444 * https://pypi.org/simple/ms2deepscore/ 2026-09-04T13:43:32,444 * https://www.piwheels.org/simple/ms2deepscore/ 2026-09-04T13:43:32,445 Fetching project page and analyzing links: https://pypi.org/simple/ms2deepscore/ 2026-09-04T13:43:32,446 Getting page https://pypi.org/simple/ms2deepscore/ 2026-09-04T13:43:32,447 Found index url https://pypi.org/simple 2026-09-04T13:43:32,685 Fetched page https://pypi.org/simple/ms2deepscore/ as application/vnd.pypi.simple.v1+json 2026-09-04T13:43:32,697 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/1a/74/3811b05bbe009bc9c96f2fbb4f45faad6d8412c862076677775aa9cd732c/ms2deepscore-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,698 Found link https://files.pythonhosted.org/packages/03/2a/45ece91185f3304a1b05a8c82a54fdf956b19ff4702860d0446c4f33634c/ms2deepscore-0.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.0 2026-09-04T13:43:32,699 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/58/25/baead1a09c641cf9294c4ecbd0546957d58ec5c6dc551171f67a3e51c2a9/ms2deepscore-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,700 Found link https://files.pythonhosted.org/packages/5f/8f/bc16f5973b58bc959da0949523355288fa484163032307fc632c771870a2/ms2deepscore-0.1.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.1 2026-09-04T13:43:32,700 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/3e/8e/b27fd7655be965286f69fe43bc7c4ecb0329951dfc3bb682ac69244de902/ms2deepscore-0.1.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,701 Found link https://files.pythonhosted.org/packages/d0/0e/2c0b8614641c63ed003a2091cd2a727deb2787ae164b41bbdb47ebdcf5b7/ms2deepscore-0.1.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.2 2026-09-04T13:43:32,702 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/e0/a60f69b0ce0da6ec06026a701ffcf4a5514cf7f24b7e2d5539beae9a70bf/ms2deepscore-0.1.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,703 Found link 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https://files.pythonhosted.org/packages/c2/a1/8f203ac512a44c46eff2f3956678bd0a2266c73f261f69d168d44a4844b6/ms2deepscore-0.2.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,709 Found link https://files.pythonhosted.org/packages/fa/ad/bb478c564a8d0b9b729a60c0eb8b7d8e4297144d781d7a5d0777709e656f/ms2deepscore-0.2.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.3 2026-09-04T13:43:32,710 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0e/83/d6618132d96d30ff18d6312e478bc65167919ca985e8530e1bfc9e1b6ab0/ms2deepscore-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,711 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c1/b4/582f0f136321e1441c8e9ad72300f365b432f495df5552a892e5eac3cf51/ms2deepscore-0.3.0.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,712 Found link https://files.pythonhosted.org/packages/e8/92/04692dbbb4fb9b85f85237e7eb35dbf17dc6afd4045f4e24da63ac18ac45/ms2deepscore-0.3.0.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.0.1 2026-09-04T13:43:32,712 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/73/31/eaa5bde2046120474c4d717afac0f5ab88ff83befac95ab5e98931c79421/ms2deepscore-0.3.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,713 Found link https://files.pythonhosted.org/packages/dd/d7/d4970ef86e3d5fd31d66eec3ffafcf8fb9b2a7272cfd220559628556159d/ms2deepscore-0.3.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.1 2026-09-04T13:43:32,714 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/b7/81/e956a390e9f80855be4e45b6755df79637b8440fb8ae96e852948dcc34b0/ms2deepscore-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-09-04T13:43:32,715 Found link https://files.pythonhosted.org/packages/8e/60/3d6b1ff9f4364083d9854bb090e3b2ffaacaa018985a14990a03e8a31bab/ms2deepscore-0.4.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.4.0 2026-09-04T13:43:32,716 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e3/87/cc2d5f537e0fe3c05be45b0e9b1b73a91365bb5f600040f2f3b6dd601e95/ms2deepscore-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-09-04T13:43:32,717 Found link https://files.pythonhosted.org/packages/de/e7/b0f2a802ff398551c3ed9d8980e52139fded44b2cfa73d4e5fdc05bedeb5/ms2deepscore-0.5.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.5.0 2026-09-04T13:43:32,718 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/c9/c96bc9efbc9bf1e6cd7eef199031487c66cac573a150b9ab6b9714752d3f/ms2deepscore-1.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-09-04T13:43:32,718 Found link https://files.pythonhosted.org/packages/95/24/832e3b4b5bab0842a56babde588f073dfa3283891dac80c46ae04b8b509e/ms2deepscore-1.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 1.0.0 2026-09-04T13:43:32,719 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/10/04/39bf5d75af583ee81e5e0b9c240b3c553866c174c42577006c84f22b4916/ms2deepscore-2.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-09-04T13:43:32,720 Found link https://files.pythonhosted.org/packages/06/6e/f31d145163172ba5aa08e5aef54dc0033ba3a0a2f211597b875c28b12159/ms2deepscore-2.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.0.0 2026-09-04T13:43:32,720 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/74/e5/efc479e898364a2a76f4c555ae331ba839efbf186f5a12ea71fbfbc16694/ms2deepscore-2.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-09-04T13:43:32,721 Found link https://files.pythonhosted.org/packages/be/56/ee906d7f39c9d0250ae3f8d434b707e18df28676db9a0d4acb169f0bca1b/ms2deepscore-2.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.1.0 2026-09-04T13:43:32,722 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c6/48/f25c49217e18d41f8a9f88c8d212ac471ce0f85018fd52412727cab6896f/ms2deepscore-2.2.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-09-04T13:43:32,723 Found link https://files.pythonhosted.org/packages/28/3c/e3ee8e79bc13c7ec1b0c73c8e203bef2aa8217a53da52789e267c3000c87/ms2deepscore-2.2.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.2.0 2026-09-04T13:43:32,724 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/16/bd/7ee1932266bcb9cd5d4d820d06172eab9475c13595c4c728b06b04593e18/ms2deepscore-2.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-09-04T13:43:32,725 Found link https://files.pythonhosted.org/packages/5c/48/4c0c1bf8bd30607c86dcc4e91f9dd7cc8fdcf313a65147c20e9b6caff3f6/ms2deepscore-2.3.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.3.0 2026-09-04T13:43:32,726 Skipping link: No binaries permitted for ms2deepscore: 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version: 2.5.0 2026-09-04T13:43:32,729 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/27/0b/37c7fc9604887e78a5f8e8451b09ebb00264f91b70d1d06f4400837acf1a/ms2deepscore-2.5.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-09-04T13:43:32,730 Found link https://files.pythonhosted.org/packages/c3/9d/0280da91f94b39480f2608501559b3d5609aab8d09962eefd0dde4960178/ms2deepscore-2.5.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.5.1 2026-09-04T13:43:32,731 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/1e/3d387308ad174819078b65f5e4ff5ebab0e4e703da037b805a1e5540633b/ms2deepscore-2.5.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-09-04T13:43:32,732 Found link 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version: 2.7.0 2026-09-04T13:43:32,740 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e4/7d/f08553fd823b44bc01bbedcf298257e147d303ec6a366d4fdb503de36592/ms2deepscore-2.7.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-09-04T13:43:32,741 Found link https://files.pythonhosted.org/packages/47/07/4dda15cdb1ce9bfc3e95ae0e2dc4d87c74271e51a0cf28747456e5a7536c/ms2deepscore-2.7.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.1 2026-09-04T13:43:32,742 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/aa/bc0723eb2bca0bd979257ea8da5cd7fa23ac67126865d4439acd639bcff1/ms2deepscore-2.7.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-09-04T13:43:32,742 Found link https://files.pythonhosted.org/packages/04/36/ff7ec6e470824e2c6adce30744cd84b373f9628cfa6bbc727598f5beb28f/ms2deepscore-2.7.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.2 2026-09-04T13:43:32,743 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/2b/06/0c4fe09951ffa4d0e73d93b91ea606cf0443cbc6d8f429495dde99f57769/ms2deepscore-2.8.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-09-04T13:43:32,744 Found link https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.8.0 2026-09-04T13:43:32,744 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/4a/61/8254e119557e6982c4ed88450f50e818f6e5e818041610b88640c9c9305a/ms2deepscore-2.9.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-09-04T13:43:32,745 Found link https://files.pythonhosted.org/packages/16/00/993bb989befe62792a494fea3a07c9b46cea1cf65912e7d60186c7d01cec/ms2deepscore-2.9.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.9.0 2026-09-04T13:43:32,746 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/3e/c8/1dfdfd0469adae857ba53b4fd3ceba9f4a6cc5b0a82e496839ce88167bae/ms2deepscore-2.10.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-09-04T13:43:32,746 Found link https://files.pythonhosted.org/packages/f3/8d/752ce235f6b6d3e6bd49985d4b30746eef2363dcd2ee4a4300cf8bcfdca5/ms2deepscore-2.10.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.10.0 2026-09-04T13:43:32,747 Fetching project page and analyzing links: https://www.piwheels.org/simple/ms2deepscore/ 2026-09-04T13:43:32,748 Getting page https://www.piwheels.org/simple/ms2deepscore/ 2026-09-04T13:43:32,750 Found index url https://www.piwheels.org/simple 2026-09-04T13:43:32,949 Fetched page https://www.piwheels.org/simple/ms2deepscore/ as text/html 2026-09-04T13:43:32,959 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.9.0-py3-none-any.whl#sha256=f174fecbb29ffcaa49552eb1b4c408861a0bc0433a67739eb1d35f402cd66ba9 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-09-04T13:43:32,960 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.8.0-py3-none-any.whl#sha256=1be802e6b41f262f2bb0da493d82fb5c68fc4f7f33ba319aa506245b258c9fa7 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-09-04T13:43:32,960 Skipping link: No binaries permitted for ms2deepscore: 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https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.2-py3-none-any.whl#sha256=f16ecfa3272a9106b49f9960b5ef6f44bbe1efd490e63d1299b29626ad0aba39 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,973 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.1-py3-none-any.whl#sha256=60659f71513a0c31262d829d579ac9ea0fe7419d028a4b2948c240d9bc68af8c (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,973 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.0-py3-none-any.whl#sha256=2b61bbfded0320134ac06106688abcc249c3fb70ded487bc955e70d27218cf3b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-09-04T13:43:32,974 Skipping link: not a file: https://www.piwheels.org/simple/ms2deepscore/ 2026-09-04T13:43:32,974 Skipping link: not a file: https://pypi.org/simple/ms2deepscore/ 2026-09-04T13:43:32,997 Given no hashes to check 1 links for project 'ms2deepscore': discarding no candidates 2026-09-04T13:43:33,015 Collecting ms2deepscore==2.10.0 2026-09-04T13:43:33,017 Created temporary directory: /tmp/pip-unpack-b_i35xii 2026-09-04T13:43:33,176 Downloading ms2deepscore-2.10.0.tar.gz (102 kB) 2026-09-04T13:43:33,423 Added ms2deepscore==2.10.0 from https://files.pythonhosted.org/packages/f3/8d/752ce235f6b6d3e6bd49985d4b30746eef2363dcd2ee4a4300cf8bcfdca5/ms2deepscore-2.10.0.tar.gz to build tracker '/tmp/pip-build-tracker-u182dni4' 2026-09-04T13:43:33,425 Running setup.py (path:/tmp/pip-wheel-3qa7bbkw/ms2deepscore_482a296154d840e6bd039a00557562f4/setup.py) egg_info for package ms2deepscore 2026-09-04T13:43:33,425 Created temporary directory: /tmp/pip-pip-egg-info-izok643t 2026-09-04T13:43:33,426 Preparing metadata (setup.py): started 2026-09-04T13:43:33,427 Running command python setup.py egg_info 2026-09-04T13:43:33,985 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:288: UserWarning: Unknown distribution option: 'test_suite' 2026-09-04T13:43:33,986 warnings.warn(msg) 2026-09-04T13:43:34,332 running egg_info 2026-09-04T13:43:34,359 creating /tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info 2026-09-04T13:43:34,360 writing /tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/PKG-INFO 2026-09-04T13:43:34,368 writing dependency_links to /tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/dependency_links.txt 2026-09-04T13:43:34,372 writing requirements to /tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/requires.txt 2026-09-04T13:43:34,373 writing top-level names to /tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/top_level.txt 2026-09-04T13:43:34,374 writing manifest file '/tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/SOURCES.txt' 2026-09-04T13:43:34,467 reading manifest file '/tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/SOURCES.txt' 2026-09-04T13:43:34,469 adding license file 'LICENSE' 2026-09-04T13:43:34,474 writing manifest file '/tmp/pip-pip-egg-info-izok643t/ms2deepscore.egg-info/SOURCES.txt' 2026-09-04T13:43:34,583 Preparing metadata (setup.py): finished with status 'done' 2026-09-04T13:43:34,588 Source in /tmp/pip-wheel-3qa7bbkw/ms2deepscore_482a296154d840e6bd039a00557562f4 has version 2.10.0, which satisfies requirement ms2deepscore==2.10.0 from https://files.pythonhosted.org/packages/f3/8d/752ce235f6b6d3e6bd49985d4b30746eef2363dcd2ee4a4300cf8bcfdca5/ms2deepscore-2.10.0.tar.gz 2026-09-04T13:43:34,589 Removed ms2deepscore==2.10.0 from https://files.pythonhosted.org/packages/f3/8d/752ce235f6b6d3e6bd49985d4b30746eef2363dcd2ee4a4300cf8bcfdca5/ms2deepscore-2.10.0.tar.gz from build tracker '/tmp/pip-build-tracker-u182dni4' 2026-09-04T13:43:34,595 Created temporary directory: /tmp/pip-unpack-d6tkmvn3 2026-09-04T13:43:34,596 Building wheels for collected packages: ms2deepscore 2026-09-04T13:43:34,601 Created temporary directory: /tmp/pip-wheel-h7zy_dcs 2026-09-04T13:43:34,601 Building wheel for ms2deepscore (setup.py): started 2026-09-04T13:43:34,603 Destination directory: /tmp/pip-wheel-h7zy_dcs 2026-09-04T13:43:34,603 Running command python setup.py bdist_wheel 2026-09-04T13:43:35,141 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:288: UserWarning: Unknown distribution option: 'test_suite' 2026-09-04T13:43:35,141 warnings.warn(msg) 2026-09-04T13:43:35,449 running bdist_wheel 2026-09-04T13:43:35,584 running build 2026-09-04T13:43:35,585 running build_py 2026-09-04T13:43:35,613 creating build/lib/ms2deepscore 2026-09-04T13:43:35,615 copying ms2deepscore/matchms_compat.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,618 copying ms2deepscore/fingerprint_utils.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,620 copying ms2deepscore/MS2DeepScoreONNX.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,622 copying ms2deepscore/__init__.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,624 copying ms2deepscore/MS2DeepScoreEvaluated.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,626 copying ms2deepscore/tensorize_spectra.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,628 copying ms2deepscore/utils.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,630 copying ms2deepscore/MetadataFeatureGenerator.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,632 copying ms2deepscore/fingerprint_similarity_computations.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,635 copying ms2deepscore/vector_operations.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,637 copying ms2deepscore/MS2DeepScore.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,639 copying ms2deepscore/__version__.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,641 copying ms2deepscore/SettingsMS2Deepscore.py -> build/lib/ms2deepscore 2026-09-04T13:43:35,644 creating build/lib/tests 2026-09-04T13:43:35,645 copying tests/test_MetadataFeatureGenerator.py -> build/lib/tests 2026-09-04T13:43:35,647 copying tests/test_loss_functions.py -> build/lib/tests 2026-09-04T13:43:35,649 copying tests/test_training_wrapper_function.py -> build/lib/tests 2026-09-04T13:43:35,651 copying tests/test_calculate_scores_for_validation.py -> build/lib/tests 2026-09-04T13:43:35,653 copying tests/test_siamese_spectral_model_onnx.py -> build/lib/tests 2026-09-04T13:43:35,656 copying tests/test_validation_loss_calculator.py -> build/lib/tests 2026-09-04T13:43:35,658 copying tests/test_converter_legacy.py -> build/lib/tests 2026-09-04T13:43:35,661 copying tests/test_inchikey_pair_selection.py -> build/lib/tests 2026-09-04T13:43:35,663 copying tests/test_siamese_spectra_model.py -> build/lib/tests 2026-09-04T13:43:35,665 copying tests/test_ms2deepscore_onnx.py -> build/lib/tests 2026-09-04T13:43:35,667 copying tests/test_inchikey_pair_selection_cross_ionmode.py -> build/lib/tests 2026-09-04T13:43:35,670 copying tests/__init__.py -> build/lib/tests 2026-09-04T13:43:35,672 copying tests/test_ms2deepscore_evaluated.py -> build/lib/tests 2026-09-04T13:43:35,674 copying tests/test_load_model.py -> build/lib/tests 2026-09-04T13:43:35,676 copying tests/test_ms2deepscore.py -> build/lib/tests 2026-09-04T13:43:35,678 copying tests/test_validation_and_test_split.py -> build/lib/tests 2026-09-04T13:43:35,680 copying tests/test_plotting.py -> build/lib/tests 2026-09-04T13:43:35,682 copying tests/test_PredictionsAndTanimotoScores.py -> build/lib/tests 2026-09-04T13:43:35,684 copying tests/test_fingerprint_utils.py -> build/lib/tests 2026-09-04T13:43:35,687 copying tests/test_train_ms2deepscore.py -> build/lib/tests 2026-09-04T13:43:35,689 copying tests/test_SettingsMS2deepscore.py -> build/lib/tests 2026-09-04T13:43:35,691 copying tests/test_embedding_evaluator.py -> build/lib/tests 2026-09-04T13:43:35,694 copying tests/test_fingerprint_similarity_computations.py -> build/lib/tests 2026-09-04T13:43:35,697 copying tests/test_utils.py -> build/lib/tests 2026-09-04T13:43:35,699 copying tests/test_data_augmentation.py -> build/lib/tests 2026-09-04T13:43:35,701 copying tests/conftest.py -> build/lib/tests 2026-09-04T13:43:35,703 copying tests/create_test_spectra.py -> build/lib/tests 2026-09-04T13:43:35,705 copying tests/test_data_generators.py -> build/lib/tests 2026-09-04T13:43:35,707 copying tests/test_CalculateScoresBetweenAllIonmodes.py -> build/lib/tests 2026-09-04T13:43:35,709 copying tests/test_vector_operations.py -> build/lib/tests 2026-09-04T13:43:35,712 creating build/lib/ms2deepscore/models 2026-09-04T13:43:35,713 copying ms2deepscore/models/io_utils.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,715 copying ms2deepscore/models/SiameseSpectralModelONNX.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,717 copying ms2deepscore/models/__init__.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,719 copying ms2deepscore/models/SiameseSpectralModel.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,722 copying ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,724 copying ms2deepscore/models/helper_functions.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,726 copying ms2deepscore/models/loss_functions.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,728 copying ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,730 copying ms2deepscore/models/load_model.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,732 copying ms2deepscore/models/__model_format__.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,734 copying ms2deepscore/models/legacy_model_converter.py -> build/lib/ms2deepscore/models 2026-09-04T13:43:35,736 creating build/lib/ms2deepscore/wrapper_functions 2026-09-04T13:43:35,737 copying ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions 2026-09-04T13:43:35,740 copying ms2deepscore/wrapper_functions/__init__.py -> build/lib/ms2deepscore/wrapper_functions 2026-09-04T13:43:35,741 copying ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions 2026-09-04T13:43:35,744 creating build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,745 copying ms2deepscore/train_new_model/train_ms2deepscore.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,747 copying ms2deepscore/train_new_model/validation_and_test_split.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,749 copying ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,751 copying ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,753 copying ms2deepscore/train_new_model/__init__.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,755 copying ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,757 copying ms2deepscore/train_new_model/data_augmentation.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,760 copying ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,762 copying ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/lib/ms2deepscore/train_new_model 2026-09-04T13:43:35,765 creating build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,766 copying ms2deepscore/benchmarking/__init__.py -> build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,768 copying ms2deepscore/benchmarking/plot_heatmaps.py -> build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,770 copying ms2deepscore/benchmarking/plot_average_per_bin.py -> build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,772 copying ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,774 copying ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/lib/ms2deepscore/benchmarking 2026-09-04T13:43:35,776 creating build/lib/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:35,777 copying ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:35,780 copying ms2deepscore/validation_loss_calculation/__init__.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:35,781 copying ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:35,784 copying ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:35,786 running egg_info 2026-09-04T13:43:35,813 writing ms2deepscore.egg-info/PKG-INFO 2026-09-04T13:43:35,820 writing dependency_links to ms2deepscore.egg-info/dependency_links.txt 2026-09-04T13:43:35,824 writing requirements to ms2deepscore.egg-info/requires.txt 2026-09-04T13:43:35,825 writing top-level names to ms2deepscore.egg-info/top_level.txt 2026-09-04T13:43:35,864 reading manifest file 'ms2deepscore.egg-info/SOURCES.txt' 2026-09-04T13:43:35,870 adding license file 'LICENSE' 2026-09-04T13:43:35,876 writing manifest file 'ms2deepscore.egg-info/SOURCES.txt' 2026-09-04T13:43:35,913 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-09-04T13:43:35,913 !! 2026-09-04T13:43:35,914 ******************************************************************************** 2026-09-04T13:43:35,915 Please avoid running ``setup.py`` directly. 2026-09-04T13:43:35,915 Instead, use pypa/build, pypa/installer or other 2026-09-04T13:43:35,916 standards-based tools. 2026-09-04T13:43:35,917 This deprecation is overdue, please update your project and remove deprecated 2026-09-04T13:43:35,917 calls to avoid build errors in the future. 2026-09-04T13:43:35,918 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-09-04T13:43:35,919 ******************************************************************************** 2026-09-04T13:43:35,920 !! 2026-09-04T13:43:35,920 self.initialize_options() 2026-09-04T13:43:35,941 installing to build/bdist.linux-armv7l/wheel 2026-09-04T13:43:35,942 running install 2026-09-04T13:43:35,965 running install_lib 2026-09-04T13:43:35,992 creating build/bdist.linux-armv7l/wheel 2026-09-04T13:43:35,994 creating build/bdist.linux-armv7l/wheel/ms2deepscore 2026-09-04T13:43:35,995 copying build/lib/ms2deepscore/matchms_compat.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:35,998 copying build/lib/ms2deepscore/fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,000 copying build/lib/ms2deepscore/MS2DeepScoreONNX.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,003 creating build/bdist.linux-armv7l/wheel/ms2deepscore/models 2026-09-04T13:43:36,004 copying build/lib/ms2deepscore/models/io_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,006 copying build/lib/ms2deepscore/models/SiameseSpectralModelONNX.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,008 copying build/lib/ms2deepscore/models/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,010 copying build/lib/ms2deepscore/models/SiameseSpectralModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,012 copying build/lib/ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,014 copying build/lib/ms2deepscore/models/helper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,016 copying build/lib/ms2deepscore/models/loss_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,018 copying build/lib/ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,021 copying build/lib/ms2deepscore/models/load_model.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,023 copying build/lib/ms2deepscore/models/__model_format__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,025 copying build/lib/ms2deepscore/models/legacy_model_converter.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-09-04T13:43:36,028 creating build/bdist.linux-armv7l/wheel/ms2deepscore/wrapper_functions 2026-09-04T13:43:36,029 copying build/lib/ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-09-04T13:43:36,031 copying build/lib/ms2deepscore/wrapper_functions/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-09-04T13:43:36,033 copying build/lib/ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-09-04T13:43:36,035 copying build/lib/ms2deepscore/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,038 creating build/bdist.linux-armv7l/wheel/ms2deepscore/train_new_model 2026-09-04T13:43:36,039 copying build/lib/ms2deepscore/train_new_model/train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,041 copying build/lib/ms2deepscore/train_new_model/validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,043 copying build/lib/ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,045 copying build/lib/ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,047 copying build/lib/ms2deepscore/train_new_model/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,049 copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,051 copying build/lib/ms2deepscore/train_new_model/data_augmentation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,053 copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,055 copying build/lib/ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-09-04T13:43:36,058 copying build/lib/ms2deepscore/MS2DeepScoreEvaluated.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,061 copying build/lib/ms2deepscore/tensorize_spectra.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,063 copying build/lib/ms2deepscore/utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,065 copying build/lib/ms2deepscore/MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,068 copying build/lib/ms2deepscore/fingerprint_similarity_computations.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,071 creating build/bdist.linux-armv7l/wheel/ms2deepscore/benchmarking 2026-09-04T13:43:36,072 copying build/lib/ms2deepscore/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-09-04T13:43:36,074 copying build/lib/ms2deepscore/benchmarking/plot_heatmaps.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-09-04T13:43:36,076 copying build/lib/ms2deepscore/benchmarking/plot_average_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-09-04T13:43:36,078 copying build/lib/ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-09-04T13:43:36,080 copying build/lib/ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-09-04T13:43:36,082 copying build/lib/ms2deepscore/vector_operations.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,084 copying build/lib/ms2deepscore/MS2DeepScore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,087 creating build/bdist.linux-armv7l/wheel/ms2deepscore/validation_loss_calculation 2026-09-04T13:43:36,088 copying build/lib/ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-09-04T13:43:36,091 copying build/lib/ms2deepscore/validation_loss_calculation/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-09-04T13:43:36,092 copying build/lib/ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-09-04T13:43:36,095 copying build/lib/ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-09-04T13:43:36,097 copying build/lib/ms2deepscore/__version__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,099 copying build/lib/ms2deepscore/SettingsMS2Deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-09-04T13:43:36,102 creating build/bdist.linux-armv7l/wheel/tests 2026-09-04T13:43:36,103 copying build/lib/tests/test_MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,105 copying build/lib/tests/test_loss_functions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,107 copying build/lib/tests/test_training_wrapper_function.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,109 copying build/lib/tests/test_calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,111 copying build/lib/tests/test_siamese_spectral_model_onnx.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,113 copying build/lib/tests/test_validation_loss_calculator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,116 copying build/lib/tests/test_converter_legacy.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,118 copying build/lib/tests/test_inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,120 copying build/lib/tests/test_siamese_spectra_model.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,123 copying build/lib/tests/test_ms2deepscore_onnx.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,125 copying build/lib/tests/test_inchikey_pair_selection_cross_ionmode.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,127 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,128 copying build/lib/tests/test_ms2deepscore_evaluated.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,130 copying build/lib/tests/test_load_model.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,132 copying build/lib/tests/test_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,134 copying build/lib/tests/test_validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,137 copying build/lib/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,138 copying build/lib/tests/test_PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,140 copying build/lib/tests/test_fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,143 copying build/lib/tests/test_train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,145 copying build/lib/tests/test_SettingsMS2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,147 copying build/lib/tests/test_embedding_evaluator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,149 copying build/lib/tests/test_fingerprint_similarity_computations.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,152 copying build/lib/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,154 copying build/lib/tests/test_data_augmentation.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,156 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,158 copying build/lib/tests/create_test_spectra.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,160 copying build/lib/tests/test_data_generators.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,163 copying build/lib/tests/test_CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,165 copying build/lib/tests/test_vector_operations.py -> build/bdist.linux-armv7l/wheel/./tests 2026-09-04T13:43:36,167 running install_egg_info 2026-09-04T13:43:36,201 Copying ms2deepscore.egg-info to build/bdist.linux-armv7l/wheel/./ms2deepscore-2.10.0-py3.11.egg-info 2026-09-04T13:43:36,213 running install_scripts 2026-09-04T13:43:36,225 creating build/bdist.linux-armv7l/wheel/ms2deepscore-2.10.0.dist-info/WHEEL 2026-09-04T13:43:36,227 creating '/tmp/pip-wheel-h7zy_dcs/ms2deepscore-2.10.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-09-04T13:43:36,230 adding 'ms2deepscore/MS2DeepScore.py' 2026-09-04T13:43:36,232 adding 'ms2deepscore/MS2DeepScoreEvaluated.py' 2026-09-04T13:43:36,234 adding 'ms2deepscore/MS2DeepScoreONNX.py' 2026-09-04T13:43:36,236 adding 'ms2deepscore/MetadataFeatureGenerator.py' 2026-09-04T13:43:36,239 adding 'ms2deepscore/SettingsMS2Deepscore.py' 2026-09-04T13:43:36,240 adding 'ms2deepscore/__init__.py' 2026-09-04T13:43:36,241 adding 'ms2deepscore/__version__.py' 2026-09-04T13:43:36,243 adding 'ms2deepscore/fingerprint_similarity_computations.py' 2026-09-04T13:43:36,245 adding 'ms2deepscore/fingerprint_utils.py' 2026-09-04T13:43:36,246 adding 'ms2deepscore/matchms_compat.py' 2026-09-04T13:43:36,247 adding 'ms2deepscore/tensorize_spectra.py' 2026-09-04T13:43:36,249 adding 'ms2deepscore/utils.py' 2026-09-04T13:43:36,251 adding 'ms2deepscore/vector_operations.py' 2026-09-04T13:43:36,253 adding 'ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py' 2026-09-04T13:43:36,254 adding 'ms2deepscore/benchmarking/__init__.py' 2026-09-04T13:43:36,255 adding 'ms2deepscore/benchmarking/plot_average_per_bin.py' 2026-09-04T13:43:36,257 adding 'ms2deepscore/benchmarking/plot_heatmaps.py' 2026-09-04T13:43:36,258 adding 'ms2deepscore/benchmarking/plot_loss_per_bin.py' 2026-09-04T13:43:36,261 adding 'ms2deepscore/models/EmbeddingEvaluatorModel.py' 2026-09-04T13:43:36,262 adding 'ms2deepscore/models/LinearEmbeddingEvaluation.py' 2026-09-04T13:43:36,265 adding 'ms2deepscore/models/SiameseSpectralModel.py' 2026-09-04T13:43:36,266 adding 'ms2deepscore/models/SiameseSpectralModelONNX.py' 2026-09-04T13:43:36,268 adding 'ms2deepscore/models/__init__.py' 2026-09-04T13:43:36,269 adding 'ms2deepscore/models/__model_format__.py' 2026-09-04T13:43:36,270 adding 'ms2deepscore/models/helper_functions.py' 2026-09-04T13:43:36,272 adding 'ms2deepscore/models/io_utils.py' 2026-09-04T13:43:36,273 adding 'ms2deepscore/models/legacy_model_converter.py' 2026-09-04T13:43:36,275 adding 'ms2deepscore/models/load_model.py' 2026-09-04T13:43:36,276 adding 'ms2deepscore/models/loss_functions.py' 2026-09-04T13:43:36,278 adding 'ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py' 2026-09-04T13:43:36,280 adding 'ms2deepscore/train_new_model/SpectrumPairGenerator.py' 2026-09-04T13:43:36,281 adding 'ms2deepscore/train_new_model/TrainingBatchGenerator.py' 2026-09-04T13:43:36,283 adding 'ms2deepscore/train_new_model/__init__.py' 2026-09-04T13:43:36,284 adding 'ms2deepscore/train_new_model/data_augmentation.py' 2026-09-04T13:43:36,287 adding 'ms2deepscore/train_new_model/inchikey_pair_selection.py' 2026-09-04T13:43:36,289 adding 'ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py' 2026-09-04T13:43:36,290 adding 'ms2deepscore/train_new_model/train_ms2deepscore.py' 2026-09-04T13:43:36,291 adding 'ms2deepscore/train_new_model/validation_and_test_split.py' 2026-09-04T13:43:36,294 adding 'ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py' 2026-09-04T13:43:36,296 adding 'ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py' 2026-09-04T13:43:36,297 adding 'ms2deepscore/validation_loss_calculation/__init__.py' 2026-09-04T13:43:36,298 adding 'ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py' 2026-09-04T13:43:36,300 adding 'ms2deepscore/wrapper_functions/__init__.py' 2026-09-04T13:43:36,301 adding 'ms2deepscore/wrapper_functions/plotting_wrapper_functions.py' 2026-09-04T13:43:36,303 adding 'ms2deepscore/wrapper_functions/training_wrapper_functions.py' 2026-09-04T13:43:36,307 adding 'ms2deepscore-2.10.0.dist-info/licenses/LICENSE' 2026-09-04T13:43:36,309 adding 'tests/__init__.py' 2026-09-04T13:43:36,310 adding 'tests/conftest.py' 2026-09-04T13:43:36,311 adding 'tests/create_test_spectra.py' 2026-09-04T13:43:36,312 adding 'tests/test_CalculateScoresBetweenAllIonmodes.py' 2026-09-04T13:43:36,313 adding 'tests/test_MetadataFeatureGenerator.py' 2026-09-04T13:43:36,315 adding 'tests/test_PredictionsAndTanimotoScores.py' 2026-09-04T13:43:36,316 adding 'tests/test_SettingsMS2deepscore.py' 2026-09-04T13:43:36,318 adding 'tests/test_calculate_scores_for_validation.py' 2026-09-04T13:43:36,319 adding 'tests/test_converter_legacy.py' 2026-09-04T13:43:36,321 adding 'tests/test_data_augmentation.py' 2026-09-04T13:43:36,323 adding 'tests/test_data_generators.py' 2026-09-04T13:43:36,324 adding 'tests/test_embedding_evaluator.py' 2026-09-04T13:43:36,327 adding 'tests/test_fingerprint_similarity_computations.py' 2026-09-04T13:43:36,328 adding 'tests/test_fingerprint_utils.py' 2026-09-04T13:43:36,330 adding 'tests/test_inchikey_pair_selection.py' 2026-09-04T13:43:36,332 adding 'tests/test_inchikey_pair_selection_cross_ionmode.py' 2026-09-04T13:43:36,333 adding 'tests/test_load_model.py' 2026-09-04T13:43:36,335 adding 'tests/test_loss_functions.py' 2026-09-04T13:43:36,336 adding 'tests/test_ms2deepscore.py' 2026-09-04T13:43:36,337 adding 'tests/test_ms2deepscore_evaluated.py' 2026-09-04T13:43:36,339 adding 'tests/test_ms2deepscore_onnx.py' 2026-09-04T13:43:36,340 adding 'tests/test_plotting.py' 2026-09-04T13:43:36,342 adding 'tests/test_siamese_spectra_model.py' 2026-09-04T13:43:36,343 adding 'tests/test_siamese_spectral_model_onnx.py' 2026-09-04T13:43:36,345 adding 'tests/test_train_ms2deepscore.py' 2026-09-04T13:43:36,346 adding 'tests/test_training_wrapper_function.py' 2026-09-04T13:43:36,347 adding 'tests/test_utils.py' 2026-09-04T13:43:36,349 adding 'tests/test_validation_and_test_split.py' 2026-09-04T13:43:36,351 adding 'tests/test_validation_loss_calculator.py' 2026-09-04T13:43:36,352 adding 'tests/test_vector_operations.py' 2026-09-04T13:43:36,354 adding 'ms2deepscore-2.10.0.dist-info/METADATA' 2026-09-04T13:43:36,355 adding 'ms2deepscore-2.10.0.dist-info/WHEEL' 2026-09-04T13:43:36,356 adding 'ms2deepscore-2.10.0.dist-info/top_level.txt' 2026-09-04T13:43:36,358 adding 'ms2deepscore-2.10.0.dist-info/RECORD' 2026-09-04T13:43:36,361 removing build/bdist.linux-armv7l/wheel 2026-09-04T13:43:36,492 Building wheel for ms2deepscore (setup.py): finished with status 'done' 2026-09-04T13:43:36,496 Created wheel for ms2deepscore: filename=ms2deepscore-2.10.0-py3-none-any.whl size=130002 sha256=0ce9556e7db4ea5d9a5647fa65225122bdb624e51271b5964b5338bf191b5ca2 2026-09-04T13:43:36,497 Stored in directory: /tmp/pip-ephem-wheel-cache-0u8dig4j/wheels/cd/e4/80/0b55875e674b5a3420c13b3a1e6ec7a2ade59f8251f38c8f84 2026-09-04T13:43:36,512 Successfully built ms2deepscore 2026-09-04T13:43:36,518 Removed build tracker: '/tmp/pip-build-tracker-u182dni4'