2026-09-14T17:00:23,064 Created temporary directory: /tmp/pip-ephem-wheel-cache-ghzgq97g 2026-09-14T17:00:23,066 Created temporary directory: /tmp/pip-build-tracker-943uh9w_ 2026-09-14T17:00:23,067 Initialized build tracking at /tmp/pip-build-tracker-943uh9w_ 2026-09-14T17:00:23,067 Created build tracker: /tmp/pip-build-tracker-943uh9w_ 2026-09-14T17:00:23,067 Entered build tracker: /tmp/pip-build-tracker-943uh9w_ 2026-09-14T17:00:23,068 Created temporary directory: /tmp/pip-wheel-4kwo92h7 2026-09-14T17:00:23,071 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-09-14T17:00:23,074 Created temporary directory: /tmp/pip-ephem-wheel-cache-k2oe3od1 2026-09-14T17:00:23,095 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-09-14T17:00:23,099 2 location(s) to search for versions of mmcif-utils: 2026-09-14T17:00:23,099 * https://pypi.org/simple/mmcif-utils/ 2026-09-14T17:00:23,099 * https://www.piwheels.org/simple/mmcif-utils/ 2026-09-14T17:00:23,099 Fetching project page and analyzing links: https://pypi.org/simple/mmcif-utils/ 2026-09-14T17:00:23,100 Getting page https://pypi.org/simple/mmcif-utils/ 2026-09-14T17:00:23,101 Found index url https://pypi.org/simple 2026-09-14T17:00:23,328 Fetched page https://pypi.org/simple/mmcif-utils/ as application/vnd.pypi.simple.v1+json 2026-09-14T17:00:23,334 Found link https://files.pythonhosted.org/packages/f3/80/dff5ede1197bfbb9d50741dc973e052961d3c4457c152b13c5349fb59855/mmcif.utils-0.10.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.10 2026-09-14T17:00:23,335 Found link https://files.pythonhosted.org/packages/c7/62/6f15b693673283c3b68c35435e0df4d1b9d98b73a5be5ebabf1f2c1b06f1/mmcif.utils-0.11.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.11 2026-09-14T17:00:23,336 Found link https://files.pythonhosted.org/packages/41/61/30428632dbce0f248e713ec65284af17cbe240cfb1cd3216cbd89bfcd92f/mmcif.utils-0.12.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.12 2026-09-14T17:00:23,336 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/a3/d6/13917debe76d604fe8b6227079b193eec57275f17a914351b4324f0b5bd9/mmcif.utils-0.13-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,337 Found link https://files.pythonhosted.org/packages/31/85/65b76a958d6738629ca31fc2f6271a71247ba8177c18ccbc68c14c34fe62/mmcif.utils-0.13.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.13 2026-09-14T17:00:23,338 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/d7/b4/15b4f49d3c00b9e2235ac12299d45ad3ac52d907eaf3a18f941b86b89a33/mmcif.utils-0.14-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,338 Found link https://files.pythonhosted.org/packages/58/ff/5cd18cad301818120644d408649b210117951378487a195afa570971d3c9/mmcif.utils-0.14.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.14 2026-09-14T17:00:23,339 Found link https://files.pythonhosted.org/packages/09/79/8e5e1a5d01b864d56266f6a327f3bc8822033d9077d3d4f276334b4d341a/mmcif.utils-0.20.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.20 2026-09-14T17:00:23,340 Found link https://files.pythonhosted.org/packages/3d/9c/104dce7f143aecf8eac24ef6cee95dee002f62388777f8ac9d69f08cabde/mmcif.utils-0.21.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.21 2026-09-14T17:00:23,340 Found link https://files.pythonhosted.org/packages/da/df/92ac16434b0cac9df602f0e15172e5b76f45a012d7bc40b3f69703faa459/mmcif.utils-0.22.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.22 2026-09-14T17:00:23,341 Found link https://files.pythonhosted.org/packages/19/67/1d6c70f129b2a04bfde6287bf3303463d80061f93ac967d64a2685a37401/mmcif.utils-0.24.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.24 2026-09-14T17:00:23,342 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/95/89/9d84de63b25907a20ada59f5a91988e3dc63fb083a15ff9c2791a6ae7e63/mmcif.utils-0.25-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,343 Found link https://files.pythonhosted.org/packages/25/cf/493c53bb71f23b7a668c4ec0c3af4d43596dca38305102cd5ec9f800aae7/mmcif.utils-0.25.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.25 2026-09-14T17:00:23,343 Found link https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.26 2026-09-14T17:00:23,344 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/86/28/57d4099a28fb5f3325d795c10c9230fd2757bca8e44c5cf0ba87f521d02c/mmcif.utils-0.27-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,345 Found link https://files.pythonhosted.org/packages/a7/97/019203744d032eff304ed31b60c1cf8b51d717adf8c66d1dc5712a9ab8b9/mmcif.utils-0.27.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.27 2026-09-14T17:00:23,345 Found link https://files.pythonhosted.org/packages/c1/3f/f76cf5e6fa8f2ffe6c87871b01032bd6ae7cebab8ed4f9ae5984b1c03ddf/mmcif.utils-0.28.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.28 2026-09-14T17:00:23,346 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/fb/6c/f61962b30c105bb8e501ee3325bb9f9082c6dc0dc4f067a600eb41d5962b/mmcif.utils-0.29-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,346 Found link https://files.pythonhosted.org/packages/b9/c0/476c5933410f9b89a47034d8044ab6d6d829f74e527c67d9bed2b1c1986f/mmcif_utils-0.29.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.29 2026-09-14T17:00:23,347 Found link https://files.pythonhosted.org/packages/02/08/b8d89ba746d849dee677a7b2a0418c50e5e9cbc49d2643520fa6f6eb0084/mmcif.utils-0.30.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.30 2026-09-14T17:00:23,348 Found link https://files.pythonhosted.org/packages/22/c9/e2126ee861c733c130a7064083ead247fad3cf679ab915b11249680397ab/mmcif_utils-0.30.1.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.30.1 2026-09-14T17:00:23,349 Skipping link: No binaries permitted for mmcif-utils: 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https://files.pythonhosted.org/packages/57/4f/7d536d592af98cb23b0c03604cb3ceee8db4a530dc3744ab75705c0b4a39/mmcif_utils-0.33-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-09-14T17:00:23,352 Found link https://files.pythonhosted.org/packages/0e/d4/9bff6cf5d5b879f599d4a995915542cbcdece9e2283ed9349299c756c4a4/mmcif_utils-0.33.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.33 2026-09-14T17:00:23,353 Fetching project page and analyzing links: https://www.piwheels.org/simple/mmcif-utils/ 2026-09-14T17:00:23,353 Getting page https://www.piwheels.org/simple/mmcif-utils/ 2026-09-14T17:00:23,355 Found index url https://www.piwheels.org/simple 2026-09-14T17:00:23,559 Fetched page https://www.piwheels.org/simple/mmcif-utils/ as text/html 2026-09-14T17:00:23,565 Skipping link: No binaries permitted for mmcif-utils: 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hashes to check 1 links for project 'mmcif-utils': discarding no candidates 2026-09-14T17:00:23,614 Collecting mmcif-utils==0.33 2026-09-14T17:00:23,616 Created temporary directory: /tmp/pip-unpack-0vedav0q 2026-09-14T17:00:23,767 Downloading mmcif_utils-0.33.tar.gz (92 kB) 2026-09-14T17:00:23,983 Added mmcif-utils==0.33 from https://files.pythonhosted.org/packages/0e/d4/9bff6cf5d5b879f599d4a995915542cbcdece9e2283ed9349299c756c4a4/mmcif_utils-0.33.tar.gz to build tracker '/tmp/pip-build-tracker-943uh9w_' 2026-09-14T17:00:23,984 Running setup.py (path:/tmp/pip-wheel-4kwo92h7/mmcif-utils_30978a8c13dd4208932394192518cb86/setup.py) egg_info for package mmcif-utils 2026-09-14T17:00:23,985 Created temporary directory: /tmp/pip-pip-egg-info-ng6n61_k 2026-09-14T17:00:23,986 Preparing metadata (setup.py): started 2026-09-14T17:00:23,987 Running command python setup.py egg_info 2026-09-14T17:00:24,554 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-09-14T17:00:24,554 !! 2026-09-14T17:00:24,555 ******************************************************************************** 2026-09-14T17:00:24,556 Usage of dash-separated 'description-file' will not be supported in future 2026-09-14T17:00:24,557 versions. Please use the underscore name 'description_file' instead. 2026-09-14T17:00:24,558 Available configuration options are listed in: 2026-09-14T17:00:24,559 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-09-14T17:00:24,560 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:24,561 calls to avoid build errors in the future. 2026-09-14T17:00:24,562 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-09-14T17:00:24,563 ******************************************************************************** 2026-09-14T17:00:24,564 !! 2026-09-14T17:00:24,564 opt = self._enforce_underscore(opt, section) 2026-09-14T17:00:24,588 Warning: 'classifiers' should be a list, got type 'tuple' 2026-09-14T17:00:24,590 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:318: UserWarning: Unknown distribution option: 'test_suite' 2026-09-14T17:00:24,591 warnings.warn(msg) 2026-09-14T17:00:24,592 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:318: UserWarning: Unknown distribution option: 'tests_require' 2026-09-14T17:00:24,592 warnings.warn(msg) 2026-09-14T17:00:24,922 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-09-14T17:00:24,923 !! 2026-09-14T17:00:24,924 ******************************************************************************** 2026-09-14T17:00:24,924 Usage of dash-separated 'description-file' will not be supported in future 2026-09-14T17:00:24,925 versions. Please use the underscore name 'description_file' instead. 2026-09-14T17:00:24,925 (Affected: mmcif.utils). 2026-09-14T17:00:24,926 Available configuration options are listed in: 2026-09-14T17:00:24,927 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-09-14T17:00:24,928 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:24,928 calls to avoid build errors in the future. 2026-09-14T17:00:24,929 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-09-14T17:00:24,930 ******************************************************************************** 2026-09-14T17:00:24,930 !! 2026-09-14T17:00:24,931 opt = self._enforce_underscore(opt, section) 2026-09-14T17:00:24,931 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-14T17:00:24,932 !! 2026-09-14T17:00:24,933 ******************************************************************************** 2026-09-14T17:00:24,934 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-14T17:00:24,935 License :: OSI Approved :: Apache Software License 2026-09-14T17:00:24,936 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-14T17:00:24,937 ******************************************************************************** 2026-09-14T17:00:24,938 !! 2026-09-14T17:00:24,939 self._finalize_license_expression() 2026-09-14T17:00:24,959 running egg_info 2026-09-14T17:00:24,988 creating /tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info 2026-09-14T17:00:24,989 writing /tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/PKG-INFO 2026-09-14T17:00:24,993 writing dependency_links to /tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/dependency_links.txt 2026-09-14T17:00:24,996 writing requirements to /tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/requires.txt 2026-09-14T17:00:24,997 writing top-level names to /tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/top_level.txt 2026-09-14T17:00:24,999 writing manifest file '/tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/SOURCES.txt' 2026-09-14T17:00:25,104 reading manifest file '/tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/SOURCES.txt' 2026-09-14T17:00:25,106 reading manifest template 'MANIFEST.in' 2026-09-14T17:00:25,107 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2026-09-14T17:00:25,108 adding license file 'LICENSE' 2026-09-14T17:00:25,112 writing manifest file '/tmp/pip-pip-egg-info-ng6n61_k/mmcif.utils.egg-info/SOURCES.txt' 2026-09-14T17:00:25,224 Preparing metadata (setup.py): finished with status 'done' 2026-09-14T17:00:25,229 Source in /tmp/pip-wheel-4kwo92h7/mmcif-utils_30978a8c13dd4208932394192518cb86 has version 0.33, which satisfies requirement mmcif-utils==0.33 from https://files.pythonhosted.org/packages/0e/d4/9bff6cf5d5b879f599d4a995915542cbcdece9e2283ed9349299c756c4a4/mmcif_utils-0.33.tar.gz 2026-09-14T17:00:25,230 Removed mmcif-utils==0.33 from https://files.pythonhosted.org/packages/0e/d4/9bff6cf5d5b879f599d4a995915542cbcdece9e2283ed9349299c756c4a4/mmcif_utils-0.33.tar.gz from build tracker '/tmp/pip-build-tracker-943uh9w_' 2026-09-14T17:00:25,234 Created temporary directory: /tmp/pip-unpack-d2ttqk6g 2026-09-14T17:00:25,235 Building wheels for collected packages: mmcif-utils 2026-09-14T17:00:25,239 Created temporary directory: /tmp/pip-wheel-ytudq1aq 2026-09-14T17:00:25,240 Building wheel for mmcif-utils (setup.py): started 2026-09-14T17:00:25,241 Destination directory: /tmp/pip-wheel-ytudq1aq 2026-09-14T17:00:25,241 Running command python setup.py bdist_wheel 2026-09-14T17:00:25,759 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-09-14T17:00:25,760 !! 2026-09-14T17:00:25,761 ******************************************************************************** 2026-09-14T17:00:25,761 Usage of dash-separated 'description-file' will not be supported in future 2026-09-14T17:00:25,762 versions. Please use the underscore name 'description_file' instead. 2026-09-14T17:00:25,763 Available configuration options are listed in: 2026-09-14T17:00:25,763 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-09-14T17:00:25,764 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:25,765 calls to avoid build errors in the future. 2026-09-14T17:00:25,766 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-09-14T17:00:25,766 ******************************************************************************** 2026-09-14T17:00:25,767 !! 2026-09-14T17:00:25,768 opt = self._enforce_underscore(opt, section) 2026-09-14T17:00:25,794 Warning: 'classifiers' should be a list, got type 'tuple' 2026-09-14T17:00:25,795 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:318: UserWarning: Unknown distribution option: 'test_suite' 2026-09-14T17:00:25,795 warnings.warn(msg) 2026-09-14T17:00:25,796 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:318: UserWarning: Unknown distribution option: 'tests_require' 2026-09-14T17:00:25,797 warnings.warn(msg) 2026-09-14T17:00:26,131 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-09-14T17:00:26,131 !! 2026-09-14T17:00:26,132 ******************************************************************************** 2026-09-14T17:00:26,133 Usage of dash-separated 'description-file' will not be supported in future 2026-09-14T17:00:26,134 versions. Please use the underscore name 'description_file' instead. 2026-09-14T17:00:26,134 (Affected: mmcif.utils). 2026-09-14T17:00:26,135 Available configuration options are listed in: 2026-09-14T17:00:26,136 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-09-14T17:00:26,137 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:26,138 calls to avoid build errors in the future. 2026-09-14T17:00:26,139 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-09-14T17:00:26,139 ******************************************************************************** 2026-09-14T17:00:26,140 !! 2026-09-14T17:00:26,141 opt = self._enforce_underscore(opt, section) 2026-09-14T17:00:26,142 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-14T17:00:26,142 !! 2026-09-14T17:00:26,144 ******************************************************************************** 2026-09-14T17:00:26,144 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-14T17:00:26,145 License :: OSI Approved :: Apache Software License 2026-09-14T17:00:26,146 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-14T17:00:26,147 ******************************************************************************** 2026-09-14T17:00:26,148 !! 2026-09-14T17:00:26,148 self._finalize_license_expression() 2026-09-14T17:00:26,149 running bdist_wheel 2026-09-14T17:00:26,221 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:119: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2026-09-14T17:00:26,221 !! 2026-09-14T17:00:26,222 ******************************************************************************** 2026-09-14T17:00:26,223 With Python 2.7 end-of-life, support for building universal wheels 2026-09-14T17:00:26,223 (i.e., wheels that support both Python 2 and Python 3) 2026-09-14T17:00:26,224 is being obviated. 2026-09-14T17:00:26,224 Please discontinue using this option, or if you still need it, 2026-09-14T17:00:26,225 file an issue with pypa/setuptools describing your use case. 2026-09-14T17:00:26,226 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:26,226 calls to avoid build errors in the future. 2026-09-14T17:00:26,227 ******************************************************************************** 2026-09-14T17:00:26,228 !! 2026-09-14T17:00:26,228 self.finalize_options() 2026-09-14T17:00:26,289 running build 2026-09-14T17:00:26,290 running build_py 2026-09-14T17:00:26,330 creating build/lib/mmcif_utils 2026-09-14T17:00:26,332 copying mmcif_utils/__init__.py -> build/lib/mmcif_utils 2026-09-14T17:00:26,335 creating build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,336 copying mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,338 copying mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,340 copying mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,343 copying mmcif_utils/chemcomp/__init__.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,344 copying mmcif_utils/chemcomp/PdbxChemComp.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,347 copying mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/lib/mmcif_utils/chemcomp 2026-09-14T17:00:26,350 creating build/lib/mmcif_utils/trans 2026-09-14T17:00:26,351 copying mmcif_utils/trans/__init__.py -> build/lib/mmcif_utils/trans 2026-09-14T17:00:26,353 copying mmcif_utils/trans/FilterCif.py -> build/lib/mmcif_utils/trans 2026-09-14T17:00:26,355 copying mmcif_utils/trans/InstanceMapper.py -> build/lib/mmcif_utils/trans 2026-09-14T17:00:26,357 copying mmcif_utils/trans/DictionaryMapper.py -> build/lib/mmcif_utils/trans 2026-09-14T17:00:26,360 copying mmcif_utils/trans/DictionaryMapperIo.py -> build/lib/mmcif_utils/trans 2026-09-14T17:00:26,362 creating build/lib/mmcif_utils/inventory 2026-09-14T17:00:26,364 copying mmcif_utils/inventory/InventoryIo.py -> build/lib/mmcif_utils/inventory 2026-09-14T17:00:26,366 copying mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/lib/mmcif_utils/inventory 2026-09-14T17:00:26,369 copying mmcif_utils/inventory/__init__.py -> build/lib/mmcif_utils/inventory 2026-09-14T17:00:26,371 creating build/lib/mmcif_utils/style 2026-09-14T17:00:26,372 copying mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,374 copying mmcif_utils/style/ChemCompCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,377 copying mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,379 copying mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,381 copying mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,384 copying mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,386 copying mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,389 copying mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,391 copying mmcif_utils/style/PdbxCategoryStyleBase.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,393 copying mmcif_utils/style/make-style-from-item-list.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,395 copying mmcif_utils/style/__init__.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,396 copying mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,398 copying mmcif_utils/style/PrdCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,401 copying mmcif_utils/style/PdbxStyleIoUtil.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,403 copying mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,406 copying mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,408 copying mmcif_utils/style/PdbxReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-09-14T17:00:26,411 creating build/lib/mmcif_utils/pdbx 2026-09-14T17:00:26,412 copying mmcif_utils/pdbx/PdbxIo.py -> build/lib/mmcif_utils/pdbx 2026-09-14T17:00:26,415 copying mmcif_utils/pdbx/__init__.py -> build/lib/mmcif_utils/pdbx 2026-09-14T17:00:26,417 creating build/lib/mmcif_utils/persist 2026-09-14T17:00:26,418 copying mmcif_utils/persist/PdbxDictionaryInfo.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,421 copying mmcif_utils/persist/PdbxPyIoAdapter.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,424 copying mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,426 copying mmcif_utils/persist/__init__.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,428 copying mmcif_utils/persist/LockFile.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,430 copying mmcif_utils/persist/PdbxPersist.py -> build/lib/mmcif_utils/persist 2026-09-14T17:00:26,433 creating build/lib/mmcif_utils/message 2026-09-14T17:00:26,434 copying mmcif_utils/message/PdbxMessage.py -> build/lib/mmcif_utils/message 2026-09-14T17:00:26,436 copying mmcif_utils/message/__init__.py -> build/lib/mmcif_utils/message 2026-09-14T17:00:26,438 copying mmcif_utils/message/PdbxMessageIo.py -> build/lib/mmcif_utils/message 2026-09-14T17:00:26,440 creating build/lib/mmcif_utils/bird 2026-09-14T17:00:26,441 copying mmcif_utils/bird/PdbxPrd.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,444 copying mmcif_utils/bird/PdbxPrdCcIo.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,446 copying mmcif_utils/bird/PdbxPrdIo.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,449 copying mmcif_utils/bird/PdbxFamilyIo.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,451 copying mmcif_utils/bird/PdbxBirdIndex.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,453 copying mmcif_utils/bird/__init__.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,455 copying mmcif_utils/bird/PdbxPrdUtils.py -> build/lib/mmcif_utils/bird 2026-09-14T17:00:26,458 creating build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,459 copying mmcif_utils/pdb/PdbxVersion.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,461 copying mmcif_utils/pdb/__init__.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,463 copying mmcif_utils/pdb/PdbxAtomSite.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,465 copying mmcif_utils/pdb/PdbxAnnFeature.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,467 copying mmcif_utils/pdb/PdbxConnect.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,470 copying mmcif_utils/pdb/PdbxConnectTests.py -> build/lib/mmcif_utils/pdb 2026-09-14T17:00:26,473 creating build/lib/mmcif_utils/bird/cl 2026-09-14T17:00:26,474 copying mmcif_utils/bird/cl/__init__.py -> build/lib/mmcif_utils/bird/cl 2026-09-14T17:00:26,475 copying mmcif_utils/bird/cl/PdbxPrdExec.py -> build/lib/mmcif_utils/bird/cl 2026-09-14T17:00:26,525 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-09-14T17:00:26,525 !! 2026-09-14T17:00:26,526 ******************************************************************************** 2026-09-14T17:00:26,527 Please avoid running ``setup.py`` directly. 2026-09-14T17:00:26,527 Instead, use pypa/build, pypa/installer or other 2026-09-14T17:00:26,527 standards-based tools. 2026-09-14T17:00:26,528 This deprecation is overdue, please update your project and remove deprecated 2026-09-14T17:00:26,529 calls to avoid build errors in the future. 2026-09-14T17:00:26,530 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-09-14T17:00:26,530 ******************************************************************************** 2026-09-14T17:00:26,531 !! 2026-09-14T17:00:26,531 self.initialize_options() 2026-09-14T17:00:26,553 installing to build/bdist.linux-armv7l/wheel 2026-09-14T17:00:26,554 running install 2026-09-14T17:00:26,576 running install_lib 2026-09-14T17:00:26,603 creating build/bdist.linux-armv7l/wheel 2026-09-14T17:00:26,605 creating build/bdist.linux-armv7l/wheel/mmcif_utils 2026-09-14T17:00:26,606 creating build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2026-09-14T17:00:26,608 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,610 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,612 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,614 copying build/lib/mmcif_utils/chemcomp/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,616 copying build/lib/mmcif_utils/chemcomp/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,618 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-09-14T17:00:26,621 creating build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2026-09-14T17:00:26,622 copying build/lib/mmcif_utils/trans/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-09-14T17:00:26,623 copying build/lib/mmcif_utils/trans/FilterCif.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-09-14T17:00:26,626 copying build/lib/mmcif_utils/trans/InstanceMapper.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-09-14T17:00:26,628 copying build/lib/mmcif_utils/trans/DictionaryMapper.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-09-14T17:00:26,630 copying build/lib/mmcif_utils/trans/DictionaryMapperIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-09-14T17:00:26,633 creating build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2026-09-14T17:00:26,634 copying build/lib/mmcif_utils/inventory/InventoryIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-09-14T17:00:26,636 copying build/lib/mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-09-14T17:00:26,639 copying build/lib/mmcif_utils/inventory/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-09-14T17:00:26,641 creating build/bdist.linux-armv7l/wheel/mmcif_utils/style 2026-09-14T17:00:26,642 copying build/lib/mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,644 copying build/lib/mmcif_utils/style/ChemCompCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,647 copying build/lib/mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,649 copying build/lib/mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,651 copying build/lib/mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,653 copying build/lib/mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,655 copying build/lib/mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,658 copying build/lib/mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,660 copying build/lib/mmcif_utils/style/PdbxCategoryStyleBase.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,662 copying build/lib/mmcif_utils/style/make-style-from-item-list.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,664 copying build/lib/mmcif_utils/style/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,665 copying build/lib/mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,667 copying build/lib/mmcif_utils/style/PrdCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,669 copying build/lib/mmcif_utils/style/PdbxStyleIoUtil.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,672 copying build/lib/mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,674 copying build/lib/mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,676 copying build/lib/mmcif_utils/style/PdbxReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-09-14T17:00:26,680 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdbx 2026-09-14T17:00:26,681 copying build/lib/mmcif_utils/pdbx/PdbxIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdbx 2026-09-14T17:00:26,684 copying build/lib/mmcif_utils/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdbx 2026-09-14T17:00:26,686 creating build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2026-09-14T17:00:26,687 copying build/lib/mmcif_utils/persist/PdbxDictionaryInfo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,690 copying build/lib/mmcif_utils/persist/PdbxPyIoAdapter.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,693 copying build/lib/mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,695 copying build/lib/mmcif_utils/persist/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,696 copying build/lib/mmcif_utils/persist/LockFile.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,698 copying build/lib/mmcif_utils/persist/PdbxPersist.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-09-14T17:00:26,701 copying build/lib/mmcif_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils 2026-09-14T17:00:26,703 creating build/bdist.linux-armv7l/wheel/mmcif_utils/message 2026-09-14T17:00:26,705 copying build/lib/mmcif_utils/message/PdbxMessage.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-09-14T17:00:26,707 copying build/lib/mmcif_utils/message/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-09-14T17:00:26,708 copying build/lib/mmcif_utils/message/PdbxMessageIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-09-14T17:00:26,711 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2026-09-14T17:00:26,712 copying build/lib/mmcif_utils/bird/PdbxPrd.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,715 copying build/lib/mmcif_utils/bird/PdbxPrdCcIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,717 copying build/lib/mmcif_utils/bird/PdbxPrdIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,719 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird/cl 2026-09-14T17:00:26,720 copying build/lib/mmcif_utils/bird/cl/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird/cl 2026-09-14T17:00:26,722 copying build/lib/mmcif_utils/bird/cl/PdbxPrdExec.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird/cl 2026-09-14T17:00:26,724 copying build/lib/mmcif_utils/bird/PdbxFamilyIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,730 copying build/lib/mmcif_utils/bird/PdbxBirdIndex.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,732 copying build/lib/mmcif_utils/bird/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,733 copying build/lib/mmcif_utils/bird/PdbxPrdUtils.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-09-14T17:00:26,736 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2026-09-14T17:00:26,737 copying build/lib/mmcif_utils/pdb/PdbxVersion.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,740 copying build/lib/mmcif_utils/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,741 copying build/lib/mmcif_utils/pdb/PdbxAtomSite.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,744 copying build/lib/mmcif_utils/pdb/PdbxAnnFeature.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,746 copying build/lib/mmcif_utils/pdb/PdbxConnect.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,749 copying build/lib/mmcif_utils/pdb/PdbxConnectTests.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-09-14T17:00:26,751 running install_egg_info 2026-09-14T17:00:26,785 running egg_info 2026-09-14T17:00:26,813 writing mmcif.utils.egg-info/PKG-INFO 2026-09-14T17:00:26,816 writing dependency_links to mmcif.utils.egg-info/dependency_links.txt 2026-09-14T17:00:26,818 writing requirements to mmcif.utils.egg-info/requires.txt 2026-09-14T17:00:26,820 writing top-level names to mmcif.utils.egg-info/top_level.txt 2026-09-14T17:00:26,869 reading manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2026-09-14T17:00:26,874 reading manifest template 'MANIFEST.in' 2026-09-14T17:00:26,875 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2026-09-14T17:00:26,876 adding license file 'LICENSE' 2026-09-14T17:00:26,881 writing manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2026-09-14T17:00:26,882 Copying mmcif.utils.egg-info to build/bdist.linux-armv7l/wheel/./mmcif.utils-0.33-py3.11.egg-info 2026-09-14T17:00:26,894 running install_scripts 2026-09-14T17:00:26,906 creating build/bdist.linux-armv7l/wheel/mmcif_utils-0.33.dist-info/WHEEL 2026-09-14T17:00:26,908 creating '/tmp/pip-wheel-ytudq1aq/mmcif_utils-0.33-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-09-14T17:00:26,911 adding 'mmcif_utils/__init__.py' 2026-09-14T17:00:26,913 adding 'mmcif_utils/bird/PdbxBirdIndex.py' 2026-09-14T17:00:26,915 adding 'mmcif_utils/bird/PdbxFamilyIo.py' 2026-09-14T17:00:26,917 adding 'mmcif_utils/bird/PdbxPrd.py' 2026-09-14T17:00:26,918 adding 'mmcif_utils/bird/PdbxPrdCcIo.py' 2026-09-14T17:00:26,920 adding 'mmcif_utils/bird/PdbxPrdIo.py' 2026-09-14T17:00:26,923 adding 'mmcif_utils/bird/PdbxPrdUtils.py' 2026-09-14T17:00:26,924 adding 'mmcif_utils/bird/__init__.py' 2026-09-14T17:00:26,927 adding 'mmcif_utils/bird/cl/PdbxPrdExec.py' 2026-09-14T17:00:26,928 adding 'mmcif_utils/bird/cl/__init__.py' 2026-09-14T17:00:26,930 adding 'mmcif_utils/chemcomp/PdbxChemComp.py' 2026-09-14T17:00:26,932 adding 'mmcif_utils/chemcomp/PdbxChemCompIo.py' 2026-09-14T17:00:26,933 adding 'mmcif_utils/chemcomp/PdbxChemCompModel.py' 2026-09-14T17:00:26,935 adding 'mmcif_utils/chemcomp/PdbxChemCompModelIo.py' 2026-09-14T17:00:26,937 adding 'mmcif_utils/chemcomp/PdbxChemCompUtils.py' 2026-09-14T17:00:26,939 adding 'mmcif_utils/chemcomp/__init__.py' 2026-09-14T17:00:26,940 adding 'mmcif_utils/inventory/InventoryIo.py' 2026-09-14T17:00:26,942 adding 'mmcif_utils/inventory/InventoryIoBatchRunner.py' 2026-09-14T17:00:26,943 adding 'mmcif_utils/inventory/__init__.py' 2026-09-14T17:00:26,945 adding 'mmcif_utils/message/PdbxMessage.py' 2026-09-14T17:00:26,947 adding 'mmcif_utils/message/PdbxMessageIo.py' 2026-09-14T17:00:26,948 adding 'mmcif_utils/message/__init__.py' 2026-09-14T17:00:26,950 adding 'mmcif_utils/pdb/PdbxAnnFeature.py' 2026-09-14T17:00:26,952 adding 'mmcif_utils/pdb/PdbxAtomSite.py' 2026-09-14T17:00:26,954 adding 'mmcif_utils/pdb/PdbxConnect.py' 2026-09-14T17:00:26,956 adding 'mmcif_utils/pdb/PdbxConnectTests.py' 2026-09-14T17:00:26,958 adding 'mmcif_utils/pdb/PdbxVersion.py' 2026-09-14T17:00:26,959 adding 'mmcif_utils/pdb/__init__.py' 2026-09-14T17:00:26,962 adding 'mmcif_utils/pdbx/PdbxIo.py' 2026-09-14T17:00:26,963 adding 'mmcif_utils/pdbx/__init__.py' 2026-09-14T17:00:26,965 adding 'mmcif_utils/persist/LockFile.py' 2026-09-14T17:00:26,967 adding 'mmcif_utils/persist/PdbxCoreIoAdapter.py' 2026-09-14T17:00:26,971 adding 'mmcif_utils/persist/PdbxDictionaryInfo.py' 2026-09-14T17:00:26,974 adding 'mmcif_utils/persist/PdbxPersist.py' 2026-09-14T17:00:26,975 adding 'mmcif_utils/persist/PdbxPyIoAdapter.py' 2026-09-14T17:00:26,976 adding 'mmcif_utils/persist/__init__.py' 2026-09-14T17:00:26,979 adding 'mmcif_utils/style/ChemCompCategoryStyle.py' 2026-09-14T17:00:26,980 adding 'mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py' 2026-09-14T17:00:26,982 adding 'mmcif_utils/style/ChemCompModelCategoryStyle.py' 2026-09-14T17:00:26,983 adding 'mmcif_utils/style/PdbxCategoryStyleBase.py' 2026-09-14T17:00:26,986 adding 'mmcif_utils/style/PdbxEmExtensionCategoryStyle.py' 2026-09-14T17:00:26,988 adding 'mmcif_utils/style/PdbxEntryInfoCategoryStyle.py' 2026-09-14T17:00:26,990 adding 'mmcif_utils/style/PdbxGeometryReportCategoryStyle.py' 2026-09-14T17:00:26,991 adding 'mmcif_utils/style/PdbxItemMappingCategoryStyle.py' 2026-09-14T17:00:26,992 adding 'mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py' 2026-09-14T17:00:26,994 adding 'mmcif_utils/style/PdbxMessageCategoryStyle.py' 2026-09-14T17:00:26,999 adding 'mmcif_utils/style/PdbxReportCategoryStyle.py' 2026-09-14T17:00:27,000 adding 'mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py' 2026-09-14T17:00:27,004 adding 'mmcif_utils/style/PdbxStyleIoUtil.py' 2026-09-14T17:00:27,005 adding 'mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py' 2026-09-14T17:00:27,007 adding 'mmcif_utils/style/PrdCategoryStyle.py' 2026-09-14T17:00:27,008 adding 'mmcif_utils/style/__init__.py' 2026-09-14T17:00:27,010 adding 'mmcif_utils/style/make-style-from-item-list.py' 2026-09-14T17:00:27,012 adding 'mmcif_utils/trans/DictionaryMapper.py' 2026-09-14T17:00:27,013 adding 'mmcif_utils/trans/DictionaryMapperIo.py' 2026-09-14T17:00:27,015 adding 'mmcif_utils/trans/FilterCif.py' 2026-09-14T17:00:27,017 adding 'mmcif_utils/trans/InstanceMapper.py' 2026-09-14T17:00:27,019 adding 'mmcif_utils/trans/__init__.py' 2026-09-14T17:00:27,021 adding 'mmcif_utils-0.33.dist-info/licenses/LICENSE' 2026-09-14T17:00:27,022 adding 'mmcif_utils-0.33.dist-info/METADATA' 2026-09-14T17:00:27,023 adding 'mmcif_utils-0.33.dist-info/WHEEL' 2026-09-14T17:00:27,024 adding 'mmcif_utils-0.33.dist-info/top_level.txt' 2026-09-14T17:00:27,025 adding 'mmcif_utils-0.33.dist-info/zip-safe' 2026-09-14T17:00:27,026 adding 'mmcif_utils-0.33.dist-info/RECORD' 2026-09-14T17:00:27,029 removing build/bdist.linux-armv7l/wheel 2026-09-14T17:00:27,161 Building wheel for mmcif-utils (setup.py): finished with status 'done' 2026-09-14T17:00:27,165 Created wheel for mmcif-utils: filename=mmcif_utils-0.33-py2.py3-none-any.whl size=122395 sha256=17223f7f0fe8c2d26713cf5b33c0fe0d32ab9c83d727fa34f7695c387becd5d0 2026-09-14T17:00:27,166 Stored in directory: /tmp/pip-ephem-wheel-cache-k2oe3od1/wheels/67/2a/d2/c50a57bdbb693067e3121c057faecef712b10b23969f1c4e84 2026-09-14T17:00:27,178 Successfully built mmcif-utils 2026-09-14T17:00:27,185 Removed build tracker: '/tmp/pip-build-tracker-943uh9w_'