2026-09-24T01:26:37,518 Created temporary directory: /tmp/pip-ephem-wheel-cache-jj5by_y7 2026-09-24T01:26:37,520 Created temporary directory: /tmp/pip-build-tracker-kov7j9vt 2026-09-24T01:26:37,520 Initialized build tracking at /tmp/pip-build-tracker-kov7j9vt 2026-09-24T01:26:37,521 Created build tracker: /tmp/pip-build-tracker-kov7j9vt 2026-09-24T01:26:37,521 Entered build tracker: /tmp/pip-build-tracker-kov7j9vt 2026-09-24T01:26:37,522 Created temporary directory: /tmp/pip-wheel-x9xu10vw 2026-09-24T01:26:37,525 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-09-24T01:26:37,527 Created temporary directory: /tmp/pip-ephem-wheel-cache-v1mrk1ry 2026-09-24T01:26:37,549 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-09-24T01:26:37,552 2 location(s) to search for versions of isovar: 2026-09-24T01:26:37,552 * https://pypi.org/simple/isovar/ 2026-09-24T01:26:37,552 * https://www.piwheels.org/simple/isovar/ 2026-09-24T01:26:37,553 Fetching project page and analyzing links: https://pypi.org/simple/isovar/ 2026-09-24T01:26:37,554 Getting page https://pypi.org/simple/isovar/ 2026-09-24T01:26:37,555 Found index url https://pypi.org/simple 2026-09-24T01:26:37,816 Fetched page https://pypi.org/simple/isovar/ as application/vnd.pypi.simple.v1+json 2026-09-24T01:26:37,855 Found link https://files.pythonhosted.org/packages/b6/80/350ac9b97f7c872d7f2422a11bdb228a0286661fe2983884724735bff630/isovar-0.0.5.tar.gz (from https://pypi.org/simple/isovar/), 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https://files.pythonhosted.org/packages/45/d5/c1fdb8d640d0d7c14d61f3bfdd6ee0181657539c24128ff3039ab133a56d/isovar-1.24.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.24.0 2026-09-24T01:26:38,035 Fetching project page and analyzing links: https://www.piwheels.org/simple/isovar/ 2026-09-24T01:26:38,036 Getting page https://www.piwheels.org/simple/isovar/ 2026-09-24T01:26:38,037 Found index url https://www.piwheels.org/simple 2026-09-24T01:26:38,333 Fetched page https://www.piwheels.org/simple/isovar/ as text/html 2026-09-24T01:26:38,368 Skipping link: No binaries permitted for isovar: https://www.piwheels.org/simple/isovar/isovar-1.22.1-py3-none-any.whl#sha256=cce1740f3bae48e8537eca4d0fe9a8f5e3c22b5cc2d5d4bc96bb47207278b426 (from https://www.piwheels.org/simple/isovar/) (requires-python:>=3.9) 2026-09-24T01:26:38,369 Skipping link: No binaries permitted for isovar: 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2026-09-24T01:26:38,441 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.3-py3-none-any.whl#sha256=f12eae279834045a239b4762d1849c44173b29617a7858de5ead71a13d1f39cc (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,441 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.2-py3-none-any.whl#sha256=9b8ea377bb2e317603890ef935ddaca811af4337780d82fc56c33517a277182b (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,442 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.1-py3-none-any.whl#sha256=a027a8f2bb06d45c573a79bfec0ed8dce083f9120aec3e91482dc74401039e46 (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,442 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.0-py3-none-any.whl#sha256=ab7b0e6349d9a2c4802489d7cc7a867b23e3c2972f66283839629ac8f858cbce (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,443 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.5-py3-none-any.whl#sha256=ba9438ba3b8c2a1e59345d0c9fbfb207ded65feaf93b8d4dbf0972c7de89035c (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,444 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.3-py3-none-any.whl#sha256=c266801b0b080abcaf155870dfcd593ca904b27565767a27067326c819f0b15c (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,444 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.0-py3-none-any.whl#sha256=272454342ccc3da1af19007ad496e6d33165a4482470cef97f1e1bd4a898aee8 (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,445 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.6-py3-none-any.whl#sha256=04d869c163e51c11ed2d2bb125bffaf7e0c89cb17d906bcbc52914d1fa888e72 (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,445 Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.5-py3-none-any.whl#sha256=57d3b95575aae8439f0aaa54ce12c1cb00b1bcb2e4fec582550cb0484903bcbc (from https://www.piwheels.org/simple/isovar/) 2026-09-24T01:26:38,446 Skipping link: not a file: https://www.piwheels.org/simple/isovar/ 2026-09-24T01:26:38,446 Skipping link: not a file: https://pypi.org/simple/isovar/ 2026-09-24T01:26:38,481 Given no hashes to check 1 links for project 'isovar': discarding no candidates 2026-09-24T01:26:38,501 Collecting isovar==1.22.2 2026-09-24T01:26:38,504 Created temporary directory: /tmp/pip-unpack-xzy0bwcm 2026-09-24T01:26:38,664 Downloading isovar-1.22.2.tar.gz (8.3 MB) 2026-09-24T01:26:40,642 Added isovar==1.22.2 from https://files.pythonhosted.org/packages/f0/a1/db020a19bee0e555c9629813a1b18dc60a953542cf37d2c2db77dbb9eebe/isovar-1.22.2.tar.gz to build tracker '/tmp/pip-build-tracker-kov7j9vt' 2026-09-24T01:26:40,650 Created temporary directory: /tmp/pip-build-env-ow5e0xqf 2026-09-24T01:26:40,659 Installing build dependencies: started 2026-09-24T01:26:40,660 Running command pip subprocess to install build dependencies 2026-09-24T01:26:41,899 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-09-24T01:26:42,388 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-09-24T01:26:42,413 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-09-24T01:26:44,221 Collecting setuptools>=64 2026-09-24T01:26:44,222 Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata 2026-09-24T01:26:44,236 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-09-24T01:26:44,489 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-09-24T01:26:44,623 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-09-24T01:26:47,347 Installing collected packages: setuptools 2026-09-24T01:26:49,565 Successfully installed setuptools-84.0.0 2026-09-24T01:26:49,834 Installing build dependencies: finished with status 'done' 2026-09-24T01:26:49,840 Getting requirements to build wheel: started 2026-09-24T01:26:49,841 Running command Getting requirements to build wheel 2026-09-24T01:26:50,575 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:50,575 !! 2026-09-24T01:26:50,576 ******************************************************************************** 2026-09-24T01:26:50,577 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:50,577 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:50,578 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:50,579 ******************************************************************************** 2026-09-24T01:26:50,580 !! 2026-09-24T01:26:50,580 dist._finalize_license_expression() 2026-09-24T01:26:50,583 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:50,583 !! 2026-09-24T01:26:50,584 ******************************************************************************** 2026-09-24T01:26:50,585 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:50,586 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:50,586 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:50,587 ******************************************************************************** 2026-09-24T01:26:50,588 !! 2026-09-24T01:26:50,589 self._finalize_license_expression() 2026-09-24T01:26:50,593 running egg_info 2026-09-24T01:26:50,599 writing isovar.egg-info/PKG-INFO 2026-09-24T01:26:50,604 writing dependency_links to isovar.egg-info/dependency_links.txt 2026-09-24T01:26:50,606 writing entry points to isovar.egg-info/entry_points.txt 2026-09-24T01:26:50,608 writing requirements to isovar.egg-info/requires.txt 2026-09-24T01:26:50,610 writing top-level names to isovar.egg-info/top_level.txt 2026-09-24T01:26:50,638 reading manifest file 'isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:50,652 reading manifest template 'MANIFEST.in' 2026-09-24T01:26:50,711 adding license file 'LICENSE' 2026-09-24T01:26:50,724 writing manifest file 'isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:50,822 Getting requirements to build wheel: finished with status 'done' 2026-09-24T01:26:50,826 Created temporary directory: /tmp/pip-modern-metadata-a3syhj6z 2026-09-24T01:26:50,828 Preparing metadata (pyproject.toml): started 2026-09-24T01:26:50,829 Running command Preparing metadata (pyproject.toml) 2026-09-24T01:26:51,510 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:51,510 !! 2026-09-24T01:26:51,511 ******************************************************************************** 2026-09-24T01:26:51,512 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:51,513 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:51,514 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:51,514 ******************************************************************************** 2026-09-24T01:26:51,516 !! 2026-09-24T01:26:51,516 dist._finalize_license_expression() 2026-09-24T01:26:51,517 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:51,518 !! 2026-09-24T01:26:51,519 ******************************************************************************** 2026-09-24T01:26:51,519 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:51,521 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:51,522 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:51,522 ******************************************************************************** 2026-09-24T01:26:51,523 !! 2026-09-24T01:26:51,524 self._finalize_license_expression() 2026-09-24T01:26:51,524 running dist_info 2026-09-24T01:26:51,533 creating /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info 2026-09-24T01:26:51,534 writing /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/PKG-INFO 2026-09-24T01:26:51,539 writing dependency_links to /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/dependency_links.txt 2026-09-24T01:26:51,541 writing entry points to /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/entry_points.txt 2026-09-24T01:26:51,543 writing requirements to /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/requires.txt 2026-09-24T01:26:51,544 writing top-level names to /tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/top_level.txt 2026-09-24T01:26:51,546 writing manifest file '/tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:51,573 reading manifest file '/tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:51,575 reading manifest template 'MANIFEST.in' 2026-09-24T01:26:51,635 adding license file 'LICENSE' 2026-09-24T01:26:51,645 writing manifest file '/tmp/pip-modern-metadata-a3syhj6z/isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:51,646 creating '/tmp/pip-modern-metadata-a3syhj6z/isovar-1.22.2.dist-info' 2026-09-24T01:26:51,774 Preparing metadata (pyproject.toml): finished with status 'done' 2026-09-24T01:26:51,779 Source in /tmp/pip-wheel-x9xu10vw/isovar_a304abe72b8b4b5e82765167b2b61402 has version 1.22.2, which satisfies requirement isovar==1.22.2 from https://files.pythonhosted.org/packages/f0/a1/db020a19bee0e555c9629813a1b18dc60a953542cf37d2c2db77dbb9eebe/isovar-1.22.2.tar.gz 2026-09-24T01:26:51,780 Removed isovar==1.22.2 from https://files.pythonhosted.org/packages/f0/a1/db020a19bee0e555c9629813a1b18dc60a953542cf37d2c2db77dbb9eebe/isovar-1.22.2.tar.gz from build tracker '/tmp/pip-build-tracker-kov7j9vt' 2026-09-24T01:26:51,788 Created temporary directory: /tmp/pip-unpack-amznfc3s 2026-09-24T01:26:51,788 Building wheels for collected packages: isovar 2026-09-24T01:26:51,792 Created temporary directory: /tmp/pip-wheel-4cyzpj49 2026-09-24T01:26:51,793 Destination directory: /tmp/pip-wheel-4cyzpj49 2026-09-24T01:26:51,795 Building wheel for isovar (pyproject.toml): started 2026-09-24T01:26:51,796 Running command Building wheel for isovar (pyproject.toml) 2026-09-24T01:26:52,456 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:52,456 !! 2026-09-24T01:26:52,457 ******************************************************************************** 2026-09-24T01:26:52,457 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:52,458 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:52,459 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:52,460 ******************************************************************************** 2026-09-24T01:26:52,461 !! 2026-09-24T01:26:52,462 dist._finalize_license_expression() 2026-09-24T01:26:52,463 /tmp/pip-build-env-ow5e0xqf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-09-24T01:26:52,464 !! 2026-09-24T01:26:52,465 ******************************************************************************** 2026-09-24T01:26:52,466 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-09-24T01:26:52,467 License :: OSI Approved :: Apache Software License 2026-09-24T01:26:52,468 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-09-24T01:26:52,468 ******************************************************************************** 2026-09-24T01:26:52,469 !! 2026-09-24T01:26:52,469 self._finalize_license_expression() 2026-09-24T01:26:52,470 running bdist_wheel 2026-09-24T01:26:52,485 running build 2026-09-24T01:26:52,486 running build_py 2026-09-24T01:26:52,494 creating build/lib/isovar 2026-09-24T01:26:52,496 copying isovar/string_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,498 copying isovar/cell_umi.py -> build/lib/isovar 2026-09-24T01:26:52,500 copying isovar/variant_sequence.py -> build/lib/isovar 2026-09-24T01:26:52,503 copying isovar/variant_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,505 copying isovar/sv_rna.py -> build/lib/isovar 2026-09-24T01:26:52,509 copying isovar/variant_sequence_creator.py -> build/lib/isovar 2026-09-24T01:26:52,511 copying isovar/logging.py -> build/lib/isovar 2026-09-24T01:26:52,513 copying isovar/variant_orf.py -> build/lib/isovar 2026-09-24T01:26:52,515 copying isovar/phasing.py -> build/lib/isovar 2026-09-24T01:26:52,518 copying isovar/variant_sequence_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,520 copying isovar/chimeric_alignment.py -> build/lib/isovar 2026-09-24T01:26:52,523 copying isovar/read_collector.py -> build/lib/isovar 2026-09-24T01:26:52,525 copying isovar/transcript_assembly_edit.py -> build/lib/isovar 2026-09-24T01:26:52,527 copying isovar/protein_comparison.py -> build/lib/isovar 2026-09-24T01:26:52,529 copying isovar/read_lineage.py -> build/lib/isovar 2026-09-24T01:26:52,532 copying isovar/variant_orf_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,534 copying isovar/transcript_edit_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,536 copying isovar/read_identity.py -> build/lib/isovar 2026-09-24T01:26:52,538 copying isovar/read_evidence.py -> build/lib/isovar 2026-09-24T01:26:52,540 copying isovar/assembly.py -> build/lib/isovar 2026-09-24T01:26:52,543 copying isovar/isovar_result.py -> build/lib/isovar 2026-09-24T01:26:52,545 copying isovar/dataframe_builder.py -> build/lib/isovar 2026-09-24T01:26:52,548 copying isovar/main.py -> build/lib/isovar 2026-09-24T01:26:52,550 copying isovar/read_end_inference.py -> build/lib/isovar 2026-09-24T01:26:52,552 copying isovar/transcript_compatibility.py -> build/lib/isovar 2026-09-24T01:26:52,554 copying isovar/fusion.py -> build/lib/isovar 2026-09-24T01:26:52,557 copying isovar/protein_sequence.py -> build/lib/isovar 2026-09-24T01:26:52,560 copying isovar/isovar_result_provider.py -> build/lib/isovar 2026-09-24T01:26:52,562 copying isovar/translation_key.py -> build/lib/isovar 2026-09-24T01:26:52,563 copying isovar/protein_sequence_creator.py -> build/lib/isovar 2026-09-24T01:26:52,566 copying isovar/translation_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,568 copying isovar/default_parameters.py -> build/lib/isovar 2026-09-24T01:26:52,570 copying isovar/sv_rna_comparison.py -> build/lib/isovar 2026-09-24T01:26:52,572 copying isovar/dna.py -> build/lib/isovar 2026-09-24T01:26:52,574 copying isovar/sid_data.py -> build/lib/isovar 2026-09-24T01:26:52,576 copying isovar/allele_read_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,579 copying isovar/dataframe_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,582 copying isovar/osteosarc_data.py -> build/lib/isovar 2026-09-24T01:26:52,584 copying isovar/reference_context.py -> build/lib/isovar 2026-09-24T01:26:52,586 copying isovar/sv_rna_orf_export.py -> build/lib/isovar 2026-09-24T01:26:52,589 copying isovar/mutant_transcript_source.py -> build/lib/isovar 2026-09-24T01:26:52,590 copying isovar/read_metadata.py -> build/lib/isovar 2026-09-24T01:26:52,592 copying isovar/phase_group.py -> build/lib/isovar 2026-09-24T01:26:52,594 copying isovar/translation.py -> build/lib/isovar 2026-09-24T01:26:52,596 copying isovar/reference_context_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,598 copying isovar/sv_rna_orfs.py -> build/lib/isovar 2026-09-24T01:26:52,600 copying isovar/__init__.py -> build/lib/isovar 2026-09-24T01:26:52,602 copying isovar/allele_read.py -> build/lib/isovar 2026-09-24T01:26:52,604 copying isovar/value_object.py -> build/lib/isovar 2026-09-24T01:26:52,606 copying isovar/read_phasing.py -> build/lib/isovar 2026-09-24T01:26:52,608 copying isovar/aligned_reference_prefix.py -> build/lib/isovar 2026-09-24T01:26:52,610 copying isovar/locus_read.py -> build/lib/isovar 2026-09-24T01:26:52,612 copying isovar/filtering.py -> build/lib/isovar 2026-09-24T01:26:52,614 copying isovar/visualization.py -> build/lib/isovar 2026-09-24T01:26:52,617 copying isovar/fusion_visualization.py -> build/lib/isovar 2026-09-24T01:26:52,619 copying isovar/effect_prediction.py -> build/lib/isovar 2026-09-24T01:26:52,621 copying isovar/common.py -> build/lib/isovar 2026-09-24T01:26:52,623 copying isovar/reference_sequence_key.py -> build/lib/isovar 2026-09-24T01:26:52,625 copying isovar/genetic_code.py -> build/lib/isovar 2026-09-24T01:26:52,627 copying isovar/reference_coding_sequence_key.py -> build/lib/isovar 2026-09-24T01:26:52,630 copying isovar/protein_sequence_helpers.py -> build/lib/isovar 2026-09-24T01:26:52,632 copying isovar/__main__.py -> build/lib/isovar 2026-09-24T01:26:52,633 copying isovar/alignment_score.py -> build/lib/isovar 2026-09-24T01:26:52,636 creating build/lib/isovar/cli 2026-09-24T01:26:52,637 copying isovar/cli/isovar_fusion.py -> build/lib/isovar/cli 2026-09-24T01:26:52,639 copying isovar/cli/commands.py -> build/lib/isovar/cli 2026-09-24T01:26:52,641 copying isovar/cli/isovar_main.py -> build/lib/isovar/cli 2026-09-24T01:26:52,643 copying isovar/cli/main_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,645 copying isovar/cli/protein_sequence_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,647 copying isovar/cli/variant_sequences_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,648 copying isovar/cli/isovar_sv_rna.py -> build/lib/isovar/cli 2026-09-24T01:26:52,651 copying isovar/cli/isovar_allele_counts.py -> build/lib/isovar/cli 2026-09-24T01:26:52,652 copying isovar/cli/isovar_protein_sequences.py -> build/lib/isovar/cli 2026-09-24T01:26:52,654 copying isovar/cli/isovar_variant_reads.py -> build/lib/isovar/cli 2026-09-24T01:26:52,656 copying isovar/cli/rna_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,658 copying isovar/cli/reference_context_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,660 copying isovar/cli/isovar_allele_reads.py -> build/lib/isovar/cli 2026-09-24T01:26:52,662 copying isovar/cli/isovar_reference_contexts.py -> build/lib/isovar/cli 2026-09-24T01:26:52,663 copying isovar/cli/__init__.py -> build/lib/isovar/cli 2026-09-24T01:26:52,665 copying isovar/cli/isovar_variant_sequences.py -> build/lib/isovar/cli 2026-09-24T01:26:52,667 copying isovar/cli/filter_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,669 copying isovar/cli/translation_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,671 copying isovar/cli/isovar_plot.py -> build/lib/isovar/cli 2026-09-24T01:26:52,673 copying isovar/cli/isovar_translations.py -> build/lib/isovar/cli 2026-09-24T01:26:52,675 copying isovar/cli/output_args.py -> build/lib/isovar/cli 2026-09-24T01:26:52,676 running egg_info 2026-09-24T01:26:52,686 writing isovar.egg-info/PKG-INFO 2026-09-24T01:26:52,690 writing dependency_links to isovar.egg-info/dependency_links.txt 2026-09-24T01:26:52,692 writing entry points to isovar.egg-info/entry_points.txt 2026-09-24T01:26:52,694 writing requirements to isovar.egg-info/requires.txt 2026-09-24T01:26:52,695 writing top-level names to isovar.egg-info/top_level.txt 2026-09-24T01:26:52,713 reading manifest file 'isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:52,727 reading manifest template 'MANIFEST.in' 2026-09-24T01:26:52,784 adding license file 'LICENSE' 2026-09-24T01:26:52,796 writing manifest file 'isovar.egg-info/SOURCES.txt' 2026-09-24T01:26:52,805 copying isovar/logging.conf -> build/lib/isovar 2026-09-24T01:26:52,807 creating build/lib/isovar/data 2026-09-24T01:26:52,808 copying isovar/data/osteosarc-test-data-v1.json -> build/lib/isovar/data 2026-09-24T01:26:52,812 copying isovar/data/sid-reads.json.gz -> build/lib/isovar/data 2026-09-24T01:26:52,920 copying isovar/data/sid-read-recipe.json.gz -> build/lib/isovar/data 2026-09-24T01:26:52,952 installing to build/bdist.linux-armv7l/wheel 2026-09-24T01:26:52,953 running install 2026-09-24T01:26:52,975 running install_lib 2026-09-24T01:26:52,980 creating build/bdist.linux-armv7l/wheel 2026-09-24T01:26:52,983 creating build/bdist.linux-armv7l/wheel/isovar 2026-09-24T01:26:52,984 copying build/lib/isovar/string_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,986 copying build/lib/isovar/cell_umi.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,988 copying build/lib/isovar/variant_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,990 copying build/lib/isovar/variant_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,992 copying build/lib/isovar/sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,996 copying build/lib/isovar/variant_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:52,998 copying build/lib/isovar/logging.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,000 copying build/lib/isovar/variant_orf.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,002 copying build/lib/isovar/phasing.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,004 copying build/lib/isovar/logging.conf -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,006 copying build/lib/isovar/variant_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,008 copying build/lib/isovar/chimeric_alignment.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,011 copying build/lib/isovar/read_collector.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,014 copying build/lib/isovar/transcript_assembly_edit.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,016 copying build/lib/isovar/protein_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,018 copying build/lib/isovar/read_lineage.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,021 copying build/lib/isovar/variant_orf_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,023 copying build/lib/isovar/transcript_edit_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,025 copying build/lib/isovar/read_identity.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,027 copying build/lib/isovar/read_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,029 copying build/lib/isovar/assembly.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,032 copying build/lib/isovar/isovar_result.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,035 copying build/lib/isovar/dataframe_builder.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,037 copying build/lib/isovar/main.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,040 copying build/lib/isovar/read_end_inference.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,043 copying build/lib/isovar/transcript_compatibility.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,045 copying build/lib/isovar/fusion.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,048 copying build/lib/isovar/protein_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,051 copying build/lib/isovar/isovar_result_provider.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,053 copying build/lib/isovar/translation_key.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,055 copying build/lib/isovar/protein_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,057 copying build/lib/isovar/translation_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,059 copying build/lib/isovar/default_parameters.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,061 copying build/lib/isovar/sv_rna_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,064 copying build/lib/isovar/dna.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,066 copying build/lib/isovar/sid_data.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,068 copying build/lib/isovar/allele_read_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,071 copying build/lib/isovar/dataframe_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,073 copying build/lib/isovar/osteosarc_data.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,076 copying build/lib/isovar/reference_context.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,077 copying build/lib/isovar/sv_rna_orf_export.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,080 copying build/lib/isovar/mutant_transcript_source.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,082 copying build/lib/isovar/read_metadata.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,084 copying build/lib/isovar/phase_group.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,086 copying build/lib/isovar/translation.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,090 copying build/lib/isovar/reference_context_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,092 copying build/lib/isovar/sv_rna_orfs.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,095 copying build/lib/isovar/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,098 copying build/lib/isovar/allele_read.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,100 copying build/lib/isovar/value_object.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,103 copying build/lib/isovar/read_phasing.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,105 copying build/lib/isovar/aligned_reference_prefix.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,107 copying build/lib/isovar/locus_read.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,109 copying build/lib/isovar/filtering.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,112 copying build/lib/isovar/visualization.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,115 copying build/lib/isovar/fusion_visualization.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,118 copying build/lib/isovar/effect_prediction.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,122 copying build/lib/isovar/common.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,124 copying build/lib/isovar/reference_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,126 copying build/lib/isovar/genetic_code.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,129 creating build/bdist.linux-armv7l/wheel/isovar/data 2026-09-24T01:26:53,130 copying build/lib/isovar/data/sid-reads.json.gz -> build/bdist.linux-armv7l/wheel/./isovar/data 2026-09-24T01:26:53,245 copying build/lib/isovar/data/osteosarc-test-data-v1.json -> build/bdist.linux-armv7l/wheel/./isovar/data 2026-09-24T01:26:53,249 copying build/lib/isovar/data/sid-read-recipe.json.gz -> build/bdist.linux-armv7l/wheel/./isovar/data 2026-09-24T01:26:53,268 copying build/lib/isovar/reference_coding_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,270 copying build/lib/isovar/protein_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,272 copying build/lib/isovar/__main__.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,274 copying build/lib/isovar/alignment_score.py -> build/bdist.linux-armv7l/wheel/./isovar 2026-09-24T01:26:53,276 creating build/bdist.linux-armv7l/wheel/isovar/cli 2026-09-24T01:26:53,277 copying build/lib/isovar/cli/isovar_fusion.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,279 copying build/lib/isovar/cli/commands.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,281 copying build/lib/isovar/cli/isovar_main.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,283 copying build/lib/isovar/cli/main_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,285 copying build/lib/isovar/cli/protein_sequence_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,286 copying build/lib/isovar/cli/variant_sequences_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,288 copying build/lib/isovar/cli/isovar_sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,290 copying build/lib/isovar/cli/isovar_allele_counts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,292 copying build/lib/isovar/cli/isovar_protein_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,294 copying build/lib/isovar/cli/isovar_variant_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,296 copying build/lib/isovar/cli/rna_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,298 copying build/lib/isovar/cli/reference_context_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,300 copying build/lib/isovar/cli/isovar_allele_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,301 copying build/lib/isovar/cli/isovar_reference_contexts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,303 copying build/lib/isovar/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,305 copying build/lib/isovar/cli/isovar_variant_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,307 copying build/lib/isovar/cli/filter_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,309 copying build/lib/isovar/cli/translation_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,311 copying build/lib/isovar/cli/isovar_plot.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,313 copying build/lib/isovar/cli/isovar_translations.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,315 copying build/lib/isovar/cli/output_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli 2026-09-24T01:26:53,317 running install_egg_info 2026-09-24T01:26:53,322 Copying isovar.egg-info to build/bdist.linux-armv7l/wheel/./isovar-1.22.2-py3.11.egg-info 2026-09-24T01:26:53,334 running install_scripts 2026-09-24T01:26:53,349 creating build/bdist.linux-armv7l/wheel/isovar-1.22.2.dist-info/WHEEL 2026-09-24T01:26:53,352 creating '/tmp/pip-wheel-4cyzpj49/.tmp-rpaeh5t4/isovar-1.22.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-09-24T01:26:53,356 adding 'isovar/__init__.py' 2026-09-24T01:26:53,358 adding 'isovar/__main__.py' 2026-09-24T01:26:53,360 adding 'isovar/aligned_reference_prefix.py' 2026-09-24T01:26:53,362 adding 'isovar/alignment_score.py' 2026-09-24T01:26:53,365 adding 'isovar/allele_read.py' 2026-09-24T01:26:53,367 adding 'isovar/allele_read_helpers.py' 2026-09-24T01:26:53,370 adding 'isovar/assembly.py' 2026-09-24T01:26:53,373 adding 'isovar/cell_umi.py' 2026-09-24T01:26:53,376 adding 'isovar/chimeric_alignment.py' 2026-09-24T01:26:53,378 adding 'isovar/common.py' 2026-09-24T01:26:53,380 adding 'isovar/dataframe_builder.py' 2026-09-24T01:26:53,383 adding 'isovar/dataframe_helpers.py' 2026-09-24T01:26:53,385 adding 'isovar/default_parameters.py' 2026-09-24T01:26:53,387 adding 'isovar/dna.py' 2026-09-24T01:26:53,389 adding 'isovar/effect_prediction.py' 2026-09-24T01:26:53,391 adding 'isovar/filtering.py' 2026-09-24T01:26:53,395 adding 'isovar/fusion.py' 2026-09-24T01:26:53,398 adding 'isovar/fusion_visualization.py' 2026-09-24T01:26:53,400 adding 'isovar/genetic_code.py' 2026-09-24T01:26:53,405 adding 'isovar/isovar_result.py' 2026-09-24T01:26:53,407 adding 'isovar/isovar_result_provider.py' 2026-09-24T01:26:53,410 adding 'isovar/locus_read.py' 2026-09-24T01:26:53,411 adding 'isovar/logging.conf' 2026-09-24T01:26:53,413 adding 'isovar/logging.py' 2026-09-24T01:26:53,415 adding 'isovar/main.py' 2026-09-24T01:26:53,417 adding 'isovar/mutant_transcript_source.py' 2026-09-24T01:26:53,419 adding 'isovar/osteosarc_data.py' 2026-09-24T01:26:53,421 adding 'isovar/phase_group.py' 2026-09-24T01:26:53,424 adding 'isovar/phasing.py' 2026-09-24T01:26:53,426 adding 'isovar/protein_comparison.py' 2026-09-24T01:26:53,430 adding 'isovar/protein_sequence.py' 2026-09-24T01:26:53,434 adding 'isovar/protein_sequence_creator.py' 2026-09-24T01:26:53,436 adding 'isovar/protein_sequence_helpers.py' 2026-09-24T01:26:53,443 adding 'isovar/read_collector.py' 2026-09-24T01:26:53,445 adding 'isovar/read_end_inference.py' 2026-09-24T01:26:53,447 adding 'isovar/read_evidence.py' 2026-09-24T01:26:53,449 adding 'isovar/read_identity.py' 2026-09-24T01:26:53,450 adding 'isovar/read_lineage.py' 2026-09-24T01:26:53,451 adding 'isovar/read_metadata.py' 2026-09-24T01:26:53,453 adding 'isovar/read_phasing.py' 2026-09-24T01:26:53,455 adding 'isovar/reference_coding_sequence_key.py' 2026-09-24T01:26:53,456 adding 'isovar/reference_context.py' 2026-09-24T01:26:53,458 adding 'isovar/reference_context_helpers.py' 2026-09-24T01:26:53,459 adding 'isovar/reference_sequence_key.py' 2026-09-24T01:26:53,461 adding 'isovar/sid_data.py' 2026-09-24T01:26:53,462 adding 'isovar/string_helpers.py' 2026-09-24T01:26:53,473 adding 'isovar/sv_rna.py' 2026-09-24T01:26:53,475 adding 'isovar/sv_rna_comparison.py' 2026-09-24T01:26:53,478 adding 'isovar/sv_rna_orf_export.py' 2026-09-24T01:26:53,480 adding 'isovar/sv_rna_orfs.py' 2026-09-24T01:26:53,481 adding 'isovar/transcript_assembly_edit.py' 2026-09-24T01:26:53,482 adding 'isovar/transcript_compatibility.py' 2026-09-24T01:26:53,484 adding 'isovar/transcript_edit_helpers.py' 2026-09-24T01:26:53,485 adding 'isovar/translation.py' 2026-09-24T01:26:53,487 adding 'isovar/translation_helpers.py' 2026-09-24T01:26:53,488 adding 'isovar/translation_key.py' 2026-09-24T01:26:53,490 adding 'isovar/value_object.py' 2026-09-24T01:26:53,491 adding 'isovar/variant_helpers.py' 2026-09-24T01:26:53,493 adding 'isovar/variant_orf.py' 2026-09-24T01:26:53,495 adding 'isovar/variant_orf_helpers.py' 2026-09-24T01:26:53,497 adding 'isovar/variant_sequence.py' 2026-09-24T01:26:53,499 adding 'isovar/variant_sequence_creator.py' 2026-09-24T01:26:53,502 adding 'isovar/variant_sequence_helpers.py' 2026-09-24T01:26:53,507 adding 'isovar/visualization.py' 2026-09-24T01:26:53,509 adding 'isovar/cli/__init__.py' 2026-09-24T01:26:53,511 adding 'isovar/cli/commands.py' 2026-09-24T01:26:53,512 adding 'isovar/cli/filter_args.py' 2026-09-24T01:26:53,513 adding 'isovar/cli/isovar_allele_counts.py' 2026-09-24T01:26:53,515 adding 'isovar/cli/isovar_allele_reads.py' 2026-09-24T01:26:53,516 adding 'isovar/cli/isovar_fusion.py' 2026-09-24T01:26:53,517 adding 'isovar/cli/isovar_main.py' 2026-09-24T01:26:53,519 adding 'isovar/cli/isovar_plot.py' 2026-09-24T01:26:53,520 adding 'isovar/cli/isovar_protein_sequences.py' 2026-09-24T01:26:53,521 adding 'isovar/cli/isovar_reference_contexts.py' 2026-09-24T01:26:53,523 adding 'isovar/cli/isovar_sv_rna.py' 2026-09-24T01:26:53,524 adding 'isovar/cli/isovar_translations.py' 2026-09-24T01:26:53,526 adding 'isovar/cli/isovar_variant_reads.py' 2026-09-24T01:26:53,527 adding 'isovar/cli/isovar_variant_sequences.py' 2026-09-24T01:26:53,528 adding 'isovar/cli/main_args.py' 2026-09-24T01:26:53,530 adding 'isovar/cli/output_args.py' 2026-09-24T01:26:53,531 adding 'isovar/cli/protein_sequence_args.py' 2026-09-24T01:26:53,533 adding 'isovar/cli/reference_context_args.py' 2026-09-24T01:26:53,535 adding 'isovar/cli/rna_args.py' 2026-09-24T01:26:53,537 adding 'isovar/cli/translation_args.py' 2026-09-24T01:26:53,539 adding 'isovar/cli/variant_sequences_args.py' 2026-09-24T01:26:53,548 adding 'isovar/data/osteosarc-test-data-v1.json' 2026-09-24T01:26:53,667 adding 'isovar/data/sid-read-recipe.json.gz' 2026-09-24T01:26:54,339 adding 'isovar/data/sid-reads.json.gz' 2026-09-24T01:26:54,382 adding 'isovar-1.22.2.dist-info/licenses/LICENSE' 2026-09-24T01:26:54,386 adding 'isovar-1.22.2.dist-info/METADATA' 2026-09-24T01:26:54,388 adding 'isovar-1.22.2.dist-info/WHEEL' 2026-09-24T01:26:54,389 adding 'isovar-1.22.2.dist-info/entry_points.txt' 2026-09-24T01:26:54,390 adding 'isovar-1.22.2.dist-info/top_level.txt' 2026-09-24T01:26:54,393 adding 'isovar-1.22.2.dist-info/RECORD' 2026-09-24T01:26:54,499 removing build/bdist.linux-armv7l/wheel 2026-09-24T01:26:54,621 Building wheel for isovar (pyproject.toml): finished with status 'done' 2026-09-24T01:26:54,781 Created wheel for isovar: filename=isovar-1.22.2-py3-none-any.whl size=7610190 sha256=49adafec42cc459e26a3d87b369ae875290e379d88961c144d8418c3f7c1ff9c 2026-09-24T01:26:54,782 Stored in directory: /tmp/pip-ephem-wheel-cache-v1mrk1ry/wheels/e8/10/72/92bc80a67b1890cda5a599b953e56aefcf9f045300693de081 2026-09-24T01:26:54,802 Successfully built isovar 2026-09-24T01:26:55,101 Removed build tracker: '/tmp/pip-build-tracker-kov7j9vt'