2026-10-12T19:02:40,682 Created temporary directory: /tmp/pip-ephem-wheel-cache-o4d25op1
2026-10-12T19:02:40,684 Created temporary directory: /tmp/pip-build-tracker-ri_9i1p9
2026-10-12T19:02:40,684 Initialized build tracking at /tmp/pip-build-tracker-ri_9i1p9
2026-10-12T19:02:40,685 Created build tracker: /tmp/pip-build-tracker-ri_9i1p9
2026-10-12T19:02:40,685 Entered build tracker: /tmp/pip-build-tracker-ri_9i1p9
2026-10-12T19:02:40,686 Created temporary directory: /tmp/pip-wheel-q1n0bcar
2026-10-12T19:02:40,689 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-12T19:02:40,691 Created temporary directory: /tmp/pip-ephem-wheel-cache-kdxco3zo
2026-10-12T19:02:40,712 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-12T19:02:40,716 2 location(s) to search for versions of isovar:
2026-10-12T19:02:40,716 * https://pypi.org/simple/isovar/
2026-10-12T19:02:40,716 * https://www.piwheels.org/simple/isovar/
2026-10-12T19:02:40,717 Fetching project page and analyzing links: https://pypi.org/simple/isovar/
2026-10-12T19:02:40,717 Getting page https://pypi.org/simple/isovar/
2026-10-12T19:02:40,719 Found index url https://pypi.org/simple
2026-10-12T19:02:40,926 Fetched page https://pypi.org/simple/isovar/ as application/vnd.pypi.simple.v1+json
2026-10-12T19:02:40,985   Found link https://files.pythonhosted.org/packages/b6/80/350ac9b97f7c872d7f2422a11bdb228a0286661fe2983884724735bff630/isovar-0.0.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.0.5
2026-10-12T19:02:40,986   Found link https://files.pythonhosted.org/packages/09/7c/e80ccfcab66948d3c69dd70159439be76843cfcc08421a7b0e50248a6c34/isovar-0.0.6.tar.gz (from https://pypi.org/simple/isovar/), version: 0.0.6
2026-10-12T19:02:40,986   Found link https://files.pythonhosted.org/packages/ac/c8/a208dbd44c8e1010147b662a62fc5cb4114024eebb5a47dd9da1beca8aa8/isovar-0.1.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.0
2026-10-12T19:02:40,987   Found link https://files.pythonhosted.org/packages/f8/2c/7217a7fe510804c536a379cf7e66cf92fb056bb5d9a552de1d4774d6fe12/isovar-0.1.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.3
2026-10-12T19:02:40,988   Found link https://files.pythonhosted.org/packages/1d/1f/d51e079dd9a1d9c572405e64b25feffdcdeefac96786451d4caa1bab671e/isovar-0.1.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.5
2026-10-12T19:02:40,989   Found link https://files.pythonhosted.org/packages/ff/ae/5df86c7a7f4449949dfc43961e50ac47963582c303b40659a1762feb14c2/isovar-0.2.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.0
2026-10-12T19:02:40,990   Found link https://files.pythonhosted.org/packages/ab/e1/110b3dab08491c53f28a69c65c9effd112c0ae4a9412a6ff3328655dee91/isovar-0.2.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.1
2026-10-12T19:02:40,991   Found link https://files.pythonhosted.org/packages/03/ac/1627b0180ffd2aff813066e0f455d65c49d13e1774e944dfc29726c247b0/isovar-0.2.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.2
2026-10-12T19:02:40,991   Found link https://files.pythonhosted.org/packages/72/bf/82e36d137b0866be27e0a27c1545fa4fb0b519e1aac31734b239fff5bff9/isovar-0.2.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.3
2026-10-12T19:02:40,992   Found link https://files.pythonhosted.org/packages/ef/24/21c68468b0b1130123aadc8451be794806adf0ebc7a63f8eb0e0ad30fca3/isovar-0.2.4.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.4
2026-10-12T19:02:40,993   Found link https://files.pythonhosted.org/packages/d7/d7/b4749eb20a87bd034eae20ee564eb8d69a109a3c74ddfd0044a4ad9e4d0a/isovar-0.4.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.4.0
2026-10-12T19:02:40,994   Found link https://files.pythonhosted.org/packages/1e/5a/5dc4f54bb9d10f3bd3755b5e87bfd51b33f5c538b69af6d807509698a297/isovar-0.5.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.5.0
2026-10-12T19:02:40,995   Found link https://files.pythonhosted.org/packages/c9/a1/c06698d8df3d589ba44819394d4c78273c81d6472135fe96ce73b01f33b3/isovar-0.5.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.5.2
2026-10-12T19:02:40,996   Found link https://files.pythonhosted.org/packages/19/c9/6e8f71fb30ac619216f5ccbf0a444ba2cf19fc0e9955c5d1ef8984e01264/isovar-0.6.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.6.0
2026-10-12T19:02:40,996   Found link https://files.pythonhosted.org/packages/a2/c7/c98501932e9bf937a69d9f13cd3cdc91b92936520f2f27d3c3961bf14c2f/isovar-0.6.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.6.1
2026-10-12T19:02:40,997   Found link https://files.pythonhosted.org/packages/b3/6e/66e364fe1888d0a1c57e34142d1a10c17c2a74fec1d2ac2229c7f8405ec3/isovar-0.7.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.0
2026-10-12T19:02:40,997   Found link https://files.pythonhosted.org/packages/27/84/9251647726f83d32a9af94b54e9faacd046b9ecca0cd415f436acde977b9/isovar-0.7.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.1
2026-10-12T19:02:40,998   Found link https://files.pythonhosted.org/packages/b0/1c/c0f91c7c46aac659e075d34e0d55a05c5dbfd38727a4ee39911f6bf7d1e6/isovar-0.7.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.2
2026-10-12T19:02:40,998   Found link https://files.pythonhosted.org/packages/0e/f2/dc74cc8ce342d8ea408452ebda0ad498f1879c28e2d01b42f96e8ea7cba1/isovar-0.7.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.3
2026-10-12T19:02:40,999   Found link https://files.pythonhosted.org/packages/0d/3c/f7108c0b1aba27d58b30075287874b88b194cc34ba8938a89cfdc40fbc19/isovar-0.7.4.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.4
2026-10-12T19:02:41,000   Found link https://files.pythonhosted.org/packages/71/d3/bae7fe9f6548b2a6f7824dd3eca34fab47971070b8a5559f1c8ba80f263a/isovar-0.7.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.5
2026-10-12T19:02:41,000   Found link https://files.pythonhosted.org/packages/76/78/807f6ebeb5f5ecb974093a18e62e7cb70695d55289448df65495be290052/isovar-0.8.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.0
2026-10-12T19:02:41,001   Found link https://files.pythonhosted.org/packages/8d/8d/231aa93b4e2668cb701253e8b3b62c0a8cf0d76d5570ebd80999ee1d1240/isovar-0.8.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.1
2026-10-12T19:02:41,002   Found link https://files.pythonhosted.org/packages/37/33/79dad79cecfc192bdbd65593c0ebf693ab7ca44aeba59f6fcda3e2933f21/isovar-0.8.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.2
2026-10-12T19:02:41,003   Found link https://files.pythonhosted.org/packages/8c/ab/99e3ac9a148d0acd27abf5e6d640eba635cdfdeacd876bee1bf27c0bf05f/isovar-0.8.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.3
2026-10-12T19:02:41,003   Found link https://files.pythonhosted.org/packages/da/ed/1f4d8fed9c2cc26b80124726bd7dd40d4f5b7e5b8afdadb8a62077bd58a1/isovar-0.8.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.5
2026-10-12T19:02:41,004   Found link https://files.pythonhosted.org/packages/54/91/402d3e534b4b063e6fbba41ae872627ed3e67b0ad1246f9721eb652f2237/isovar-0.9.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.9.0
2026-10-12T19:02:41,005   Found link https://files.pythonhosted.org/packages/d4/ac/f45056b97d888ecc95ce3694d270a08c9610eb45823c0ca6a907a156d7f5/isovar-1.0.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.0
2026-10-12T19:02:41,005   Found link https://files.pythonhosted.org/packages/92/cd/3ee3c6155d5471cdb712ccc2c59e19ebfc896ace3adbb322d26bd45dace9/isovar-1.0.1.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.1
2026-10-12T19:02:41,006   Found link https://files.pythonhosted.org/packages/77/2f/222f0d24e0baf292e4b87a9a0b1d0313668d649bbbbe3be1ede886a8e5eb/isovar-1.0.2.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.2
2026-10-12T19:02:41,007   Found link https://files.pythonhosted.org/packages/28/32/2279cf21d9d31608c4169a18e26aefd82ff9ab6d8df8df54f860f31b0601/isovar-1.0.3.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.3
2026-10-12T19:02:41,008   Found link https://files.pythonhosted.org/packages/f5/cc/8d7a6eeebae8cf6d31df23bcf5dcb5f14aad7fd4ef12790393e16426da12/isovar-1.0.4.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.4
2026-10-12T19:02:41,009   Found link https://files.pythonhosted.org/packages/e2/e3/470ea2f19176ace9ea4b19d855e025456aa529748e30c1a66e3ad1874559/isovar-1.0.5.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.5
2026-10-12T19:02:41,009   Found link https://files.pythonhosted.org/packages/0f/9f/358c17b6d0527e0b1ceb056d1b8fbb2bf0307d5181f32d4e72089bdce605/isovar-1.0.6.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.6
2026-10-12T19:02:41,010   Found link https://files.pythonhosted.org/packages/66/c1/95a0e55994915b6cbbf4bccbcafeb88b9db4838d7b934341bb97ff97b2e7/isovar-1.0.7.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.7
2026-10-12T19:02:41,011   Found link https://files.pythonhosted.org/packages/80/db/7d4cdb69c95e6a6abbfabdff6145ad18a80125d4fb72ae90510c9547712c/isovar-1.0.8.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.8
2026-10-12T19:02:41,011   Found link https://files.pythonhosted.org/packages/72/8b/5c6413f8bdede23be5e966366bb79d158d4b2ccb6465f9718f86cdb17c1b/isovar-1.0.9.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.9
2026-10-12T19:02:41,012   Found link https://files.pythonhosted.org/packages/77/93/1198731f9a82344e62c506aae7498e62ee7d66b47d9a41044449775d981a/isovar-1.0.10.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.10
2026-10-12T19:02:41,012   Found link https://files.pythonhosted.org/packages/c8/c4/bbc73d818113ef77f38866db48fef6fd04c82cdb90ec1a92415e98a7da3f/isovar-1.1.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.1.0
2026-10-12T19:02:41,013   Found link https://files.pythonhosted.org/packages/b5/1e/138d88128449d2753f828c169a45688e5d1c5b011544a83cdfa2e64af97a/isovar-1.1.1.tar.gz (from https://pypi.org/simple/isovar/), version: 1.1.1
2026-10-12T19:02:41,014   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/e5/35/3e24c2e9c31374a7d9a283598cdc15cc85082d1b59206016a8a2c09efc7c/isovar-1.3.0-py3-none-any.whl (from https://pypi.org/simple/isovar/)
2026-10-12T19:02:41,015   Found link https://files.pythonhosted.org/packages/83/be/38d44747eb1c3825a566651a8da85f85584069f1894eb7799fd2bf61a1ec/isovar-1.3.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.3.0
2026-10-12T19:02:41,016   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/2b/2e/3fbc2ce1f15635ff2d0d88fd6f730c15db30b31059de43ec8eed64fa36f9/isovar-1.4.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,017   Found link https://files.pythonhosted.org/packages/3f/f1/f4adc10fc650b60cc01f1d3101df6edde5169ec141a72dd60f32cc7eb938/isovar-1.4.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.0
2026-10-12T19:02:41,018   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f9/85/b300ad76c791ce7d5eb06accf9a7d9f24f634637d7fc5e441b0cf1f96afa/isovar-1.4.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,019   Found link https://files.pythonhosted.org/packages/60/2f/928cba23685bc68c9ffeec0d44ff96995984000d9a6def21318812d19f23/isovar-1.4.1.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.1
2026-10-12T19:02:41,019   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/17/86/3361736a384ab2247ca528a2348fabfeabaa6c4463ecf28c0d3a40de71be/isovar-1.4.2-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,020   Found link https://files.pythonhosted.org/packages/a2/f6/8fbda26c9a1f2f41f20d8db7e728fb8801a92a1117c4178b8e3017d08918/isovar-1.4.2.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.2
2026-10-12T19:02:41,021   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f2/fc/d3646435e77cfa4eef0be724a31fd83e79437990d83df475429aeab0564e/isovar-1.4.3-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,022   Found link https://files.pythonhosted.org/packages/19/ce/279e8f08372e8849172e3ec87fc089c70bf0431f154d997280a266077dc2/isovar-1.4.3.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.3
2026-10-12T19:02:41,023   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/ab/4e/bc718e6a78e78637176157a6b6e5617016d09f2db80600dc2e5b2afe53bc/isovar-1.4.4-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,024   Found link https://files.pythonhosted.org/packages/f7/26/95f0b4d23a436de0e1a3cb061cdad8ad22a704c069c88f5ae0ce6ccd4bcb/isovar-1.4.4.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.4
2026-10-12T19:02:41,024   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f7/80/81c1c5df1febf045c98a1547851fdb3a0b3b92b579eeff83839a144dbe68/isovar-1.4.5-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,025   Found link https://files.pythonhosted.org/packages/44/1c/4dec1a588428119d26b2667a92cb41bcf2803a001229fda11970040fa20f/isovar-1.4.5.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.5
2026-10-12T19:02:41,026   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/66/65/a5b102914f586ff695750dbb827ef94e0176bddce2cd571700c9bec8b139/isovar-1.4.6-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,027   Found link https://files.pythonhosted.org/packages/fa/59/482a12362246dbf244ac190cd2768aaebc6e07ba8a237504cbca589841b9/isovar-1.4.6.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.6
2026-10-12T19:02:41,028   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/ba/b5/c1bd18b5366c10004e211bc4808da830682c0733eb74b405c07ceaa96d37/isovar-1.4.7-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,029   Found link https://files.pythonhosted.org/packages/0a/9e/6f427722575d49f3e339e3fb76ca11d831dcfb611a166dd0335215adc89c/isovar-1.4.7.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.7
2026-10-12T19:02:41,029   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/a0/b4/65ebf7d449bc8e9afb7821ce35e9afe72c003def3302998be1b4c7c01a9e/isovar-1.4.8-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,030   Found link https://files.pythonhosted.org/packages/a2/d4/f093bdaaa02d2e8fc4ea86420464b5494319999a5b5caa22f7ee3b4092b9/isovar-1.4.8.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.8
2026-10-12T19:02:41,031   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/cf/2e/80194c271082f9c50740fb62ea97761af06938b29b1286df20120503d2ad/isovar-1.4.9-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,032   Found link https://files.pythonhosted.org/packages/7a/1b/bfeac801a9180b1cf0de776783e0463b266694bdb0827e9232392f7b94f1/isovar-1.4.9.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.9
2026-10-12T19:02:41,033   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/96/12/94b6a4eb8baaa753e37fd657b62d817da629f0e53e3685d5c6ccac20637e/isovar-1.4.10-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,034   Found link https://files.pythonhosted.org/packages/64/31/cee9d8c349e124cb70e40d539c8569e33bb464e43f36b123664b17c32901/isovar-1.4.10.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.10
2026-10-12T19:02:41,035   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/18/6a/a69049c5f32b88f9db17df55df567a1e5ce755a06b4cb619acb5dfc07ff7/isovar-1.4.11-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,036   Found link https://files.pythonhosted.org/packages/28/de/3373a7a004353691b970c0540e0533f6981a5d6b4b9d9a2895535c370634/isovar-1.4.11.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.11
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2026-10-12T19:02:41,249   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/6e/a1/85e8cc6b7a6684de544af4b3e6f9c1736cb38fdc1286a45d2a11483ed58b/isovar-1.46.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,250   Found link https://files.pythonhosted.org/packages/73/f0/5c1cd7dc54c7a224a8ff5b370a1f520f93e69b83d570fedd35959e2904b6/isovar-1.46.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.46.0
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2026-10-12T19:02:41,254   Found link https://files.pythonhosted.org/packages/9e/c5/651909fee6a572811b391f63cfed5083ba4a3e122e2f779beeb49839740d/isovar-1.47.1.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.47.1
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2026-10-12T19:02:41,255   Found link https://files.pythonhosted.org/packages/6b/2d/c9bd039ffd485b2fb8cb69d47628232f2c477b4a4ec1670c07a34866f3f0/isovar-1.48.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.48.0
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2026-10-12T19:02:41,257   Found link https://files.pythonhosted.org/packages/90/94/81eb37716da675bf3720401b6c1f6180bf40147fbe76a25da0b67ffbabc3/isovar-1.49.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.49.0
2026-10-12T19:02:41,257   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/35/2c/d8bcff5993f575c48a5b16a6c2874699dc6649b8d8f756490cdd85257f34/isovar-1.50.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,258   Found link https://files.pythonhosted.org/packages/fb/00/d6ad0b64710dc58def32981eab9bfffc570fb63171f399f0ddc1cdf711ec/isovar-1.50.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.50.0
2026-10-12T19:02:41,259   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/90/c4/d3005b97cafeb681b4d232ac6e1f711dbf491269e4da97b4023b0ab3b235/isovar-1.51.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,260   Found link https://files.pythonhosted.org/packages/e9/8c/7ae81d75dfbe4aa48f88759e2a76975f31fc544c70b5b96af7ea5280cc54/isovar-1.51.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.51.0
2026-10-12T19:02:41,261   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/26/ea/054555c11771fb35d0ab68444ddc122560bdb442b9a1af053ac0b4e4dde6/isovar-1.52.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-12T19:02:41,262   Found link https://files.pythonhosted.org/packages/e1/fb/79cbedecbd22ecccd679b19e82a0929e7babbe18dc5c7e866a08024935ba/isovar-1.52.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.52.0
2026-10-12T19:02:41,263 Fetching project page and analyzing links: https://www.piwheels.org/simple/isovar/
2026-10-12T19:02:41,263 Getting page https://www.piwheels.org/simple/isovar/
2026-10-12T19:02:41,265 Found index url https://www.piwheels.org/simple
2026-10-12T19:02:41,467 Fetched page https://www.piwheels.org/simple/isovar/ as text/html
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2026-10-12T19:02:41,611   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-1.0.3-py3-none-any.whl#sha256=1924036387250bb53e977f404f6714b8029203ad446e3b406f61f0204a871a52 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,611   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-1.0.2-py3-none-any.whl#sha256=f27cd24f73c66dbf4e50ca64a8f03e06bb05f57c83f5b217384904046e95513b (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,612   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-1.0.1-py3-none-any.whl#sha256=d630798a7f0932d5d7a6b42821c22d61f87eb42258b08ced386501e90b72f9da (from https://www.piwheels.org/simple/isovar/)
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2026-10-12T19:02:41,613   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.9.0-py3-none-any.whl#sha256=93e6c5d78217229ba1fc17fcdba4933e7288a0b5fac47499530543be8d926114 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,613   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.8.5-py3-none-any.whl#sha256=3e040cc19ffb8f5b6563713d12135d20ff3f72aefbc3f682defced21cd6490f1 (from https://www.piwheels.org/simple/isovar/)
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2026-10-12T19:02:41,615   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.8.1-py3-none-any.whl#sha256=e1bab4c9464129e5f8a6abf5ba56a2229a934755380f6fac3a60dd2ee9bbf7b8 (from https://www.piwheels.org/simple/isovar/)
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2026-10-12T19:02:41,616   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.5-py3-none-any.whl#sha256=f3665219b1bcaa25b4988a796975a18d4ab15a5549f38c55444f8d426eb51978 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,617   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.4-py3-none-any.whl#sha256=a28a28dbc4bc797ba85dddf7fc3f5629eadef4e10779400418df5559ea25d31f (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,617   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.3-py3-none-any.whl#sha256=19bb9ea17e75b529ec6d27a10e85691e0e89225c5f47f82656c4e75414504bb3 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,618   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.2-py3-none-any.whl#sha256=05fdf6bedb1e653eb76f280196726c2bf133a786d271509ee2ea3453d8df0c58 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,618   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.1-py3-none-any.whl#sha256=5819207be82c49b17547f234ec6076992f9af4bcea048c6b6078165116e97e68 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,619   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.0-py3-none-any.whl#sha256=7bc474c6a53e930506940e34737ec9f85116cb86eed696db0ea545b5687c112a (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,620   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.6.1-py3-none-any.whl#sha256=a67ea479f0c73cc43fde0d35c8801f6ed3c81f062476dbaf39b5c410c0ba4b7d (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,620   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.6.0-py3-none-any.whl#sha256=37e7cace0e90e2ad432e97fbb4eea705b840edb66fd89ac70f50baf1f7f5d24b (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,621   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.5.2-py3-none-any.whl#sha256=c3a0efab34c6879d8e0c15b80481b591c5ea319601fee4147e28a109ca338c1e (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,621   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.5.0-py3-none-any.whl#sha256=83ba7764960fac3b11d56deee3d616800d6833d1c57f7418d852a04e4f0e93e7 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,622   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.4.0-py3-none-any.whl#sha256=9cfc7274f39f4f218d25eaaaa6ba235cf6a7b457dcc3997ca42322a8fe84bf17 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,622   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.4-py3-none-any.whl#sha256=f55b72c484b8bee6bccbb03dd42ba7ab433b3fa89a5c4c5b575b3b26b870e4f0 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,623   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.3-py3-none-any.whl#sha256=f12eae279834045a239b4762d1849c44173b29617a7858de5ead71a13d1f39cc (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,623   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.2-py3-none-any.whl#sha256=9b8ea377bb2e317603890ef935ddaca811af4337780d82fc56c33517a277182b (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,624   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.1-py3-none-any.whl#sha256=a027a8f2bb06d45c573a79bfec0ed8dce083f9120aec3e91482dc74401039e46 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,625   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.0-py3-none-any.whl#sha256=ab7b0e6349d9a2c4802489d7cc7a867b23e3c2972f66283839629ac8f858cbce (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,625   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.5-py3-none-any.whl#sha256=ba9438ba3b8c2a1e59345d0c9fbfb207ded65feaf93b8d4dbf0972c7de89035c (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,626   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.3-py3-none-any.whl#sha256=c266801b0b080abcaf155870dfcd593ca904b27565767a27067326c819f0b15c (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,627   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.0-py3-none-any.whl#sha256=272454342ccc3da1af19007ad496e6d33165a4482470cef97f1e1bd4a898aee8 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,627   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.6-py3-none-any.whl#sha256=04d869c163e51c11ed2d2bb125bffaf7e0c89cb17d906bcbc52914d1fa888e72 (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,628   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.5-py3-none-any.whl#sha256=57d3b95575aae8439f0aaa54ce12c1cb00b1bcb2e4fec582550cb0484903bcbc (from https://www.piwheels.org/simple/isovar/)
2026-10-12T19:02:41,629 Skipping link: not a file: https://www.piwheels.org/simple/isovar/
2026-10-12T19:02:41,629 Skipping link: not a file: https://pypi.org/simple/isovar/
2026-10-12T19:02:41,674 Given no hashes to check 1 links for project 'isovar': discarding no candidates
2026-10-12T19:02:41,693 Collecting isovar==1.47.1
2026-10-12T19:02:41,695   Created temporary directory: /tmp/pip-unpack-t6u16ycm
2026-10-12T19:02:41,933   Downloading isovar-1.47.1.tar.gz (12.6 MB)
2026-10-12T19:02:46,275   Added isovar==1.47.1 from https://files.pythonhosted.org/packages/9e/c5/651909fee6a572811b391f63cfed5083ba4a3e122e2f779beeb49839740d/isovar-1.47.1.tar.gz to build tracker '/tmp/pip-build-tracker-ri_9i1p9'
2026-10-12T19:02:46,280   Created temporary directory: /tmp/pip-build-env-5xi_yje7
2026-10-12T19:02:46,285   Installing build dependencies: started
2026-10-12T19:02:46,286   Running command pip subprocess to install build dependencies
2026-10-12T19:02:47,458   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-10-12T19:02:47,912   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-12T19:02:47,935   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-12T19:02:49,714   Collecting setuptools>=77
2026-10-12T19:02:49,715     Obtaining dependency information for setuptools>=77 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata
2026-10-12T19:02:49,729     Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-10-12T19:02:49,975   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-12T19:02:50,077   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-12T19:02:52,825   Installing collected packages: setuptools
2026-10-12T19:02:55,138   Successfully installed setuptools-84.0.0
2026-10-12T19:02:55,408   Installing build dependencies: finished with status 'done'
2026-10-12T19:02:55,415   Getting requirements to build wheel: started
2026-10-12T19:02:55,416   Running command Getting requirements to build wheel
2026-10-12T19:02:56,128   running egg_info
2026-10-12T19:02:56,134   writing isovar.egg-info/PKG-INFO
2026-10-12T19:02:56,139   writing dependency_links to isovar.egg-info/dependency_links.txt
2026-10-12T19:02:56,142   writing entry points to isovar.egg-info/entry_points.txt
2026-10-12T19:02:56,145   writing requirements to isovar.egg-info/requires.txt
2026-10-12T19:02:56,146   writing top-level names to isovar.egg-info/top_level.txt
2026-10-12T19:02:56,193   reading manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:56,216   reading manifest template 'MANIFEST.in'
2026-10-12T19:02:56,274   adding license file 'LICENSE'
2026-10-12T19:02:56,294   writing manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:56,394   Getting requirements to build wheel: finished with status 'done'
2026-10-12T19:02:56,397   Created temporary directory: /tmp/pip-modern-metadata-frqayqra
2026-10-12T19:02:56,400   Preparing metadata (pyproject.toml): started
2026-10-12T19:02:56,401   Running command Preparing metadata (pyproject.toml)
2026-10-12T19:02:57,080   running dist_info
2026-10-12T19:02:57,090   creating /tmp/pip-modern-metadata-frqayqra/isovar.egg-info
2026-10-12T19:02:57,091   writing /tmp/pip-modern-metadata-frqayqra/isovar.egg-info/PKG-INFO
2026-10-12T19:02:57,097   writing dependency_links to /tmp/pip-modern-metadata-frqayqra/isovar.egg-info/dependency_links.txt
2026-10-12T19:02:57,099   writing entry points to /tmp/pip-modern-metadata-frqayqra/isovar.egg-info/entry_points.txt
2026-10-12T19:02:57,102   writing requirements to /tmp/pip-modern-metadata-frqayqra/isovar.egg-info/requires.txt
2026-10-12T19:02:57,103   writing top-level names to /tmp/pip-modern-metadata-frqayqra/isovar.egg-info/top_level.txt
2026-10-12T19:02:57,104   writing manifest file '/tmp/pip-modern-metadata-frqayqra/isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:57,147   reading manifest file '/tmp/pip-modern-metadata-frqayqra/isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:57,149   reading manifest template 'MANIFEST.in'
2026-10-12T19:02:57,201   adding license file 'LICENSE'
2026-10-12T19:02:57,216   writing manifest file '/tmp/pip-modern-metadata-frqayqra/isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:57,217   creating '/tmp/pip-modern-metadata-frqayqra/isovar-1.47.1.dist-info'
2026-10-12T19:02:57,343   Preparing metadata (pyproject.toml): finished with status 'done'
2026-10-12T19:02:57,349   Source in /tmp/pip-wheel-q1n0bcar/isovar_f8d797b0f2a648238ed83f4d2bdae341 has version 1.47.1, which satisfies requirement isovar==1.47.1 from https://files.pythonhosted.org/packages/9e/c5/651909fee6a572811b391f63cfed5083ba4a3e122e2f779beeb49839740d/isovar-1.47.1.tar.gz
2026-10-12T19:02:57,350   Removed isovar==1.47.1 from https://files.pythonhosted.org/packages/9e/c5/651909fee6a572811b391f63cfed5083ba4a3e122e2f779beeb49839740d/isovar-1.47.1.tar.gz from build tracker '/tmp/pip-build-tracker-ri_9i1p9'
2026-10-12T19:02:57,359 Created temporary directory: /tmp/pip-unpack-gjuecdi3
2026-10-12T19:02:57,359 Building wheels for collected packages: isovar
2026-10-12T19:02:57,363   Created temporary directory: /tmp/pip-wheel-46czmtwb
2026-10-12T19:02:57,364   Destination directory: /tmp/pip-wheel-46czmtwb
2026-10-12T19:02:57,366   Building wheel for isovar (pyproject.toml): started
2026-10-12T19:02:57,367   Running command Building wheel for isovar (pyproject.toml)
2026-10-12T19:02:58,008   running bdist_wheel
2026-10-12T19:02:58,026   running build
2026-10-12T19:02:58,027   running build_py
2026-10-12T19:02:58,034   creating build/lib/isovar
2026-10-12T19:02:58,037   copying isovar/read_phasing.py -> build/lib/isovar
2026-10-12T19:02:58,039   copying isovar/__init__.py -> build/lib/isovar
2026-10-12T19:02:58,041   copying isovar/visualization.py -> build/lib/isovar
2026-10-12T19:02:58,045   copying isovar/protein_comparison.py -> build/lib/isovar
2026-10-12T19:02:58,048   copying isovar/reference_context_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,051   copying isovar/variant_orf_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,053   copying isovar/sv_rna_orfs.py -> build/lib/isovar
2026-10-12T19:02:58,057   copying isovar/transcript_compatibility.py -> build/lib/isovar
2026-10-12T19:02:58,059   copying isovar/isovar_result_provider.py -> build/lib/isovar
2026-10-12T19:02:58,061   copying isovar/read_end_inference.py -> build/lib/isovar
2026-10-12T19:02:58,065   copying isovar/chimeric_alignment.py -> build/lib/isovar
2026-10-12T19:02:58,068   copying isovar/variant_sequence_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,070   copying isovar/read_lineage.py -> build/lib/isovar
2026-10-12T19:02:58,073   copying isovar/allele_read.py -> build/lib/isovar
2026-10-12T19:02:58,075   copying isovar/translation_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,077   copying isovar/effect_prediction.py -> build/lib/isovar
2026-10-12T19:02:58,079   copying isovar/main.py -> build/lib/isovar
2026-10-12T19:02:58,082   copying isovar/assembly.py -> build/lib/isovar
2026-10-12T19:02:58,084   copying isovar/protein_sequence_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,086   copying isovar/read_metadata.py -> build/lib/isovar
2026-10-12T19:02:58,088   copying isovar/allele_read_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,090   copying isovar/uorf_catalog.py -> build/lib/isovar
2026-10-12T19:02:58,093   copying isovar/protein_sequence_creator.py -> build/lib/isovar
2026-10-12T19:02:58,095   copying isovar/audit_bundle.py -> build/lib/isovar
2026-10-12T19:02:58,097   copying isovar/orf_start.py -> build/lib/isovar
2026-10-12T19:02:58,100   copying isovar/translation_key.py -> build/lib/isovar
2026-10-12T19:02:58,101   copying isovar/variant_sequence_creator.py -> build/lib/isovar
2026-10-12T19:02:58,103   copying isovar/protein_hypotheses.py -> build/lib/isovar
2026-10-12T19:02:58,106   copying isovar/cell_evidence.py -> build/lib/isovar
2026-10-12T19:02:58,108   copying isovar/sv_rna_dense.py -> build/lib/isovar
2026-10-12T19:02:58,110   copying isovar/genetic_code.py -> build/lib/isovar
2026-10-12T19:02:58,112   copying isovar/phase_group.py -> build/lib/isovar
2026-10-12T19:02:58,114   copying isovar/sv_rna_relations.py -> build/lib/isovar
2026-10-12T19:02:58,115   copying isovar/value_object.py -> build/lib/isovar
2026-10-12T19:02:58,117   copying isovar/orf_inclusion.py -> build/lib/isovar
2026-10-12T19:02:58,119   copying isovar/translation.py -> build/lib/isovar
2026-10-12T19:02:58,122   copying isovar/alignment_score.py -> build/lib/isovar
2026-10-12T19:02:58,123   copying isovar/logging.py -> build/lib/isovar
2026-10-12T19:02:58,125   copying isovar/mutant_transcript_source.py -> build/lib/isovar
2026-10-12T19:02:58,127   copying isovar/variant_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,129   copying isovar/common.py -> build/lib/isovar
2026-10-12T19:02:58,130   copying isovar/__main__.py -> build/lib/isovar
2026-10-12T19:02:58,132   copying isovar/string_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,134   copying isovar/fusion_visualization.py -> build/lib/isovar
2026-10-12T19:02:58,136   copying isovar/rna_candidate_support.py -> build/lib/isovar
2026-10-12T19:02:58,139   copying isovar/read_collector.py -> build/lib/isovar
2026-10-12T19:02:58,142   copying isovar/cell_umi.py -> build/lib/isovar
2026-10-12T19:02:58,144   copying isovar/isovar_result.py -> build/lib/isovar
2026-10-12T19:02:58,147   copying isovar/filtering.py -> build/lib/isovar
2026-10-12T19:02:58,149   copying isovar/reference_sequence_key.py -> build/lib/isovar
2026-10-12T19:02:58,152   copying isovar/sv_rna.py -> build/lib/isovar
2026-10-12T19:02:58,156   copying isovar/transcript_assembly_edit.py -> build/lib/isovar
2026-10-12T19:02:58,158   copying isovar/variant_sequence.py -> build/lib/isovar
2026-10-12T19:02:58,160   copying isovar/base_quality.py -> build/lib/isovar
2026-10-12T19:02:58,163   copying isovar/locus_read.py -> build/lib/isovar
2026-10-12T19:02:58,165   copying isovar/default_parameters.py -> build/lib/isovar
2026-10-12T19:02:58,167   copying isovar/allele_interpretations.py -> build/lib/isovar
2026-10-12T19:02:58,170   copying isovar/phasing.py -> build/lib/isovar
2026-10-12T19:02:58,173   copying isovar/dataframe_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,175   copying isovar/protein_sequence.py -> build/lib/isovar
2026-10-12T19:02:58,177   copying isovar/reference_coding_sequence_key.py -> build/lib/isovar
2026-10-12T19:02:58,179   copying isovar/dna.py -> build/lib/isovar
2026-10-12T19:02:58,181   copying isovar/rna_evidence.py -> build/lib/isovar
2026-10-12T19:02:58,184   copying isovar/germline_evidence.py -> build/lib/isovar
2026-10-12T19:02:58,186   copying isovar/reference_context.py -> build/lib/isovar
2026-10-12T19:02:58,189   copying isovar/fusion.py -> build/lib/isovar
2026-10-12T19:02:58,191   copying isovar/aligned_reference_prefix.py -> build/lib/isovar
2026-10-12T19:02:58,193   copying isovar/read_identity.py -> build/lib/isovar
2026-10-12T19:02:58,196   copying isovar/sid_audit_bundle.py -> build/lib/isovar
2026-10-12T19:02:58,198   copying isovar/cell_reconstruction.py -> build/lib/isovar
2026-10-12T19:02:58,200   copying isovar/sv_rna_comparison.py -> build/lib/isovar
2026-10-12T19:02:58,203   copying isovar/variant_orf.py -> build/lib/isovar
2026-10-12T19:02:58,205   copying isovar/initiation_context.py -> build/lib/isovar
2026-10-12T19:02:58,207   copying isovar/dataframe_builder.py -> build/lib/isovar
2026-10-12T19:02:58,210   copying isovar/known_variants.py -> build/lib/isovar
2026-10-12T19:02:58,211   copying isovar/sv_rna_orf_export.py -> build/lib/isovar
2026-10-12T19:02:58,214   copying isovar/transcript_edit_helpers.py -> build/lib/isovar
2026-10-12T19:02:58,216   copying isovar/read_evidence.py -> build/lib/isovar
2026-10-12T19:02:58,218   copying isovar/sid_data.py -> build/lib/isovar
2026-10-12T19:02:58,221   copying isovar/audit_replay.py -> build/lib/isovar
2026-10-12T19:02:58,224   creating build/lib/isovar/cli
2026-10-12T19:02:58,225   copying isovar/cli/isovar_variant_reads.py -> build/lib/isovar/cli
2026-10-12T19:02:58,227   copying isovar/cli/isovar_allele_interpretations.py -> build/lib/isovar/cli
2026-10-12T19:02:58,229   copying isovar/cli/__init__.py -> build/lib/isovar/cli
2026-10-12T19:02:58,231   copying isovar/cli/isovar_translations.py -> build/lib/isovar/cli
2026-10-12T19:02:58,233   copying isovar/cli/isovar_plot.py -> build/lib/isovar/cli
2026-10-12T19:02:58,235   copying isovar/cli/commands.py -> build/lib/isovar/cli
2026-10-12T19:02:58,237   copying isovar/cli/validation.py -> build/lib/isovar/cli
2026-10-12T19:02:58,239   copying isovar/cli/variant_sequences_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,241   copying isovar/cli/isovar_reference_contexts.py -> build/lib/isovar/cli
2026-10-12T19:02:58,242   copying isovar/cli/main_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,245   copying isovar/cli/isovar_main.py -> build/lib/isovar/cli
2026-10-12T19:02:58,247   copying isovar/cli/isovar_uorf_evidence.py -> build/lib/isovar/cli
2026-10-12T19:02:58,249   copying isovar/cli/reference_context_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,250   copying isovar/cli/isovar_protein_hypotheses.py -> build/lib/isovar/cli
2026-10-12T19:02:58,253   copying isovar/cli/filter_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,254   copying isovar/cli/isovar_audit_bundle.py -> build/lib/isovar/cli
2026-10-12T19:02:58,257   copying isovar/cli/base_quality_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,258   copying isovar/cli/isovar_allele_counts.py -> build/lib/isovar/cli
2026-10-12T19:02:58,260   copying isovar/cli/isovar_protein_sequences.py -> build/lib/isovar/cli
2026-10-12T19:02:58,262   copying isovar/cli/output_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,264   copying isovar/cli/protein_sequence_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,266   copying isovar/cli/rna_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,269   copying isovar/cli/isovar_variant_sequences.py -> build/lib/isovar/cli
2026-10-12T19:02:58,271   copying isovar/cli/isovar_allele_reads.py -> build/lib/isovar/cli
2026-10-12T19:02:58,273   copying isovar/cli/isovar_sv_rna.py -> build/lib/isovar/cli
2026-10-12T19:02:58,275   copying isovar/cli/translation_args.py -> build/lib/isovar/cli
2026-10-12T19:02:58,277   copying isovar/cli/isovar_fusion.py -> build/lib/isovar/cli
2026-10-12T19:02:58,281   running egg_info
2026-10-12T19:02:58,290   writing isovar.egg-info/PKG-INFO
2026-10-12T19:02:58,296   writing dependency_links to isovar.egg-info/dependency_links.txt
2026-10-12T19:02:58,298   writing entry points to isovar.egg-info/entry_points.txt
2026-10-12T19:02:58,300   writing requirements to isovar.egg-info/requires.txt
2026-10-12T19:02:58,301   writing top-level names to isovar.egg-info/top_level.txt
2026-10-12T19:02:58,335   reading manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:58,357   reading manifest template 'MANIFEST.in'
2026-10-12T19:02:58,412   adding license file 'LICENSE'
2026-10-12T19:02:58,431   writing manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-12T19:02:58,457   creating build/lib/isovar/data/sid-reads
2026-10-12T19:02:58,458   copying isovar/data/sid-reads/manifest.json -> build/lib/isovar/data/sid-reads
2026-10-12T19:02:58,648   copying isovar/data/sid-reads/acquisition.json -> build/lib/isovar/data/sid-reads
2026-10-12T19:02:58,651   copying isovar/data/sid-reads/recipe.json -> build/lib/isovar/data/sid-reads
2026-10-12T19:02:58,713   creating build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,714   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,726   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,728   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,732   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,738   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,741   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,745   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,748   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,751   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,759   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,763   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,769   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,780   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,791   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,797   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,800   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,804   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,807   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,810   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,816   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,865   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,869   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,878   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,880   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,884   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,894   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,897   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,901   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,907   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,921   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,924   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,927   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,930   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,932   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,936   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,939   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,946   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,949   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,956   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,958   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,974   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,976   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,988   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:58,991   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,011   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,018   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,035   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,040   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,051   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,056   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,060   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,063   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,066   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,071   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,073   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,080   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,083   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,090   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,093   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,095   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,100   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,104   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,115   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,127   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,129   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,132   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,138   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,140   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,143   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,146   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,152   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,155   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,159   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,167   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,169   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,173   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,176   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,180   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,183   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,186   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,189   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,192   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,196   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,199   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,203   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,212   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,217   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,220   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,223   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,226   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,228   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,232   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,236   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,244   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,264   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,268   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,271   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,274   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,277   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,283   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,293   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,298   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,302   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,307   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,311   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,314   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,318   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,331   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,334   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,337   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,341   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,350   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,354   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,358   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,365   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,370   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,373   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-12T19:02:59,378   creating build/lib/isovar/data/uorf-evidence
2026-10-12T19:02:59,379   copying isovar/data/uorf-evidence/manifest.json -> build/lib/isovar/data/uorf-evidence
2026-10-12T19:02:59,381   copying isovar/data/uorf-evidence/NOTICE.txt -> build/lib/isovar/data/uorf-evidence
2026-10-12T19:02:59,383   copying isovar/data/uorf-evidence/catalog.json.gz -> build/lib/isovar/data/uorf-evidence
2026-10-12T19:02:59,396   copying isovar/data/uorf-evidence/AUTHOR-LICENSE.txt -> build/lib/isovar/data/uorf-evidence
2026-10-12T19:02:59,485   installing to build/bdist.linux-armv7l/wheel
2026-10-12T19:02:59,485   running install
2026-10-12T19:02:59,511   running install_lib
2026-10-12T19:02:59,517   creating build/bdist.linux-armv7l/wheel
2026-10-12T19:02:59,520   creating build/bdist.linux-armv7l/wheel/isovar
2026-10-12T19:02:59,522   creating build/bdist.linux-armv7l/wheel/isovar/data
2026-10-12T19:02:59,524   creating build/bdist.linux-armv7l/wheel/isovar/data/uorf-evidence
2026-10-12T19:02:59,525   copying build/lib/isovar/data/uorf-evidence/manifest.json -> build/bdist.linux-armv7l/wheel/./isovar/data/uorf-evidence
2026-10-12T19:02:59,528   copying build/lib/isovar/data/uorf-evidence/NOTICE.txt -> build/bdist.linux-armv7l/wheel/./isovar/data/uorf-evidence
2026-10-12T19:02:59,530   copying build/lib/isovar/data/uorf-evidence/catalog.json.gz -> build/bdist.linux-armv7l/wheel/./isovar/data/uorf-evidence
2026-10-12T19:02:59,543   copying build/lib/isovar/data/uorf-evidence/AUTHOR-LICENSE.txt -> build/bdist.linux-armv7l/wheel/./isovar/data/uorf-evidence
2026-10-12T19:02:59,546   creating build/bdist.linux-armv7l/wheel/isovar/data/sid-reads
2026-10-12T19:02:59,550   creating build/bdist.linux-armv7l/wheel/isovar/data/sid-reads/sources
2026-10-12T19:02:59,552   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,562   copying build/lib/isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,564   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,568   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,573   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,577   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,580   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,583   copying build/lib/isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,587   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,599   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,604   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,611   copying build/lib/isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,625   copying build/lib/isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,638   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,645   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,648   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,652   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,655   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,658   copying build/lib/isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,663   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,702   copying build/lib/isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,706   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,715   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,718   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,721   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,730   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,733   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,736   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,742   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,754   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,757   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,760   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,762   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,765   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,768   copying build/lib/isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,770   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,777   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,781   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,787   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,789   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,804   copying build/lib/isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,806   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,816   copying build/lib/isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,818   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,839   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,845   copying build/lib/isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,862   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,867   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,877   copying build/lib/isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,880   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,883   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,886   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,888   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,893   copying build/lib/isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,894   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,900   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,903   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,908   copying build/lib/isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,911   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,913   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,918   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,921   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,930   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,941   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,944   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,946   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,952   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,955   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,957   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,960   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,967   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,969   copying build/lib/isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,973   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,979   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,982   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,985   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,988   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,991   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,994   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:02:59,997   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,000   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,002   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,005   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,008   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,011   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,017   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,022   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,024   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,027   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,029   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,032   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,035   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,038   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,047   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,108   copying build/lib/isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,112   copying build/lib/isovar/data/sid-reads/sources/c300dbf41837763346768069.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,114   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,117   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,121   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,127   copying build/lib/isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,136   copying build/lib/isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,140   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
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2026-10-12T19:03:00,154   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,156   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
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2026-10-12T19:03:00,204   copying build/lib/isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
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2026-10-12T19:03:00,214   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-12T19:03:00,220   copying build/lib/isovar/data/sid-reads/manifest.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-12T19:03:00,431   copying build/lib/isovar/data/sid-reads/acquisition.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-12T19:03:00,433   copying build/lib/isovar/data/sid-reads/recipe.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-12T19:03:00,496   copying build/lib/isovar/read_phasing.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,498   copying build/lib/isovar/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,500   copying build/lib/isovar/visualization.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,503   copying build/lib/isovar/protein_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,506   copying build/lib/isovar/reference_context_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,508   copying build/lib/isovar/variant_orf_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,510   copying build/lib/isovar/sv_rna_orfs.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,512   copying build/lib/isovar/transcript_compatibility.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,514   copying build/lib/isovar/isovar_result_provider.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,516   copying build/lib/isovar/read_end_inference.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,518   copying build/lib/isovar/chimeric_alignment.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,521   copying build/lib/isovar/variant_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,523   copying build/lib/isovar/read_lineage.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,525   copying build/lib/isovar/allele_read.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,528   copying build/lib/isovar/translation_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,530   copying build/lib/isovar/effect_prediction.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,532   copying build/lib/isovar/main.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,534   copying build/lib/isovar/assembly.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,536   copying build/lib/isovar/protein_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,539   copying build/lib/isovar/read_metadata.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,540   copying build/lib/isovar/allele_read_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,543   copying build/lib/isovar/uorf_catalog.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,545   copying build/lib/isovar/protein_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,548   copying build/lib/isovar/audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,550   copying build/lib/isovar/orf_start.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,552   copying build/lib/isovar/translation_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,554   copying build/lib/isovar/variant_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,556   copying build/lib/isovar/protein_hypotheses.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,558   copying build/lib/isovar/cell_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,561   copying build/lib/isovar/sv_rna_dense.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,563   copying build/lib/isovar/genetic_code.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,565   copying build/lib/isovar/phase_group.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,567   copying build/lib/isovar/sv_rna_relations.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,569   copying build/lib/isovar/value_object.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,571   copying build/lib/isovar/orf_inclusion.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,573   copying build/lib/isovar/translation.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,575   copying build/lib/isovar/alignment_score.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,577   copying build/lib/isovar/logging.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,579   copying build/lib/isovar/mutant_transcript_source.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,581   copying build/lib/isovar/variant_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,583   copying build/lib/isovar/common.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,585   copying build/lib/isovar/__main__.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,586   copying build/lib/isovar/string_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,588   copying build/lib/isovar/fusion_visualization.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,590   copying build/lib/isovar/rna_candidate_support.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,593   copying build/lib/isovar/read_collector.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,596   copying build/lib/isovar/cell_umi.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,598   copying build/lib/isovar/isovar_result.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,601   copying build/lib/isovar/filtering.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,603   copying build/lib/isovar/reference_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,605   copying build/lib/isovar/sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,609   copying build/lib/isovar/transcript_assembly_edit.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,610   copying build/lib/isovar/variant_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,613   copying build/lib/isovar/base_quality.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,615   copying build/lib/isovar/locus_read.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,617   copying build/lib/isovar/default_parameters.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,619   copying build/lib/isovar/allele_interpretations.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,622   copying build/lib/isovar/phasing.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,624   copying build/lib/isovar/dataframe_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,626   copying build/lib/isovar/protein_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,629   copying build/lib/isovar/reference_coding_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,632   creating build/bdist.linux-armv7l/wheel/isovar/cli
2026-10-12T19:03:00,633   copying build/lib/isovar/cli/isovar_variant_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,635   copying build/lib/isovar/cli/isovar_allele_interpretations.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,636   copying build/lib/isovar/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,638   copying build/lib/isovar/cli/isovar_translations.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,640   copying build/lib/isovar/cli/isovar_plot.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,642   copying build/lib/isovar/cli/commands.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,644   copying build/lib/isovar/cli/validation.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,646   copying build/lib/isovar/cli/variant_sequences_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,648   copying build/lib/isovar/cli/isovar_reference_contexts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,650   copying build/lib/isovar/cli/main_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,652   copying build/lib/isovar/cli/isovar_main.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,654   copying build/lib/isovar/cli/isovar_uorf_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,656   copying build/lib/isovar/cli/reference_context_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,658   copying build/lib/isovar/cli/isovar_protein_hypotheses.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,660   copying build/lib/isovar/cli/filter_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,662   copying build/lib/isovar/cli/isovar_audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,664   copying build/lib/isovar/cli/base_quality_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,666   copying build/lib/isovar/cli/isovar_allele_counts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,668   copying build/lib/isovar/cli/isovar_protein_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,669   copying build/lib/isovar/cli/output_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,671   copying build/lib/isovar/cli/protein_sequence_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,673   copying build/lib/isovar/cli/rna_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,675   copying build/lib/isovar/cli/isovar_variant_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,677   copying build/lib/isovar/cli/isovar_allele_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,679   copying build/lib/isovar/cli/isovar_sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,681   copying build/lib/isovar/cli/translation_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,684   copying build/lib/isovar/cli/isovar_fusion.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-12T19:03:00,686   copying build/lib/isovar/dna.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,688   copying build/lib/isovar/rna_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,690   copying build/lib/isovar/germline_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,692   copying build/lib/isovar/reference_context.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,694   copying build/lib/isovar/fusion.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,696   copying build/lib/isovar/aligned_reference_prefix.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,698   copying build/lib/isovar/read_identity.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,700   copying build/lib/isovar/sid_audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,702   copying build/lib/isovar/cell_reconstruction.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,705   copying build/lib/isovar/sv_rna_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,707   copying build/lib/isovar/variant_orf.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,709   copying build/lib/isovar/initiation_context.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,711   copying build/lib/isovar/dataframe_builder.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,713   copying build/lib/isovar/known_variants.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,715   copying build/lib/isovar/sv_rna_orf_export.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,718   copying build/lib/isovar/transcript_edit_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,720   copying build/lib/isovar/read_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,722   copying build/lib/isovar/sid_data.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,725   copying build/lib/isovar/audit_replay.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-12T19:03:00,727   running install_egg_info
2026-10-12T19:03:00,731   Copying isovar.egg-info to build/bdist.linux-armv7l/wheel/./isovar-1.47.1-py3.11.egg-info
2026-10-12T19:03:00,744   running install_scripts
2026-10-12T19:03:00,756   creating build/bdist.linux-armv7l/wheel/isovar-1.47.1.dist-info/WHEEL
2026-10-12T19:03:00,758   creating '/tmp/pip-wheel-46czmtwb/.tmp-imzulj4_/isovar-1.47.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-10-12T19:03:00,762   adding 'isovar/__init__.py'
2026-10-12T19:03:00,763   adding 'isovar/__main__.py'
2026-10-12T19:03:00,765   adding 'isovar/aligned_reference_prefix.py'
2026-10-12T19:03:00,767   adding 'isovar/alignment_score.py'
2026-10-12T19:03:00,769   adding 'isovar/allele_interpretations.py'
2026-10-12T19:03:00,771   adding 'isovar/allele_read.py'
2026-10-12T19:03:00,773   adding 'isovar/allele_read_helpers.py'
2026-10-12T19:03:00,775   adding 'isovar/assembly.py'
2026-10-12T19:03:00,777   adding 'isovar/audit_bundle.py'
2026-10-12T19:03:00,779   adding 'isovar/audit_replay.py'
2026-10-12T19:03:00,781   adding 'isovar/base_quality.py'
2026-10-12T19:03:00,783   adding 'isovar/cell_evidence.py'
2026-10-12T19:03:00,785   adding 'isovar/cell_reconstruction.py'
2026-10-12T19:03:00,788   adding 'isovar/cell_umi.py'
2026-10-12T19:03:00,789   adding 'isovar/chimeric_alignment.py'
2026-10-12T19:03:00,791   adding 'isovar/common.py'
2026-10-12T19:03:00,793   adding 'isovar/dataframe_builder.py'
2026-10-12T19:03:00,794   adding 'isovar/dataframe_helpers.py'
2026-10-12T19:03:00,797   adding 'isovar/default_parameters.py'
2026-10-12T19:03:00,798   adding 'isovar/dna.py'
2026-10-12T19:03:00,799   adding 'isovar/effect_prediction.py'
2026-10-12T19:03:00,801   adding 'isovar/filtering.py'
2026-10-12T19:03:00,804   adding 'isovar/fusion.py'
2026-10-12T19:03:00,806   adding 'isovar/fusion_visualization.py'
2026-10-12T19:03:00,808   adding 'isovar/genetic_code.py'
2026-10-12T19:03:00,810   adding 'isovar/germline_evidence.py'
2026-10-12T19:03:00,812   adding 'isovar/initiation_context.py'
2026-10-12T19:03:00,816   adding 'isovar/isovar_result.py'
2026-10-12T19:03:00,817   adding 'isovar/isovar_result_provider.py'
2026-10-12T19:03:00,818   adding 'isovar/known_variants.py'
2026-10-12T19:03:00,820   adding 'isovar/locus_read.py'
2026-10-12T19:03:00,821   adding 'isovar/logging.py'
2026-10-12T19:03:00,823   adding 'isovar/main.py'
2026-10-12T19:03:00,824   adding 'isovar/mutant_transcript_source.py'
2026-10-12T19:03:00,827   adding 'isovar/orf_inclusion.py'
2026-10-12T19:03:00,828   adding 'isovar/orf_start.py'
2026-10-12T19:03:00,829   adding 'isovar/phase_group.py'
2026-10-12T19:03:00,832   adding 'isovar/phasing.py'
2026-10-12T19:03:00,834   adding 'isovar/protein_comparison.py'
2026-10-12T19:03:00,837   adding 'isovar/protein_hypotheses.py'
2026-10-12T19:03:00,839   adding 'isovar/protein_sequence.py'
2026-10-12T19:03:00,842   adding 'isovar/protein_sequence_creator.py'
2026-10-12T19:03:00,844   adding 'isovar/protein_sequence_helpers.py'
2026-10-12T19:03:00,850   adding 'isovar/read_collector.py'
2026-10-12T19:03:00,852   adding 'isovar/read_end_inference.py'
2026-10-12T19:03:00,854   adding 'isovar/read_evidence.py'
2026-10-12T19:03:00,855   adding 'isovar/read_identity.py'
2026-10-12T19:03:00,857   adding 'isovar/read_lineage.py'
2026-10-12T19:03:00,858   adding 'isovar/read_metadata.py'
2026-10-12T19:03:00,861   adding 'isovar/read_phasing.py'
2026-10-12T19:03:00,862   adding 'isovar/reference_coding_sequence_key.py'
2026-10-12T19:03:00,864   adding 'isovar/reference_context.py'
2026-10-12T19:03:00,865   adding 'isovar/reference_context_helpers.py'
2026-10-12T19:03:00,866   adding 'isovar/reference_sequence_key.py'
2026-10-12T19:03:00,869   adding 'isovar/rna_candidate_support.py'
2026-10-12T19:03:00,871   adding 'isovar/rna_evidence.py'
2026-10-12T19:03:00,873   adding 'isovar/sid_audit_bundle.py'
2026-10-12T19:03:00,876   adding 'isovar/sid_data.py'
2026-10-12T19:03:00,877   adding 'isovar/string_helpers.py'
2026-10-12T19:03:00,890   adding 'isovar/sv_rna.py'
2026-10-12T19:03:00,892   adding 'isovar/sv_rna_comparison.py'
2026-10-12T19:03:00,894   adding 'isovar/sv_rna_dense.py'
2026-10-12T19:03:00,897   adding 'isovar/sv_rna_orf_export.py'
2026-10-12T19:03:00,899   adding 'isovar/sv_rna_orfs.py'
2026-10-12T19:03:00,900   adding 'isovar/sv_rna_relations.py'
2026-10-12T19:03:00,901   adding 'isovar/transcript_assembly_edit.py'
2026-10-12T19:03:00,902   adding 'isovar/transcript_compatibility.py'
2026-10-12T19:03:00,905   adding 'isovar/transcript_edit_helpers.py'
2026-10-12T19:03:00,906   adding 'isovar/translation.py'
2026-10-12T19:03:00,907   adding 'isovar/translation_helpers.py'
2026-10-12T19:03:00,909   adding 'isovar/translation_key.py'
2026-10-12T19:03:00,911   adding 'isovar/uorf_catalog.py'
2026-10-12T19:03:00,913   adding 'isovar/value_object.py'
2026-10-12T19:03:00,915   adding 'isovar/variant_helpers.py'
2026-10-12T19:03:00,917   adding 'isovar/variant_orf.py'
2026-10-12T19:03:00,918   adding 'isovar/variant_orf_helpers.py'
2026-10-12T19:03:00,920   adding 'isovar/variant_sequence.py'
2026-10-12T19:03:00,922   adding 'isovar/variant_sequence_creator.py'
2026-10-12T19:03:00,925   adding 'isovar/variant_sequence_helpers.py'
2026-10-12T19:03:00,929   adding 'isovar/visualization.py'
2026-10-12T19:03:00,932   adding 'isovar/cli/__init__.py'
2026-10-12T19:03:00,933   adding 'isovar/cli/base_quality_args.py'
2026-10-12T19:03:00,934   adding 'isovar/cli/commands.py'
2026-10-12T19:03:00,936   adding 'isovar/cli/filter_args.py'
2026-10-12T19:03:00,937   adding 'isovar/cli/isovar_allele_counts.py'
2026-10-12T19:03:00,938   adding 'isovar/cli/isovar_allele_interpretations.py'
2026-10-12T19:03:00,940   adding 'isovar/cli/isovar_allele_reads.py'
2026-10-12T19:03:00,941   adding 'isovar/cli/isovar_audit_bundle.py'
2026-10-12T19:03:00,942   adding 'isovar/cli/isovar_fusion.py'
2026-10-12T19:03:00,944   adding 'isovar/cli/isovar_main.py'
2026-10-12T19:03:00,945   adding 'isovar/cli/isovar_plot.py'
2026-10-12T19:03:00,947   adding 'isovar/cli/isovar_protein_hypotheses.py'
2026-10-12T19:03:00,948   adding 'isovar/cli/isovar_protein_sequences.py'
2026-10-12T19:03:00,949   adding 'isovar/cli/isovar_reference_contexts.py'
2026-10-12T19:03:00,951   adding 'isovar/cli/isovar_sv_rna.py'
2026-10-12T19:03:00,952   adding 'isovar/cli/isovar_translations.py'
2026-10-12T19:03:00,954   adding 'isovar/cli/isovar_uorf_evidence.py'
2026-10-12T19:03:00,955   adding 'isovar/cli/isovar_variant_reads.py'
2026-10-12T19:03:00,956   adding 'isovar/cli/isovar_variant_sequences.py'
2026-10-12T19:03:00,958   adding 'isovar/cli/main_args.py'
2026-10-12T19:03:00,959   adding 'isovar/cli/output_args.py'
2026-10-12T19:03:00,960   adding 'isovar/cli/protein_sequence_args.py'
2026-10-12T19:03:00,962   adding 'isovar/cli/reference_context_args.py'
2026-10-12T19:03:00,963   adding 'isovar/cli/rna_args.py'
2026-10-12T19:03:00,965   adding 'isovar/cli/translation_args.py'
2026-10-12T19:03:00,966   adding 'isovar/cli/validation.py'
2026-10-12T19:03:00,968   adding 'isovar/cli/variant_sequences_args.py'
2026-10-12T19:03:00,970   adding 'isovar/data/sid-reads/acquisition.json'
2026-10-12T19:03:01,991   adding 'isovar/data/sid-reads/manifest.json'
2026-10-12T19:03:02,469   adding 'isovar/data/sid-reads/recipe.json'
2026-10-12T19:03:02,503   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam'
2026-10-12T19:03:02,505   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai'
2026-10-12T19:03:02,518   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json'
2026-10-12T19:03:02,522   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam'
2026-10-12T19:03:02,524   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai'
2026-10-12T19:03:02,525   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json'
2026-10-12T19:03:02,549   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam'
2026-10-12T19:03:02,554   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai'
2026-10-12T19:03:02,645   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json'
2026-10-12T19:03:02,668   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam'
2026-10-12T19:03:02,673   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai'
2026-10-12T19:03:02,685   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json'
2026-10-12T19:03:02,688   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam'
2026-10-12T19:03:02,690   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam.bai'
2026-10-12T19:03:02,692   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json'
2026-10-12T19:03:02,698   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam'
2026-10-12T19:03:02,700   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai'
2026-10-12T19:03:02,713   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json'
2026-10-12T19:03:02,719   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam'
2026-10-12T19:03:02,721   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai'
2026-10-12T19:03:02,723   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json'
2026-10-12T19:03:02,742   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam'
2026-10-12T19:03:02,754   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai'
2026-10-12T19:03:02,766   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json'
2026-10-12T19:03:02,772   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam'
2026-10-12T19:03:02,774   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai'
2026-10-12T19:03:02,775   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json'
2026-10-12T19:03:02,790   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam'
2026-10-12T19:03:02,799   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam.bai'
2026-10-12T19:03:02,803   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json'
2026-10-12T19:03:02,805   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam'
2026-10-12T19:03:02,806   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai'
2026-10-12T19:03:02,807   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json'
2026-10-12T19:03:02,811   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam'
2026-10-12T19:03:02,816   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai'
2026-10-12T19:03:02,831   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json'
2026-10-12T19:03:02,836   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam'
2026-10-12T19:03:02,838   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai'
2026-10-12T19:03:02,840   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json'
2026-10-12T19:03:02,842   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam'
2026-10-12T19:03:02,845   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai'
2026-10-12T19:03:02,847   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json'
2026-10-12T19:03:02,852   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam'
2026-10-12T19:03:02,855   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai'
2026-10-12T19:03:02,867   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json'
2026-10-12T19:03:02,894   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam'
2026-10-12T19:03:02,905   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai'
2026-10-12T19:03:02,909   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json'
2026-10-12T19:03:02,961   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam'
2026-10-12T19:03:02,969   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai'
2026-10-12T19:03:02,987   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json'
2026-10-12T19:03:02,992   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam'
2026-10-12T19:03:02,994   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai'
2026-10-12T19:03:02,996   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json'
2026-10-12T19:03:03,000   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam'
2026-10-12T19:03:03,002   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai'
2026-10-12T19:03:03,004   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json'
2026-10-12T19:03:03,008   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam'
2026-10-12T19:03:03,010   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai'
2026-10-12T19:03:03,011   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json'
2026-10-12T19:03:03,014   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam'
2026-10-12T19:03:03,016   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai'
2026-10-12T19:03:03,018   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json'
2026-10-12T19:03:03,024   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam'
2026-10-12T19:03:03,026   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai'
2026-10-12T19:03:03,039   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json'
2026-10-12T19:03:03,046   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam'
2026-10-12T19:03:03,051   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai'
2026-10-12T19:03:03,063   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json'
2026-10-12T19:03:03,072   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam'
2026-10-12T19:03:03,075   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai'
2026-10-12T19:03:03,076   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json'
2026-10-12T19:03:03,106   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam'
2026-10-12T19:03:03,136   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai'
2026-10-12T19:03:03,152   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json'
2026-10-12T19:03:03,156   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.bam'
2026-10-12T19:03:03,158   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.bam.bai'
2026-10-12T19:03:03,173   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json'
2026-10-12T19:03:03,181   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam'
2026-10-12T19:03:03,185   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai'
2026-10-12T19:03:03,187   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.header.json'
2026-10-12T19:03:03,195   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam'
2026-10-12T19:03:03,199   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai'
2026-10-12T19:03:03,214   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json'
2026-10-12T19:03:03,308   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam'
2026-10-12T19:03:03,323   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai'
2026-10-12T19:03:03,341   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json'
2026-10-12T19:03:03,358   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam'
2026-10-12T19:03:03,361   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai'
2026-10-12T19:03:03,363   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json'
2026-10-12T19:03:03,469   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam'
2026-10-12T19:03:03,485   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai'
2026-10-12T19:03:03,507   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.header.json'
2026-10-12T19:03:03,513   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam'
2026-10-12T19:03:03,515   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai'
2026-10-12T19:03:03,517   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json'
2026-10-12T19:03:03,523   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam'
2026-10-12T19:03:03,525   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai'
2026-10-12T19:03:03,538   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.header.json'
2026-10-12T19:03:03,549   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam'
2026-10-12T19:03:03,556   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai'
2026-10-12T19:03:03,568   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json'
2026-10-12T19:03:03,571   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam'
2026-10-12T19:03:03,573   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai'
2026-10-12T19:03:03,575   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json'
2026-10-12T19:03:03,581   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam'
2026-10-12T19:03:03,583   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai'
2026-10-12T19:03:03,595   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json'
2026-10-12T19:03:03,725   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam'
2026-10-12T19:03:03,743   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai'
2026-10-12T19:03:03,765   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json'
2026-10-12T19:03:03,772   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam'
2026-10-12T19:03:03,777   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam.bai'
2026-10-12T19:03:03,780   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json'
2026-10-12T19:03:03,786   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam'
2026-10-12T19:03:03,789   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai'
2026-10-12T19:03:03,792   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json'
2026-10-12T19:03:03,793   adding 'isovar/data/uorf-evidence/AUTHOR-LICENSE.txt'
2026-10-12T19:03:03,795   adding 'isovar/data/uorf-evidence/NOTICE.txt'
2026-10-12T19:03:03,874   adding 'isovar/data/uorf-evidence/catalog.json.gz'
2026-10-12T19:03:03,879   adding 'isovar/data/uorf-evidence/manifest.json'
2026-10-12T19:03:03,883   adding 'isovar-1.47.1.dist-info/licenses/LICENSE'
2026-10-12T19:03:03,888   adding 'isovar-1.47.1.dist-info/METADATA'
2026-10-12T19:03:03,889   adding 'isovar-1.47.1.dist-info/WHEEL'
2026-10-12T19:03:03,890   adding 'isovar-1.47.1.dist-info/entry_points.txt'
2026-10-12T19:03:03,890   adding 'isovar-1.47.1.dist-info/top_level.txt'
2026-10-12T19:03:03,894   adding 'isovar-1.47.1.dist-info/RECORD'
2026-10-12T19:03:04,027   removing build/bdist.linux-armv7l/wheel
2026-10-12T19:03:04,188   Building wheel for isovar (pyproject.toml): finished with status 'done'
2026-10-12T19:03:04,435   Created wheel for isovar: filename=isovar-1.47.1-py3-none-any.whl size=12144940 sha256=3e6adb7e6549a243af0ca5901aad4a7ebf46132ee4fd3c1f0f23c63efa37c4cd
2026-10-12T19:03:04,437   Stored in directory: /tmp/pip-ephem-wheel-cache-kdxco3zo/wheels/2f/e7/cc/a372923fdb91d880a717485d92012fb8f483247fd56d632322
2026-10-12T19:03:04,464 Successfully built isovar
2026-10-12T19:03:04,753 Removed build tracker: '/tmp/pip-build-tracker-ri_9i1p9'