2026-09-29T18:33:53,096 Created temporary directory: /tmp/pip-ephem-wheel-cache-g1gs80n_
2026-09-29T18:33:53,098 Created temporary directory: /tmp/pip-build-tracker-knxuyzvb
2026-09-29T18:33:53,099 Initialized build tracking at /tmp/pip-build-tracker-knxuyzvb
2026-09-29T18:33:53,099 Created build tracker: /tmp/pip-build-tracker-knxuyzvb
2026-09-29T18:33:53,100 Entered build tracker: /tmp/pip-build-tracker-knxuyzvb
2026-09-29T18:33:53,101 Created temporary directory: /tmp/pip-wheel-kp2zglen
2026-09-29T18:33:53,103 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-09-29T18:33:53,106 Created temporary directory: /tmp/pip-ephem-wheel-cache-48uc_6xc
2026-09-29T18:33:53,127 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-09-29T18:33:53,131 2 location(s) to search for versions of weirdo:
2026-09-29T18:33:53,131 * https://pypi.org/simple/weirdo/
2026-09-29T18:33:53,131 * https://www.piwheels.org/simple/weirdo/
2026-09-29T18:33:53,131 Fetching project page and analyzing links: https://pypi.org/simple/weirdo/
2026-09-29T18:33:53,132 Getting page https://pypi.org/simple/weirdo/
2026-09-29T18:33:53,133 Found index url https://pypi.org/simple
2026-09-29T18:33:53,387 Fetched page https://pypi.org/simple/weirdo/ as application/vnd.pypi.simple.v1+json
2026-09-29T18:33:53,390   Found link https://files.pythonhosted.org/packages/e1/70/f02435b2ff70c1734076ae5cba91c0098383d4ac61ca5310c2dd879bc8eb/weirdo-1.0.0.macosx-11.1-arm64.tar.gz (from https://pypi.org/simple/weirdo/), version: 1.0.0.macosx-11.1-arm64
2026-09-29T18:33:53,391   Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/db/5b/1ed1b05a9069776f9e75033f935a8302c670899de7f48571cc9e36ae0b52/weirdo-2.1.0-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,392   Found link https://files.pythonhosted.org/packages/99/38/b95e25db2b4ca7f2b6cef3132536bf1ac4fa359e334df4b0be4b55769290/weirdo-2.1.0.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.0
2026-09-29T18:33:53,393   Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/e8/3e/d81b6b6e2439118d2f375ec31991688836ae0743dd492b09b74f27aad6cb/weirdo-2.1.1-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,394   Found link https://files.pythonhosted.org/packages/6d/e7/9ebe5cd8201edbdfe0ade6d30534f05a7071290e025ee428709d459690ba/weirdo-2.1.1.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.1
2026-09-29T18:33:53,395   Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/44/d1/34f6e84eb573c83fac5591e7cb337c03d8db018ff6cbf3e021cc7fc5e237/weirdo-2.1.2-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,396   Found link https://files.pythonhosted.org/packages/2c/a9/74f3892b028cfed8b4e7c76c6cdae64c7533c60bd509037338f1dfde244c/weirdo-2.1.2.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.2
2026-09-29T18:33:53,396   Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/d4/be/002b2c7ee2e53f6f78ab6aca37359252d941634ffbb560e44c1e728b5fa7/weirdo-2.1.3-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,397   Found link https://files.pythonhosted.org/packages/dd/f2/52cb382568fe4a7124a7c3a3e8e706c582d3dbd0a1a70e3ed0b64de98b89/weirdo-2.1.3.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.3
2026-09-29T18:33:53,398   Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/3a/a9/50de4a395ed0d48e5073b040d3bdaf4f28d159cc2f6908fc5a299a232f4d/weirdo-2.1.4-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,399   Found link https://files.pythonhosted.org/packages/b1/1c/54edd5f1b5cc6d5c9a1dd4aaef9e6283f5e0ccd985f02285e0e85f66614c/weirdo-2.1.4.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.4
2026-09-29T18:33:53,400 Fetching project page and analyzing links: https://www.piwheels.org/simple/weirdo/
2026-09-29T18:33:53,401 Getting page https://www.piwheels.org/simple/weirdo/
2026-09-29T18:33:53,402 Found index url https://www.piwheels.org/simple
2026-09-29T18:33:53,610 Fetched page https://www.piwheels.org/simple/weirdo/ as text/html
2026-09-29T18:33:53,613   Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.3-py3-none-any.whl#sha256=ff84ac8d49141b246047de68cd6dd13db19bb1a622f0692b834a5bf0c4bbc482 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,613   Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.2-py3-none-any.whl#sha256=b21550f393d664cc311a1302ae149d7d5e99a964ee3d74e9d5ff36572012ac83 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,614   Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.1-py3-none-any.whl#sha256=cfc6759704a74137305b6abb3571ba04d22b5cacc6034e7d3bd85896ffb6426e (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,614   Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.0-py3-none-any.whl#sha256=d2d02b6afd6ff93c178404f24f360b291375a352dbf7a5f132f6b4f640fe8911 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9)
2026-09-29T18:33:53,615 Skipping link: not a file: https://www.piwheels.org/simple/weirdo/
2026-09-29T18:33:53,615 Skipping link: not a file: https://pypi.org/simple/weirdo/
2026-09-29T18:33:53,635 Given no hashes to check 1 links for project 'weirdo': discarding no candidates
2026-09-29T18:33:53,653 Collecting weirdo==2.1.4
2026-09-29T18:33:53,655   Created temporary directory: /tmp/pip-unpack-ggmatsof
2026-09-29T18:33:53,823   Downloading weirdo-2.1.4.tar.gz (93 kB)
2026-09-29T18:33:54,033   Added weirdo==2.1.4 from https://files.pythonhosted.org/packages/b1/1c/54edd5f1b5cc6d5c9a1dd4aaef9e6283f5e0ccd985f02285e0e85f66614c/weirdo-2.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-knxuyzvb'
2026-09-29T18:33:54,038   Created temporary directory: /tmp/pip-build-env-2s8v9sn5
2026-09-29T18:33:54,043   Installing build dependencies: started
2026-09-29T18:33:54,044   Running command pip subprocess to install build dependencies
2026-09-29T18:33:55,186   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-09-29T18:33:55,618   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-09-29T18:33:55,640   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-09-29T18:33:57,472   Collecting setuptools>=64
2026-09-29T18:33:57,473     Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata
2026-09-29T18:33:57,487     Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-09-29T18:33:57,726   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-09-29T18:33:57,819   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-09-29T18:34:00,560   Installing collected packages: setuptools
2026-09-29T18:34:02,791   Successfully installed setuptools-84.0.0
2026-09-29T18:34:03,063   Installing build dependencies: finished with status 'done'
2026-09-29T18:34:03,069   Getting requirements to build wheel: started
2026-09-29T18:34:03,070   Running command Getting requirements to build wheel
2026-09-29T18:34:03,758   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:03,758   !!

2026-09-29T18:34:03,759           ********************************************************************************
2026-09-29T18:34:03,759           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:03,760           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:03,761           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:03,761           ********************************************************************************

2026-09-29T18:34:03,762   !!
2026-09-29T18:34:03,763     dist._finalize_license_expression()
2026-09-29T18:34:03,765   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:03,765   !!

2026-09-29T18:34:03,766           ********************************************************************************
2026-09-29T18:34:03,766           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:03,768           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:03,769           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:03,769           ********************************************************************************

2026-09-29T18:34:03,771   !!
2026-09-29T18:34:03,771     self._finalize_license_expression()
2026-09-29T18:34:03,774   running egg_info
2026-09-29T18:34:03,780   writing weirdo.egg-info/PKG-INFO
2026-09-29T18:34:03,787   writing dependency_links to weirdo.egg-info/dependency_links.txt
2026-09-29T18:34:03,789   writing entry points to weirdo.egg-info/entry_points.txt
2026-09-29T18:34:03,793   writing requirements to weirdo.egg-info/requires.txt
2026-09-29T18:34:03,794   writing top-level names to weirdo.egg-info/top_level.txt
2026-09-29T18:34:03,820   reading manifest file 'weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:03,825   reading manifest template 'MANIFEST.in'
2026-09-29T18:34:03,826   adding license file 'LICENSE'
2026-09-29T18:34:03,831   writing manifest file 'weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:03,931   Getting requirements to build wheel: finished with status 'done'
2026-09-29T18:34:03,934   Created temporary directory: /tmp/pip-modern-metadata-na3sl88v
2026-09-29T18:34:03,936   Preparing metadata (pyproject.toml): started
2026-09-29T18:34:03,938   Running command Preparing metadata (pyproject.toml)
2026-09-29T18:34:04,590   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:04,590   !!

2026-09-29T18:34:04,591           ********************************************************************************
2026-09-29T18:34:04,592           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:04,593           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:04,594           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:04,595           ********************************************************************************

2026-09-29T18:34:04,596   !!
2026-09-29T18:34:04,597     dist._finalize_license_expression()
2026-09-29T18:34:04,598   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:04,599   !!

2026-09-29T18:34:04,600           ********************************************************************************
2026-09-29T18:34:04,600           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:04,601           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:04,602           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:04,603           ********************************************************************************

2026-09-29T18:34:04,603   !!
2026-09-29T18:34:04,604     self._finalize_license_expression()
2026-09-29T18:34:04,605   running dist_info
2026-09-29T18:34:04,615   creating /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info
2026-09-29T18:34:04,616   writing /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/PKG-INFO
2026-09-29T18:34:04,623   writing dependency_links to /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/dependency_links.txt
2026-09-29T18:34:04,625   writing entry points to /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/entry_points.txt
2026-09-29T18:34:04,628   writing requirements to /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/requires.txt
2026-09-29T18:34:04,629   writing top-level names to /tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/top_level.txt
2026-09-29T18:34:04,631   writing manifest file '/tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:04,653   reading manifest file '/tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:04,655   reading manifest template 'MANIFEST.in'
2026-09-29T18:34:04,655   adding license file 'LICENSE'
2026-09-29T18:34:04,660   writing manifest file '/tmp/pip-modern-metadata-na3sl88v/weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:04,661   creating '/tmp/pip-modern-metadata-na3sl88v/weirdo-2.1.4.dist-info'
2026-09-29T18:34:04,788   Preparing metadata (pyproject.toml): finished with status 'done'
2026-09-29T18:34:04,793   Source in /tmp/pip-wheel-kp2zglen/weirdo_e16a44a8e28d477d982c771260727941 has version 2.1.4, which satisfies requirement weirdo==2.1.4 from https://files.pythonhosted.org/packages/b1/1c/54edd5f1b5cc6d5c9a1dd4aaef9e6283f5e0ccd985f02285e0e85f66614c/weirdo-2.1.4.tar.gz
2026-09-29T18:34:04,794   Removed weirdo==2.1.4 from https://files.pythonhosted.org/packages/b1/1c/54edd5f1b5cc6d5c9a1dd4aaef9e6283f5e0ccd985f02285e0e85f66614c/weirdo-2.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-knxuyzvb'
2026-09-29T18:34:04,800 Created temporary directory: /tmp/pip-unpack-o_fzzbh5
2026-09-29T18:34:04,801 Building wheels for collected packages: weirdo
2026-09-29T18:34:04,805   Created temporary directory: /tmp/pip-wheel-pg75dx40
2026-09-29T18:34:04,806   Destination directory: /tmp/pip-wheel-pg75dx40
2026-09-29T18:34:04,808   Building wheel for weirdo (pyproject.toml): started
2026-09-29T18:34:04,809   Running command Building wheel for weirdo (pyproject.toml)
2026-09-29T18:34:05,440   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:05,440   !!

2026-09-29T18:34:05,441           ********************************************************************************
2026-09-29T18:34:05,442           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:05,443           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:05,445           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:05,445           ********************************************************************************

2026-09-29T18:34:05,447   !!
2026-09-29T18:34:05,447     dist._finalize_license_expression()
2026-09-29T18:34:05,448   /tmp/pip-build-env-2s8v9sn5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-09-29T18:34:05,449   !!

2026-09-29T18:34:05,450           ********************************************************************************
2026-09-29T18:34:05,450           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-09-29T18:34:05,451           License :: OSI Approved :: Apache Software License

2026-09-29T18:34:05,452           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-09-29T18:34:05,453           ********************************************************************************

2026-09-29T18:34:05,454   !!
2026-09-29T18:34:05,454     self._finalize_license_expression()
2026-09-29T18:34:05,455   running bdist_wheel
2026-09-29T18:34:05,466   running build
2026-09-29T18:34:05,466   running build_py
2026-09-29T18:34:05,472   creating build/lib/weirdo
2026-09-29T18:34:05,474   copying weirdo/reduced_alphabet.py -> build/lib/weirdo
2026-09-29T18:34:05,476   copying weirdo/distances.py -> build/lib/weirdo
2026-09-29T18:34:05,478   copying weirdo/__init__.py -> build/lib/weirdo
2026-09-29T18:34:05,480   copying weirdo/residue_contact_energies.py -> build/lib/weirdo
2026-09-29T18:34:05,482   copying weirdo/model_manager.py -> build/lib/weirdo
2026-09-29T18:34:05,484   copying weirdo/amino_acid_alphabet.py -> build/lib/weirdo
2026-09-29T18:34:05,487   copying weirdo/peptide_vectorizer.py -> build/lib/weirdo
2026-09-29T18:34:05,489   copying weirdo/pmbec.py -> build/lib/weirdo
2026-09-29T18:34:05,491   copying weirdo/common.py -> build/lib/weirdo
2026-09-29T18:34:05,492   copying weirdo/api.py -> build/lib/weirdo
2026-09-29T18:34:05,495   copying weirdo/chou_fasman.py -> build/lib/weirdo
2026-09-29T18:34:05,497   copying weirdo/static_data.py -> build/lib/weirdo
2026-09-29T18:34:05,498   copying weirdo/blosum.py -> build/lib/weirdo
2026-09-29T18:34:05,500   copying weirdo/cli.py -> build/lib/weirdo
2026-09-29T18:34:05,503   copying weirdo/data_manager.py -> build/lib/weirdo
2026-09-29T18:34:05,505   copying weirdo/amino_acid.py -> build/lib/weirdo
2026-09-29T18:34:05,507   copying weirdo/amino_acid_properties.py -> build/lib/weirdo
2026-09-29T18:34:05,510   creating build/lib/scripts
2026-09-29T18:34:05,511   copying scripts/train_modal_long_run.py -> build/lib/scripts
2026-09-29T18:34:05,514   creating build/lib/weirdo/scorers
2026-09-29T18:34:05,515   copying weirdo/scorers/base.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,517   copying weirdo/scorers/config.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,520   copying weirdo/scorers/__init__.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,522   copying weirdo/scorers/mlp.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,525   copying weirdo/scorers/swissprot.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,528   copying weirdo/scorers/registry.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,530   copying weirdo/scorers/reference.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,532   copying weirdo/scorers/similarity.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,534   copying weirdo/scorers/trainable.py -> build/lib/weirdo/scorers
2026-09-29T18:34:05,537   creating build/lib/weirdo/matrices
2026-09-29T18:34:05,539   copying weirdo/matrices/__init__.py -> build/lib/weirdo/matrices
2026-09-29T18:34:05,540   running egg_info
2026-09-29T18:34:05,550   writing weirdo.egg-info/PKG-INFO
2026-09-29T18:34:05,556   writing dependency_links to weirdo.egg-info/dependency_links.txt
2026-09-29T18:34:05,557   writing entry points to weirdo.egg-info/entry_points.txt
2026-09-29T18:34:05,561   writing requirements to weirdo.egg-info/requires.txt
2026-09-29T18:34:05,562   writing top-level names to weirdo.egg-info/top_level.txt
2026-09-29T18:34:05,575   reading manifest file 'weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:05,580   reading manifest template 'MANIFEST.in'
2026-09-29T18:34:05,581   adding license file 'LICENSE'
2026-09-29T18:34:05,585   writing manifest file 'weirdo.egg-info/SOURCES.txt'
2026-09-29T18:34:05,591   copying weirdo/matrices/helix_vs_coil.txt -> build/lib/weirdo/matrices
2026-09-29T18:34:05,593   copying weirdo/matrices/BLOSUM50 -> build/lib/weirdo/matrices
2026-09-29T18:34:05,596   copying weirdo/matrices/strand_vs_coil.txt -> build/lib/weirdo/matrices
2026-09-29T18:34:05,598   copying weirdo/matrices/BLOSUM62 -> build/lib/weirdo/matrices
2026-09-29T18:34:05,601   copying weirdo/matrices/BLOSUM30 -> build/lib/weirdo/matrices
2026-09-29T18:34:05,603   copying weirdo/matrices/pmbec.mat -> build/lib/weirdo/matrices
2026-09-29T18:34:05,605   copying weirdo/matrices/amino_acid_properties.txt -> build/lib/weirdo/matrices
2026-09-29T18:34:05,608   copying weirdo/matrices/helix_vs_strand.txt -> build/lib/weirdo/matrices
2026-09-29T18:34:05,624   installing to build/bdist.linux-armv7l/wheel
2026-09-29T18:34:05,624   running install
2026-09-29T18:34:05,647   running install_lib
2026-09-29T18:34:05,652   creating build/bdist.linux-armv7l/wheel
2026-09-29T18:34:05,654   creating build/bdist.linux-armv7l/wheel/weirdo
2026-09-29T18:34:05,655   copying build/lib/weirdo/reduced_alphabet.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,658   copying build/lib/weirdo/distances.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,660   copying build/lib/weirdo/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,662   creating build/bdist.linux-armv7l/wheel/weirdo/scorers
2026-09-29T18:34:05,663   copying build/lib/weirdo/scorers/base.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,666   copying build/lib/weirdo/scorers/config.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,669   copying build/lib/weirdo/scorers/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,671   copying build/lib/weirdo/scorers/mlp.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,674   copying build/lib/weirdo/scorers/swissprot.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,677   copying build/lib/weirdo/scorers/registry.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,679   copying build/lib/weirdo/scorers/reference.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,682   copying build/lib/weirdo/scorers/similarity.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,684   copying build/lib/weirdo/scorers/trainable.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers
2026-09-29T18:34:05,686   copying build/lib/weirdo/residue_contact_energies.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,688   copying build/lib/weirdo/model_manager.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,691   copying build/lib/weirdo/amino_acid_alphabet.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,693   copying build/lib/weirdo/peptide_vectorizer.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,695   copying build/lib/weirdo/pmbec.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,697   copying build/lib/weirdo/common.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,699   copying build/lib/weirdo/api.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,701   copying build/lib/weirdo/chou_fasman.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,704   creating build/bdist.linux-armv7l/wheel/weirdo/matrices
2026-09-29T18:34:05,705   copying build/lib/weirdo/matrices/helix_vs_coil.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,708   copying build/lib/weirdo/matrices/BLOSUM50 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,710   copying build/lib/weirdo/matrices/strand_vs_coil.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,712   copying build/lib/weirdo/matrices/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,714   copying build/lib/weirdo/matrices/BLOSUM62 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,716   copying build/lib/weirdo/matrices/BLOSUM30 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,718   copying build/lib/weirdo/matrices/pmbec.mat -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,720   copying build/lib/weirdo/matrices/amino_acid_properties.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,722   copying build/lib/weirdo/matrices/helix_vs_strand.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices
2026-09-29T18:34:05,724   copying build/lib/weirdo/static_data.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,726   copying build/lib/weirdo/blosum.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,728   copying build/lib/weirdo/cli.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,731   copying build/lib/weirdo/data_manager.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,733   copying build/lib/weirdo/amino_acid.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,735   copying build/lib/weirdo/amino_acid_properties.py -> build/bdist.linux-armv7l/wheel/./weirdo
2026-09-29T18:34:05,738   creating build/bdist.linux-armv7l/wheel/scripts
2026-09-29T18:34:05,739   copying build/lib/scripts/train_modal_long_run.py -> build/bdist.linux-armv7l/wheel/./scripts
2026-09-29T18:34:05,742   running install_egg_info
2026-09-29T18:34:05,747   Copying weirdo.egg-info to build/bdist.linux-armv7l/wheel/./weirdo-2.1.4-py3.11.egg-info
2026-09-29T18:34:05,760   running install_scripts
2026-09-29T18:34:05,773   creating build/bdist.linux-armv7l/wheel/weirdo-2.1.4.dist-info/WHEEL
2026-09-29T18:34:05,776   creating '/tmp/pip-wheel-pg75dx40/.tmp-bsn0kevo/weirdo-2.1.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-09-29T18:34:05,779   adding 'scripts/train_modal_long_run.py'
2026-09-29T18:34:05,781   adding 'weirdo/__init__.py'
2026-09-29T18:34:05,782   adding 'weirdo/amino_acid.py'
2026-09-29T18:34:05,784   adding 'weirdo/amino_acid_alphabet.py'
2026-09-29T18:34:05,786   adding 'weirdo/amino_acid_properties.py'
2026-09-29T18:34:05,788   adding 'weirdo/api.py'
2026-09-29T18:34:05,789   adding 'weirdo/blosum.py'
2026-09-29T18:34:05,791   adding 'weirdo/chou_fasman.py'
2026-09-29T18:34:05,794   adding 'weirdo/cli.py'
2026-09-29T18:34:05,795   adding 'weirdo/common.py'
2026-09-29T18:34:05,798   adding 'weirdo/data_manager.py'
2026-09-29T18:34:05,799   adding 'weirdo/distances.py'
2026-09-29T18:34:05,801   adding 'weirdo/model_manager.py'
2026-09-29T18:34:05,802   adding 'weirdo/peptide_vectorizer.py'
2026-09-29T18:34:05,804   adding 'weirdo/pmbec.py'
2026-09-29T18:34:05,805   adding 'weirdo/reduced_alphabet.py'
2026-09-29T18:34:05,807   adding 'weirdo/residue_contact_energies.py'
2026-09-29T18:34:05,808   adding 'weirdo/static_data.py'
2026-09-29T18:34:05,810   adding 'weirdo/matrices/BLOSUM30'
2026-09-29T18:34:05,811   adding 'weirdo/matrices/BLOSUM50'
2026-09-29T18:34:05,813   adding 'weirdo/matrices/BLOSUM62'
2026-09-29T18:34:05,814   adding 'weirdo/matrices/__init__.py'
2026-09-29T18:34:05,816   adding 'weirdo/matrices/amino_acid_properties.txt'
2026-09-29T18:34:05,818   adding 'weirdo/matrices/helix_vs_coil.txt'
2026-09-29T18:34:05,820   adding 'weirdo/matrices/helix_vs_strand.txt'
2026-09-29T18:34:05,821   adding 'weirdo/matrices/pmbec.mat'
2026-09-29T18:34:05,823   adding 'weirdo/matrices/strand_vs_coil.txt'
2026-09-29T18:34:05,825   adding 'weirdo/scorers/__init__.py'
2026-09-29T18:34:05,827   adding 'weirdo/scorers/base.py'
2026-09-29T18:34:05,828   adding 'weirdo/scorers/config.py'
2026-09-29T18:34:05,836   adding 'weirdo/scorers/mlp.py'
2026-09-29T18:34:05,838   adding 'weirdo/scorers/reference.py'
2026-09-29T18:34:05,840   adding 'weirdo/scorers/registry.py'
2026-09-29T18:34:05,842   adding 'weirdo/scorers/similarity.py'
2026-09-29T18:34:05,844   adding 'weirdo/scorers/swissprot.py'
2026-09-29T18:34:05,846   adding 'weirdo/scorers/trainable.py'
2026-09-29T18:34:05,850   adding 'weirdo-2.1.4.dist-info/licenses/LICENSE'
2026-09-29T18:34:05,852   adding 'weirdo-2.1.4.dist-info/METADATA'
2026-09-29T18:34:05,853   adding 'weirdo-2.1.4.dist-info/WHEEL'
2026-09-29T18:34:05,854   adding 'weirdo-2.1.4.dist-info/entry_points.txt'
2026-09-29T18:34:05,854   adding 'weirdo-2.1.4.dist-info/top_level.txt'
2026-09-29T18:34:05,856   adding 'weirdo-2.1.4.dist-info/RECORD'
2026-09-29T18:34:05,858   removing build/bdist.linux-armv7l/wheel
2026-09-29T18:34:05,969   Building wheel for weirdo (pyproject.toml): finished with status 'done'
2026-09-29T18:34:05,976   Created wheel for weirdo: filename=weirdo-2.1.4-py3-none-any.whl size=90798 sha256=a9a3bd49df0a0f1fd85d6433edbe1732111a85876a7b11ac95d6867b992621e2
2026-09-29T18:34:05,977   Stored in directory: /tmp/pip-ephem-wheel-cache-48uc_6xc/wheels/a8/d0/0c/5567abfa789b5a401063d8f52394bf6502664f05401f517dac
2026-09-29T18:34:05,991 Successfully built weirdo
2026-09-29T18:34:05,997 Removed build tracker: '/tmp/pip-build-tracker-knxuyzvb'