2026-10-03T13:27:48,752 Created temporary directory: /tmp/pip-ephem-wheel-cache-w27wtaxn 2026-10-03T13:27:48,754 Created temporary directory: /tmp/pip-build-tracker-n7wo_8nk 2026-10-03T13:27:48,754 Initialized build tracking at /tmp/pip-build-tracker-n7wo_8nk 2026-10-03T13:27:48,755 Created build tracker: /tmp/pip-build-tracker-n7wo_8nk 2026-10-03T13:27:48,755 Entered build tracker: /tmp/pip-build-tracker-n7wo_8nk 2026-10-03T13:27:48,756 Created temporary directory: /tmp/pip-wheel-qt3o7w6s 2026-10-03T13:27:48,759 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-03T13:27:48,761 Created temporary directory: /tmp/pip-ephem-wheel-cache-oy82ding 2026-10-03T13:27:48,784 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-03T13:27:48,787 2 location(s) to search for versions of osteosarc: 2026-10-03T13:27:48,787 * https://pypi.org/simple/osteosarc/ 2026-10-03T13:27:48,787 * https://www.piwheels.org/simple/osteosarc/ 2026-10-03T13:27:48,788 Fetching project page and analyzing links: https://pypi.org/simple/osteosarc/ 2026-10-03T13:27:48,789 Getting page https://pypi.org/simple/osteosarc/ 2026-10-03T13:27:48,790 Found index url https://pypi.org/simple 2026-10-03T13:27:48,946 Fetched page https://pypi.org/simple/osteosarc/ as application/vnd.pypi.simple.v1+json 2026-10-03T13:27:48,961 Skipping link: No binaries permitted for osteosarc: 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2026-10-03T13:27:48,965 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/a6/a3/7e8637600b2bd759c51437a45adf5295c2928d7c9c90eec972a9cdda967a/osteosarc-0.1.2-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:48,966 Found link https://files.pythonhosted.org/packages/ae/5c/35948f5f593f53261423cab3de28ba2ec7fd2ec991114e5209de82ac96ac/osteosarc-0.1.2.tar.gz (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.10), version: 0.1.2 2026-10-03T13:27:48,967 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/d6/5d/71f9404c3658b5e3517b082d815276fcfd5206c5c5eff06eb9512160252e/osteosarc-0.1.3-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:48,968 Found link https://files.pythonhosted.org/packages/90/48/3248fa8aed387c390e5d364189299cd99d1893872ef2228bc4a672ad4af2/osteosarc-0.1.3.tar.gz (from 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2026-10-03T13:27:48,983 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/e0/d0/1466ee92ffa1ff22b43066e67d0d4165190fead8a98fe3b9628a4b3143c3/osteosarc-0.2.6-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:48,985 Found link https://files.pythonhosted.org/packages/da/3c/628e351e6c6b57fc24905c8797cc58758dc382b0b18dee34a0fdc6bf199a/osteosarc-0.2.6.tar.gz (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9), version: 0.2.6 2026-10-03T13:27:48,986 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/33/1a/f883b12ce0a44f176ffe3de7365004a39f302cdecaced43bbbacb1502fb9/osteosarc-0.3.0-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:48,987 Found link https://files.pythonhosted.org/packages/4d/70/f139e4261395b02fe136e95531309b3650b3ffd53e1db2df4679b6862e69/osteosarc-0.3.0.tar.gz (from 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(requires-python:>=3.9) 2026-10-03T13:27:48,995 Found link https://files.pythonhosted.org/packages/79/36/16e9adfc64c0e79a732b2448f645450d14e9cda441eb2fecc912b5d1f97f/osteosarc-0.6.1.tar.gz (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9), version: 0.6.1 2026-10-03T13:27:48,995 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/60/f5/9d3a27359abbe18067debf922e7700fb362a224151ac4807948e61295a2f/osteosarc-0.7.0-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:48,996 Found link https://files.pythonhosted.org/packages/03/22/df9ccd9965fb1590823565c6133799e828fdd2592b77ed01681fc0f7b23a/osteosarc-0.7.0.tar.gz (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9), version: 0.7.0 2026-10-03T13:27:48,997 Skipping link: No binaries permitted for osteosarc: 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2026-10-03T13:27:49,000 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/20/5f/11a09aef2682e0b5acce1c8fe6903875f6075b631694cf996b84c5bdd78c/osteosarc-0.10.0-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:49,002 Found link https://files.pythonhosted.org/packages/47/2c/65abeae66b9dab269a809a392e1ca9d82fd111c297b380b0e1c452638cd8/osteosarc-0.10.0.tar.gz (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9), version: 0.10.0 2026-10-03T13:27:49,002 Skipping link: No binaries permitted for osteosarc: https://files.pythonhosted.org/packages/48/6e/f6419dd4f871ec5a734842e138257efd6dfab76d5911b76dac1864300ef0/osteosarc-0.11.0-py3-none-any.whl (from https://pypi.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:49,003 Found link https://files.pythonhosted.org/packages/41/1f/cecc0d7f424f1c6a809311d96928be56a15639831d1914f39befa0037bc9/osteosarc-0.11.0.tar.gz (from 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https://www.piwheels.org/simple/osteosarc/osteosarc-0.2.4-py3-none-any.whl#sha256=3ea7630d457bfe920315c07e2bd0e966587a6e41b8f6fa257d4174ff156684fc (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:49,746 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.2.3-py3-none-any.whl#sha256=f4e3b8a806442cd1f9ee963a7141d4300cd427a9ec89bf02d3f74464d804e340 (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.9) 2026-10-03T13:27:49,746 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.2.2-py3-none-any.whl#sha256=c67ad957cd6ba403e7f1bf89bb1d6d65c8004f899ff1b40c5dbe4d854b03579c (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,747 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.2.1-py3-none-any.whl#sha256=920a1b1d1a0f979ff1f0c2e585e2e97d7ef13fc397106bf96b1105820b736456 (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,748 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.2.0-py3-none-any.whl#sha256=7f52aee8d9b6fc856bff455e8be955d62799e9c4f7122f20796fe742dd954f3b (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,748 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.1.4-py3-none-any.whl#sha256=1b25b08e8885afa02b2621414f901690854462d74dff0d558eb342aa24f6722f (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,749 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.1.3-py3-none-any.whl#sha256=46c571e0e7e88dbb7e80de4ee8849441ed2160ae05bed61a8982da78059025e2 (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,749 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.1.2-py3-none-any.whl#sha256=265ae55293893f0b8a80fefd12128fbf1dee9ad824745531eeeb65307cdef78c (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,750 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.1.1-py3-none-any.whl#sha256=a780c45ce7817763a6bb6973fada0b50aa8c99a258afac53a4709df13ffe5b2f (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,750 Skipping link: No binaries permitted for osteosarc: https://www.piwheels.org/simple/osteosarc/osteosarc-0.1.0-py3-none-any.whl#sha256=8584ba812290785501ad66e464d461337b0326318c2873c95d18b7a429c8ae1e (from https://www.piwheels.org/simple/osteosarc/) (requires-python:>=3.10) 2026-10-03T13:27:49,751 Skipping link: not a file: https://www.piwheels.org/simple/osteosarc/ 2026-10-03T13:27:49,751 Skipping link: not a file: https://pypi.org/simple/osteosarc/ 2026-10-03T13:27:49,775 Given no hashes to check 1 links for project 'osteosarc': discarding no candidates 2026-10-03T13:27:49,793 Collecting osteosarc==0.15.4 2026-10-03T13:27:49,796 Created temporary directory: /tmp/pip-unpack-1mvgyrxb 2026-10-03T13:27:49,949 Downloading osteosarc-0.15.4.tar.gz (5.3 MB) 2026-10-03T13:27:51,219 Added osteosarc==0.15.4 from https://files.pythonhosted.org/packages/c6/e0/753b9da243fd87d237e8ac9112999aa3446350fa0e2a4754bc4e75b49c2d/osteosarc-0.15.4.tar.gz to build tracker '/tmp/pip-build-tracker-n7wo_8nk' 2026-10-03T13:27:51,224 Created temporary directory: /tmp/pip-build-env-9ydwu8pk 2026-10-03T13:27:51,229 Installing build dependencies: started 2026-10-03T13:27:51,230 Running command pip subprocess to install build dependencies 2026-10-03T13:27:52,371 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-10-03T13:27:52,853 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-03T13:27:52,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-03T13:27:54,670 Collecting setuptools>=77 2026-10-03T13:27:54,671 Obtaining dependency information for setuptools>=77 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata 2026-10-03T13:27:54,685 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-10-03T13:27:54,922 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-10-03T13:27:55,010 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-10-03T13:27:57,757 Installing collected packages: setuptools 2026-10-03T13:28:00,269 Successfully installed setuptools-84.0.0 2026-10-03T13:28:00,539 Installing build dependencies: finished with status 'done' 2026-10-03T13:28:00,545 Getting requirements to build wheel: started 2026-10-03T13:28:00,546 Running command Getting requirements to build wheel 2026-10-03T13:28:01,282 running egg_info 2026-10-03T13:28:01,288 writing osteosarc.egg-info/PKG-INFO 2026-10-03T13:28:01,293 writing dependency_links to osteosarc.egg-info/dependency_links.txt 2026-10-03T13:28:01,295 writing entry points to osteosarc.egg-info/entry_points.txt 2026-10-03T13:28:01,297 writing requirements to osteosarc.egg-info/requires.txt 2026-10-03T13:28:01,299 writing top-level names to osteosarc.egg-info/top_level.txt 2026-10-03T13:28:01,325 reading manifest file 'osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:01,336 reading manifest template 'MANIFEST.in' 2026-10-03T13:28:01,722 adding license file 'LICENSE' 2026-10-03T13:28:01,732 writing manifest file 'osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:01,831 Getting requirements to build wheel: finished with status 'done' 2026-10-03T13:28:01,834 Created temporary directory: /tmp/pip-modern-metadata-k4k1b2qz 2026-10-03T13:28:01,837 Preparing metadata (pyproject.toml): started 2026-10-03T13:28:01,838 Running command Preparing metadata (pyproject.toml) 2026-10-03T13:28:02,513 running dist_info 2026-10-03T13:28:02,524 creating /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info 2026-10-03T13:28:02,525 writing /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/PKG-INFO 2026-10-03T13:28:02,531 writing dependency_links to /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/dependency_links.txt 2026-10-03T13:28:02,532 writing entry points to /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/entry_points.txt 2026-10-03T13:28:02,535 writing requirements to /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/requires.txt 2026-10-03T13:28:02,536 writing top-level names to /tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/top_level.txt 2026-10-03T13:28:02,538 writing manifest file '/tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:02,561 reading manifest file '/tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:02,563 reading manifest template 'MANIFEST.in' 2026-10-03T13:28:02,831 adding license file 'LICENSE' 2026-10-03T13:28:02,839 writing manifest file '/tmp/pip-modern-metadata-k4k1b2qz/osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:02,840 creating '/tmp/pip-modern-metadata-k4k1b2qz/osteosarc-0.15.4.dist-info' 2026-10-03T13:28:02,967 Preparing metadata (pyproject.toml): finished with status 'done' 2026-10-03T13:28:02,972 Source in /tmp/pip-wheel-qt3o7w6s/osteosarc_9de6f687ade9426790865d53ab335219 has version 0.15.4, which satisfies requirement osteosarc==0.15.4 from https://files.pythonhosted.org/packages/c6/e0/753b9da243fd87d237e8ac9112999aa3446350fa0e2a4754bc4e75b49c2d/osteosarc-0.15.4.tar.gz 2026-10-03T13:28:02,973 Removed osteosarc==0.15.4 from https://files.pythonhosted.org/packages/c6/e0/753b9da243fd87d237e8ac9112999aa3446350fa0e2a4754bc4e75b49c2d/osteosarc-0.15.4.tar.gz from build tracker '/tmp/pip-build-tracker-n7wo_8nk' 2026-10-03T13:28:02,979 Created temporary directory: /tmp/pip-unpack-18fig737 2026-10-03T13:28:02,980 Building wheels for collected packages: osteosarc 2026-10-03T13:28:02,984 Created temporary directory: /tmp/pip-wheel-p20r1_x_ 2026-10-03T13:28:02,984 Destination directory: /tmp/pip-wheel-p20r1_x_ 2026-10-03T13:28:02,987 Building wheel for osteosarc (pyproject.toml): started 2026-10-03T13:28:02,988 Running command Building wheel for osteosarc (pyproject.toml) 2026-10-03T13:28:03,651 running bdist_wheel 2026-10-03T13:28:03,669 running build 2026-10-03T13:28:03,669 running build_py 2026-10-03T13:28:03,676 creating build/lib/osteosarc 2026-10-03T13:28:03,678 copying osteosarc/shared.py -> build/lib/osteosarc 2026-10-03T13:28:03,682 copying osteosarc/dataset.py -> build/lib/osteosarc 2026-10-03T13:28:03,685 copying osteosarc/views.py -> build/lib/osteosarc 2026-10-03T13:28:03,687 copying osteosarc/timeline.py -> build/lib/osteosarc 2026-10-03T13:28:03,690 copying osteosarc/urls.py -> build/lib/osteosarc 2026-10-03T13:28:03,692 copying osteosarc/parsing.py -> build/lib/osteosarc 2026-10-03T13:28:03,694 copying osteosarc/cli.py -> build/lib/osteosarc 2026-10-03T13:28:03,697 copying osteosarc/fixtures.py -> build/lib/osteosarc 2026-10-03T13:28:03,699 copying osteosarc/reads.py -> build/lib/osteosarc 2026-10-03T13:28:03,702 copying osteosarc/read_receipts.py -> build/lib/osteosarc 2026-10-03T13:28:03,705 copying osteosarc/bundles.py -> build/lib/osteosarc 2026-10-03T13:28:03,707 copying osteosarc/saved.py -> build/lib/osteosarc 2026-10-03T13:28:03,710 copying osteosarc/sv_candidates.py -> build/lib/osteosarc 2026-10-03T13:28:03,711 copying osteosarc/alleles.py -> build/lib/osteosarc 2026-10-03T13:28:03,714 copying osteosarc/catalog.py -> build/lib/osteosarc 2026-10-03T13:28:03,716 copying osteosarc/retrieval.py -> build/lib/osteosarc 2026-10-03T13:28:03,718 copying osteosarc/__main__.py -> build/lib/osteosarc 2026-10-03T13:28:03,720 copying osteosarc/__init__.py -> build/lib/osteosarc 2026-10-03T13:28:03,722 copying osteosarc/cache.py -> build/lib/osteosarc 2026-10-03T13:28:03,725 copying osteosarc/errors.py -> build/lib/osteosarc 2026-10-03T13:28:03,727 copying osteosarc/records.py -> build/lib/osteosarc 2026-10-03T13:28:03,729 copying osteosarc/fixture_assets.py -> build/lib/osteosarc 2026-10-03T13:28:03,731 copying osteosarc/cohort_bundle.py -> build/lib/osteosarc 2026-10-03T13:28:03,734 copying osteosarc/corpus.py -> build/lib/osteosarc 2026-10-03T13:28:03,736 copying osteosarc/recovery.py -> build/lib/osteosarc 2026-10-03T13:28:03,739 copying osteosarc/reference.py -> build/lib/osteosarc 2026-10-03T13:28:03,741 copying osteosarc/display.py -> build/lib/osteosarc 2026-10-03T13:28:03,743 copying osteosarc/curation.py -> build/lib/osteosarc 2026-10-03T13:28:03,746 copying osteosarc/models.py -> build/lib/osteosarc 2026-10-03T13:28:03,749 copying osteosarc/provenance.py -> build/lib/osteosarc 2026-10-03T13:28:03,751 copying osteosarc/discovery.py -> build/lib/osteosarc 2026-10-03T13:28:03,754 running egg_info 2026-10-03T13:28:03,764 writing osteosarc.egg-info/PKG-INFO 2026-10-03T13:28:03,768 writing dependency_links to osteosarc.egg-info/dependency_links.txt 2026-10-03T13:28:03,770 writing entry points to osteosarc.egg-info/entry_points.txt 2026-10-03T13:28:03,772 writing requirements to osteosarc.egg-info/requires.txt 2026-10-03T13:28:03,773 writing top-level names to osteosarc.egg-info/top_level.txt 2026-10-03T13:28:03,787 reading manifest file 'osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:03,798 reading manifest template 'MANIFEST.in' 2026-10-03T13:28:04,048 adding license file 'LICENSE' 2026-10-03T13:28:04,057 writing manifest file 'osteosarc.egg-info/SOURCES.txt' 2026-10-03T13:28:04,066 creating build/lib/osteosarc/data 2026-10-03T13:28:04,067 copying osteosarc/data/evidence-overlaps.json -> build/lib/osteosarc/data 2026-10-03T13:28:04,070 copying osteosarc/data/panels.json -> build/lib/osteosarc/data 2026-10-03T13:28:04,074 copying osteosarc/data/allele_resolutions.json -> build/lib/osteosarc/data 2026-10-03T13:28:04,077 copying osteosarc/data/retrieval-cases.json -> build/lib/osteosarc/data 2026-10-03T13:28:04,082 copying osteosarc/data/sv_candidates.json -> build/lib/osteosarc/data 2026-10-03T13:28:04,231 creating build/lib/osteosarc/data/bundles 2026-10-03T13:28:04,232 copying osteosarc/data/bundles/openvax-v2.spec.json -> build/lib/osteosarc/data/bundles 2026-10-03T13:28:04,235 copying osteosarc/data/bundles/openvax-v2.release.json -> build/lib/osteosarc/data/bundles 2026-10-03T13:28:04,237 copying osteosarc/data/bundles/openvax-v1.spec.json -> build/lib/osteosarc/data/bundles 2026-10-03T13:28:04,240 copying osteosarc/data/bundles/openvax-v1.release.json -> build/lib/osteosarc/data/bundles 2026-10-03T13:28:04,256 installing to build/bdist.linux-armv7l/wheel 2026-10-03T13:28:04,256 running install 2026-10-03T13:28:04,278 running install_lib 2026-10-03T13:28:04,284 creating build/bdist.linux-armv7l/wheel 2026-10-03T13:28:04,286 creating build/bdist.linux-armv7l/wheel/osteosarc 2026-10-03T13:28:04,288 copying build/lib/osteosarc/shared.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,291 copying build/lib/osteosarc/dataset.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,294 copying build/lib/osteosarc/views.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,297 copying build/lib/osteosarc/timeline.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,299 copying build/lib/osteosarc/urls.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,301 copying build/lib/osteosarc/parsing.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,303 copying build/lib/osteosarc/cli.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,306 copying build/lib/osteosarc/fixtures.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,309 copying build/lib/osteosarc/reads.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,311 copying build/lib/osteosarc/read_receipts.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,313 copying build/lib/osteosarc/bundles.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,316 copying build/lib/osteosarc/saved.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,318 copying build/lib/osteosarc/sv_candidates.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,320 copying build/lib/osteosarc/alleles.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,323 copying build/lib/osteosarc/catalog.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,325 copying build/lib/osteosarc/retrieval.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,327 copying build/lib/osteosarc/__main__.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,329 copying build/lib/osteosarc/__init__.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,331 copying build/lib/osteosarc/cache.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,333 copying build/lib/osteosarc/errors.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,335 copying build/lib/osteosarc/records.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,337 copying build/lib/osteosarc/fixture_assets.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,339 copying build/lib/osteosarc/cohort_bundle.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,342 copying build/lib/osteosarc/corpus.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,344 copying build/lib/osteosarc/recovery.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,347 copying build/lib/osteosarc/reference.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,349 creating build/bdist.linux-armv7l/wheel/osteosarc/data 2026-10-03T13:28:04,350 copying build/lib/osteosarc/data/evidence-overlaps.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data 2026-10-03T13:28:04,353 copying build/lib/osteosarc/data/panels.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data 2026-10-03T13:28:04,356 copying build/lib/osteosarc/data/allele_resolutions.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data 2026-10-03T13:28:04,359 copying build/lib/osteosarc/data/retrieval-cases.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data 2026-10-03T13:28:04,364 creating build/bdist.linux-armv7l/wheel/osteosarc/data/bundles 2026-10-03T13:28:04,365 copying build/lib/osteosarc/data/bundles/openvax-v2.spec.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data/bundles 2026-10-03T13:28:04,367 copying build/lib/osteosarc/data/bundles/openvax-v2.release.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data/bundles 2026-10-03T13:28:04,369 copying build/lib/osteosarc/data/bundles/openvax-v1.spec.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data/bundles 2026-10-03T13:28:04,372 copying build/lib/osteosarc/data/bundles/openvax-v1.release.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data/bundles 2026-10-03T13:28:04,373 copying build/lib/osteosarc/data/sv_candidates.json -> build/bdist.linux-armv7l/wheel/./osteosarc/data 2026-10-03T13:28:04,506 copying build/lib/osteosarc/display.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,507 copying build/lib/osteosarc/curation.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,511 copying build/lib/osteosarc/models.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,514 copying build/lib/osteosarc/provenance.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,517 copying build/lib/osteosarc/discovery.py -> build/bdist.linux-armv7l/wheel/./osteosarc 2026-10-03T13:28:04,519 running install_egg_info 2026-10-03T13:28:04,524 Copying osteosarc.egg-info to build/bdist.linux-armv7l/wheel/./osteosarc-0.15.4-py3.11.egg-info 2026-10-03T13:28:04,537 running install_scripts 2026-10-03T13:28:04,549 creating build/bdist.linux-armv7l/wheel/osteosarc-0.15.4.dist-info/WHEEL 2026-10-03T13:28:04,552 creating '/tmp/pip-wheel-p20r1_x_/.tmp-k1ar38id/osteosarc-0.15.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-10-03T13:28:04,555 adding 'osteosarc/__init__.py' 2026-10-03T13:28:04,556 adding 'osteosarc/__main__.py' 2026-10-03T13:28:04,558 adding 'osteosarc/alleles.py' 2026-10-03T13:28:04,562 adding 'osteosarc/bundles.py' 2026-10-03T13:28:04,565 adding 'osteosarc/cache.py' 2026-10-03T13:28:04,568 adding 'osteosarc/catalog.py' 2026-10-03T13:28:04,573 adding 'osteosarc/cli.py' 2026-10-03T13:28:04,576 adding 'osteosarc/cohort_bundle.py' 2026-10-03T13:28:04,578 adding 'osteosarc/corpus.py' 2026-10-03T13:28:04,585 adding 'osteosarc/curation.py' 2026-10-03T13:28:04,592 adding 'osteosarc/dataset.py' 2026-10-03T13:28:04,593 adding 'osteosarc/discovery.py' 2026-10-03T13:28:04,595 adding 'osteosarc/display.py' 2026-10-03T13:28:04,596 adding 'osteosarc/errors.py' 2026-10-03T13:28:04,598 adding 'osteosarc/fixture_assets.py' 2026-10-03T13:28:04,600 adding 'osteosarc/fixtures.py' 2026-10-03T13:28:04,603 adding 'osteosarc/models.py' 2026-10-03T13:28:04,606 adding 'osteosarc/parsing.py' 2026-10-03T13:28:04,607 adding 'osteosarc/provenance.py' 2026-10-03T13:28:04,609 adding 'osteosarc/read_receipts.py' 2026-10-03T13:28:04,613 adding 'osteosarc/reads.py' 2026-10-03T13:28:04,615 adding 'osteosarc/records.py' 2026-10-03T13:28:04,618 adding 'osteosarc/recovery.py' 2026-10-03T13:28:04,620 adding 'osteosarc/reference.py' 2026-10-03T13:28:04,621 adding 'osteosarc/retrieval.py' 2026-10-03T13:28:04,623 adding 'osteosarc/saved.py' 2026-10-03T13:28:04,633 adding 'osteosarc/shared.py' 2026-10-03T13:28:04,634 adding 'osteosarc/sv_candidates.py' 2026-10-03T13:28:04,638 adding 'osteosarc/timeline.py' 2026-10-03T13:28:04,639 adding 'osteosarc/urls.py' 2026-10-03T13:28:04,643 adding 'osteosarc/views.py' 2026-10-03T13:28:04,646 adding 'osteosarc/data/allele_resolutions.json' 2026-10-03T13:28:04,647 adding 'osteosarc/data/evidence-overlaps.json' 2026-10-03T13:28:04,651 adding 'osteosarc/data/panels.json' 2026-10-03T13:28:04,661 adding 'osteosarc/data/retrieval-cases.json' 2026-10-03T13:28:04,996 adding 'osteosarc/data/sv_candidates.json' 2026-10-03T13:28:05,053 adding 'osteosarc/data/bundles/openvax-v1.release.json' 2026-10-03T13:28:05,055 adding 'osteosarc/data/bundles/openvax-v1.spec.json' 2026-10-03T13:28:05,056 adding 'osteosarc/data/bundles/openvax-v2.release.json' 2026-10-03T13:28:05,058 adding 'osteosarc/data/bundles/openvax-v2.spec.json' 2026-10-03T13:28:05,061 adding 'osteosarc-0.15.4.dist-info/licenses/LICENSE' 2026-10-03T13:28:05,063 adding 'osteosarc-0.15.4.dist-info/METADATA' 2026-10-03T13:28:05,064 adding 'osteosarc-0.15.4.dist-info/WHEEL' 2026-10-03T13:28:05,065 adding 'osteosarc-0.15.4.dist-info/entry_points.txt' 2026-10-03T13:28:05,065 adding 'osteosarc-0.15.4.dist-info/top_level.txt' 2026-10-03T13:28:05,066 adding 'osteosarc-0.15.4.dist-info/RECORD' 2026-10-03T13:28:05,127 removing build/bdist.linux-armv7l/wheel 2026-10-03T13:28:05,240 Building wheel for osteosarc (pyproject.toml): finished with status 'done' 2026-10-03T13:28:05,255 Created wheel for osteosarc: filename=osteosarc-0.15.4-py3-none-any.whl size=617489 sha256=97ef8425c473748f352b40bb80e20c0b0ad93a49193f4ed2dac79815227f606d 2026-10-03T13:28:05,257 Stored in directory: /tmp/pip-ephem-wheel-cache-oy82ding/wheels/cd/5b/35/cbf16b5d47e5f73b164426a35cd3dbcb8445fa8cc22462ae2f 2026-10-03T13:28:05,269 Successfully built osteosarc 2026-10-03T13:28:05,290 Removed build tracker: '/tmp/pip-build-tracker-n7wo_8nk'