2026-10-16T06:15:50,501 Created temporary directory: /tmp/pip-ephem-wheel-cache-3doqof0e 2026-10-16T06:15:50,503 Created temporary directory: /tmp/pip-build-tracker-j4mnzc2n 2026-10-16T06:15:50,503 Initialized build tracking at /tmp/pip-build-tracker-j4mnzc2n 2026-10-16T06:15:50,504 Created build tracker: /tmp/pip-build-tracker-j4mnzc2n 2026-10-16T06:15:50,504 Entered build tracker: /tmp/pip-build-tracker-j4mnzc2n 2026-10-16T06:15:50,505 Created temporary directory: /tmp/pip-wheel-docqjq1e 2026-10-16T06:15:50,508 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-16T06:15:50,510 Created temporary directory: /tmp/pip-ephem-wheel-cache-hne0v7ti 2026-10-16T06:15:50,531 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-16T06:15:50,535 2 location(s) to search for versions of varcode: 2026-10-16T06:15:50,535 * https://pypi.org/simple/varcode/ 2026-10-16T06:15:50,535 * https://www.piwheels.org/simple/varcode/ 2026-10-16T06:15:50,536 Fetching project page and analyzing links: https://pypi.org/simple/varcode/ 2026-10-16T06:15:50,537 Getting page https://pypi.org/simple/varcode/ 2026-10-16T06:15:50,538 Found index url https://pypi.org/simple 2026-10-16T06:15:50,731 Fetched page https://pypi.org/simple/varcode/ as application/vnd.pypi.simple.v1+json 2026-10-16T06:15:50,796 Found link https://files.pythonhosted.org/packages/77/c8/f88b644d2ebbc1bf72dd5d1609c2e399e14e41c90b4b364ef3968e304b68/varcode-0.0.0.tar.gz (from 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https://files.pythonhosted.org/packages/5b/1d/d36a4727e9e37bc5e2950d4e13e7a65f9bad017a38f93690afd04deaaf97/varcode-0.1.1.tar.gz (from https://pypi.org/simple/varcode/), version: 0.1.1 2026-10-16T06:15:50,801 Found link https://files.pythonhosted.org/packages/08/e1/748d769245a37fa44b09b78e8c5c6337ff43a29c3eab2559598144501d29/varcode-0.2.1.tar.gz (from https://pypi.org/simple/varcode/), version: 0.2.1 2026-10-16T06:15:50,801 Found link https://files.pythonhosted.org/packages/d5/6d/d0bd2c083095da4e6906108ff619e30e7d86b3d1e99abfae49bc29d1e823/varcode-0.3.1.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.1 2026-10-16T06:15:50,802 Found link https://files.pythonhosted.org/packages/55/a0/3fd4383d537e9e490ec757f7828cc71c512ae85a391fe31c7ca22813af90/varcode-0.3.2.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.2 2026-10-16T06:15:50,803 Found link 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https://files.pythonhosted.org/packages/77/2a/061385e3354d656547cf3304b1ad793b8257c9461ba04490106164e318ae/varcode-0.3.7.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.7 2026-10-16T06:15:50,806 Found link https://files.pythonhosted.org/packages/d9/86/bd9d25861f8dbf64ef8638465412f3781db970dee93bf0c580ee64b65f53/varcode-0.3.8.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.8 2026-10-16T06:15:50,807 Found link https://files.pythonhosted.org/packages/e9/59/2d5712b8530374dc8a3f1de3a35b30ea00383dc2267ce9d554d81a042e2d/varcode-0.3.9.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.9 2026-10-16T06:15:50,807 Found link https://files.pythonhosted.org/packages/5a/bd/2e69f9495d4fcca2977c6709332e9dcf2bff4275e1b86aa0f525b725fb12/varcode-0.3.10.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.10 2026-10-16T06:15:50,808 Found link 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https://files.pythonhosted.org/packages/3a/89/0feee03c580aab4b3438091f4a806fac0059944b27ca882e98f0715603b0/varcode-0.3.16.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.16 2026-10-16T06:15:50,811 Found link https://files.pythonhosted.org/packages/9b/a9/7c93b93ef5af20931fa66db32b43f29b4c157eff26cdfb32f5b2459af307/varcode-0.3.17.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.17 2026-10-16T06:15:50,812 Found link https://files.pythonhosted.org/packages/ba/f3/a57fb7724823b7948ba60239653070a18bf8454baddb11662bd5aa5c3fea/varcode-0.3.18.tar.gz (from https://pypi.org/simple/varcode/), version: 0.3.18 2026-10-16T06:15:50,813 Found link https://files.pythonhosted.org/packages/81/6c/a41f945c1e4bf0e80e459d9ddfa9b04e7c608776f3bf19748875b7ab22a2/varcode-0.4.0.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.0 2026-10-16T06:15:50,813 Found link https://files.pythonhosted.org/packages/42/5e/5509edf379fcdd7c55e456ee09ab51f4c60597206ddfbc7b449ab0eae017/varcode-0.4.1.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.1 2026-10-16T06:15:50,814 Found link https://files.pythonhosted.org/packages/12/88/d44d94f8e8044c0ca386ade6013dd77dcddf910364f2d1e9e63028153a47/varcode-0.4.2.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.2 2026-10-16T06:15:50,815 Found link https://files.pythonhosted.org/packages/d5/a8/b158b095d6531940d069b57ecfa556fdcf22076a57139eba31fc201c3cb1/varcode-0.4.3.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.3 2026-10-16T06:15:50,815 Found link https://files.pythonhosted.org/packages/59/73/9f22a7926154b25770e633ed75ff1a03a3abaeeeea0d9bbd62751fc78858/varcode-0.4.4.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.4 2026-10-16T06:15:50,816 Found link https://files.pythonhosted.org/packages/05/a3/5c88a683f9e905f2e339dea2e71849f5f4879e2b2ebec06dc2216914b75f/varcode-0.4.5.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.5 2026-10-16T06:15:50,817 Found link https://files.pythonhosted.org/packages/29/bb/521644ae3b14ce95f75b253b508ada79dad18eda8eaaa539ecdac93af4c6/varcode-0.4.6.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.6 2026-10-16T06:15:50,818 Found link https://files.pythonhosted.org/packages/bc/1a/bb0eded1d182f1ca3b9ed48f5887ec710df9464aa11ad83b50e45d04d6c8/varcode-0.4.7.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.7 2026-10-16T06:15:50,818 Found link https://files.pythonhosted.org/packages/7d/c7/33bbec70440d5136deb98a1e74eaf787e61c92d13d33abe3d87f856790fe/varcode-0.4.12.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.12 2026-10-16T06:15:50,819 Found link https://files.pythonhosted.org/packages/c3/5a/90bb2724abf0f2a4516bfabc22866967cbc51405ef69190c02b592a3c048/varcode-0.4.14.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.14 2026-10-16T06:15:50,820 Found link https://files.pythonhosted.org/packages/7e/7b/70d00acbabff22b9bbf0a42d250388ca7f26accd721388bd9c76692c21e3/varcode-0.4.15.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.15 2026-10-16T06:15:50,820 Found link https://files.pythonhosted.org/packages/86/13/1dfe0bb6d3b4dd01af52050001cd912a001905aee22a9750349ce85a9558/varcode-0.4.16.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.16 2026-10-16T06:15:50,821 Found link https://files.pythonhosted.org/packages/47/6e/361d19187ebb104643e57ff5c9614dc92a066a1a5a2c92cf533d3a7f41b5/varcode-0.4.17.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.17 2026-10-16T06:15:50,821 Found link https://files.pythonhosted.org/packages/eb/0e/a7631a2432532a03d7b037b327584189e9a35717e3af322c9d178af6d889/varcode-0.4.18.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.18 2026-10-16T06:15:50,822 Found link https://files.pythonhosted.org/packages/cf/60/1b6d3af2f7c9d39623d4213c37bcce182854e7e49f3932a0084cab08f8a4/varcode-0.4.19.tar.gz (from https://pypi.org/simple/varcode/), version: 0.4.19 2026-10-16T06:15:50,823 Found link https://files.pythonhosted.org/packages/4c/21/838c7353a75bc7db0e5b8b936bce6e5cee0b406c616be440537f52d75765/varcode-0.5.0.tar.gz (from https://pypi.org/simple/varcode/), version: 0.5.0 2026-10-16T06:15:50,823 Found link https://files.pythonhosted.org/packages/24/d4/59c2b05810e301d2dc27ea8def7771c349bd907ae499433277a384a2d37b/varcode-0.5.1.tar.gz (from https://pypi.org/simple/varcode/), version: 0.5.1 2026-10-16T06:15:50,824 Found link 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https://archive1.piwheels.org/simple/varcode/varcode-0.1.1-py3-none-any.whl#sha256=470c8901b71faadb23ff67c9898089ab9d0b3b4a68a4a7f9af50fa9a0d11768a (from https://www.piwheels.org/simple/varcode/) 2026-10-16T06:15:51,508 Skipping link: No binaries permitted for varcode: https://archive1.piwheels.org/simple/varcode/varcode-0.1.0-py3-none-any.whl#sha256=83e13356265d60cee860a4bb72ff4f8aa8f1d5d0c677fec518a7c08bb89ba160 (from https://www.piwheels.org/simple/varcode/) 2026-10-16T06:15:51,509 Skipping link: No binaries permitted for varcode: https://archive1.piwheels.org/simple/varcode/varcode-0.0.3-py3-none-any.whl#sha256=35c3f383fc6bd302dc0dc00805dc27514906cbfa0f6ddd661635024b81cc3bed (from https://www.piwheels.org/simple/varcode/) 2026-10-16T06:15:51,510 Skipping link: No binaries permitted for varcode: https://archive1.piwheels.org/simple/varcode/varcode-0.0.2-py3-none-any.whl#sha256=75b17e9aad29be21e31e6e6eb7e670be2cb487b645169e1df93fb43d6bbef03f (from https://www.piwheels.org/simple/varcode/) 2026-10-16T06:15:51,510 Skipping link: not a file: https://www.piwheels.org/simple/varcode/ 2026-10-16T06:15:51,511 Skipping link: not a file: https://pypi.org/simple/varcode/ 2026-10-16T06:15:51,557 Given no hashes to check 1 links for project 'varcode': discarding no candidates 2026-10-16T06:15:51,576 Collecting varcode==10.15.1 2026-10-16T06:15:51,578 Created temporary directory: /tmp/pip-unpack-pt06tg8a 2026-10-16T06:15:51,812 Downloading varcode-10.15.1.tar.gz (4.5 MB) 2026-10-16T06:15:53,236 Added varcode==10.15.1 from https://files.pythonhosted.org/packages/64/2e/2e6452282c063451bc9cce0d237c3ba1ec0edb7de417801cff694bfe3d66/varcode-10.15.1.tar.gz to build tracker '/tmp/pip-build-tracker-j4mnzc2n' 2026-10-16T06:15:53,243 Created temporary directory: /tmp/pip-build-env-rol799zr 2026-10-16T06:15:53,250 Installing build dependencies: started 2026-10-16T06:15:53,251 Running command pip subprocess to install build dependencies 2026-10-16T06:15:54,392 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-10-16T06:15:54,834 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-16T06:15:54,857 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-16T06:15:56,656 Collecting setuptools>=64 2026-10-16T06:15:56,657 Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata 2026-10-16T06:15:56,670 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB) 2026-10-16T06:15:56,928 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-10-16T06:15:57,021 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB) 2026-10-16T06:15:59,792 Installing collected packages: setuptools 2026-10-16T06:16:02,048 Successfully installed setuptools-84.0.0 2026-10-16T06:16:02,317 Installing build dependencies: finished with status 'done' 2026-10-16T06:16:02,324 Getting requirements to build wheel: started 2026-10-16T06:16:02,325 Running command Getting requirements to build wheel 2026-10-16T06:16:03,053 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:03,054 !! 2026-10-16T06:16:03,055 ******************************************************************************** 2026-10-16T06:16:03,055 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:03,057 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:03,058 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:03,058 ******************************************************************************** 2026-10-16T06:16:03,059 !! 2026-10-16T06:16:03,060 dist._finalize_license_expression() 2026-10-16T06:16:03,060 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:03,061 !! 2026-10-16T06:16:03,062 ******************************************************************************** 2026-10-16T06:16:03,063 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:03,064 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:03,065 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:03,066 ******************************************************************************** 2026-10-16T06:16:03,067 !! 2026-10-16T06:16:03,068 self._finalize_license_expression() 2026-10-16T06:16:03,068 running egg_info 2026-10-16T06:16:03,072 writing varcode.egg-info/PKG-INFO 2026-10-16T06:16:03,077 writing dependency_links to varcode.egg-info/dependency_links.txt 2026-10-16T06:16:03,078 writing entry points to varcode.egg-info/entry_points.txt 2026-10-16T06:16:03,081 writing requirements to varcode.egg-info/requires.txt 2026-10-16T06:16:03,082 writing top-level names to varcode.egg-info/top_level.txt 2026-10-16T06:16:03,113 reading manifest file 'varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:03,128 reading manifest template 'MANIFEST.in' 2026-10-16T06:16:03,252 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-10-16T06:16:03,252 adding license file 'LICENSE' 2026-10-16T06:16:03,268 writing manifest file 'varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:03,367 Getting requirements to build wheel: finished with status 'done' 2026-10-16T06:16:03,370 Created temporary directory: /tmp/pip-modern-metadata-cb97_8nx 2026-10-16T06:16:03,373 Preparing metadata (pyproject.toml): started 2026-10-16T06:16:03,374 Running command Preparing metadata (pyproject.toml) 2026-10-16T06:16:04,014 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:04,015 !! 2026-10-16T06:16:04,016 ******************************************************************************** 2026-10-16T06:16:04,016 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:04,017 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:04,018 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:04,019 ******************************************************************************** 2026-10-16T06:16:04,020 !! 2026-10-16T06:16:04,020 dist._finalize_license_expression() 2026-10-16T06:16:04,021 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:04,022 !! 2026-10-16T06:16:04,023 ******************************************************************************** 2026-10-16T06:16:04,024 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:04,025 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:04,026 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:04,027 ******************************************************************************** 2026-10-16T06:16:04,028 !! 2026-10-16T06:16:04,029 self._finalize_license_expression() 2026-10-16T06:16:04,029 running dist_info 2026-10-16T06:16:04,038 creating /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info 2026-10-16T06:16:04,038 writing /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/PKG-INFO 2026-10-16T06:16:04,043 writing dependency_links to /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/dependency_links.txt 2026-10-16T06:16:04,045 writing entry points to /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/entry_points.txt 2026-10-16T06:16:04,048 writing requirements to /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/requires.txt 2026-10-16T06:16:04,049 writing top-level names to /tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/top_level.txt 2026-10-16T06:16:04,050 writing manifest file '/tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:04,078 reading manifest file '/tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:04,079 reading manifest template 'MANIFEST.in' 2026-10-16T06:16:04,200 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-10-16T06:16:04,201 adding license file 'LICENSE' 2026-10-16T06:16:04,214 writing manifest file '/tmp/pip-modern-metadata-cb97_8nx/varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:04,215 creating '/tmp/pip-modern-metadata-cb97_8nx/varcode-10.15.1.dist-info' 2026-10-16T06:16:04,341 Preparing metadata (pyproject.toml): finished with status 'done' 2026-10-16T06:16:04,346 Source in /tmp/pip-wheel-docqjq1e/varcode_089745f1c07a4c329dac93d7da11ba54 has version 10.15.1, which satisfies requirement varcode==10.15.1 from https://files.pythonhosted.org/packages/64/2e/2e6452282c063451bc9cce0d237c3ba1ec0edb7de417801cff694bfe3d66/varcode-10.15.1.tar.gz 2026-10-16T06:16:04,347 Removed varcode==10.15.1 from https://files.pythonhosted.org/packages/64/2e/2e6452282c063451bc9cce0d237c3ba1ec0edb7de417801cff694bfe3d66/varcode-10.15.1.tar.gz from build tracker '/tmp/pip-build-tracker-j4mnzc2n' 2026-10-16T06:16:04,352 Created temporary directory: /tmp/pip-unpack-k4fxb01s 2026-10-16T06:16:04,353 Building wheels for collected packages: varcode 2026-10-16T06:16:04,357 Created temporary directory: /tmp/pip-wheel-8ycbmo0a 2026-10-16T06:16:04,357 Destination directory: /tmp/pip-wheel-8ycbmo0a 2026-10-16T06:16:04,359 Building wheel for varcode (pyproject.toml): started 2026-10-16T06:16:04,360 Running command Building wheel for varcode (pyproject.toml) 2026-10-16T06:16:05,021 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:05,021 !! 2026-10-16T06:16:05,022 ******************************************************************************** 2026-10-16T06:16:05,023 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:05,024 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:05,025 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:05,025 ******************************************************************************** 2026-10-16T06:16:05,027 !! 2026-10-16T06:16:05,027 dist._finalize_license_expression() 2026-10-16T06:16:05,028 /tmp/pip-build-env-rol799zr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-16T06:16:05,029 !! 2026-10-16T06:16:05,030 ******************************************************************************** 2026-10-16T06:16:05,031 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-16T06:16:05,032 License :: OSI Approved :: Apache Software License 2026-10-16T06:16:05,033 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-16T06:16:05,034 ******************************************************************************** 2026-10-16T06:16:05,035 !! 2026-10-16T06:16:05,035 self._finalize_license_expression() 2026-10-16T06:16:05,036 running bdist_wheel 2026-10-16T06:16:05,049 running build 2026-10-16T06:16:05,049 running build_py 2026-10-16T06:16:05,057 creating build/lib/varcode 2026-10-16T06:16:05,059 copying varcode/reference.py -> build/lib/varcode 2026-10-16T06:16:05,062 copying varcode/genome.py -> build/lib/varcode 2026-10-16T06:16:05,065 copying varcode/vcf_parsing.py -> build/lib/varcode 2026-10-16T06:16:05,068 copying varcode/mutant_transcript.py -> build/lib/varcode 2026-10-16T06:16:05,071 copying varcode/extra_orfs.py -> build/lib/varcode 2026-10-16T06:16:05,073 copying varcode/_sample_vcf.py -> build/lib/varcode 2026-10-16T06:16:05,075 copying varcode/sv_allele_parser.py -> build/lib/varcode 2026-10-16T06:16:05,078 copying varcode/germline.py -> build/lib/varcode 2026-10-16T06:16:05,081 copying varcode/util.py -> build/lib/varcode 2026-10-16T06:16:05,083 copying varcode/cryptic_exons.py -> build/lib/varcode 2026-10-16T06:16:05,086 copying varcode/phasing.py -> build/lib/varcode 2026-10-16T06:16:05,088 copying varcode/uorf.py -> build/lib/varcode 2026-10-16T06:16:05,090 copying varcode/version.py -> build/lib/varcode 2026-10-16T06:16:05,091 copying varcode/__init__.py -> build/lib/varcode 2026-10-16T06:16:05,094 copying varcode/csv_helpers.py -> build/lib/varcode 2026-10-16T06:16:05,096 copying varcode/common.py -> build/lib/varcode 2026-10-16T06:16:05,098 copying varcode/vcf_output.py -> build/lib/varcode 2026-10-16T06:16:05,100 copying varcode/nucleotides.py -> build/lib/varcode 2026-10-16T06:16:05,102 copying varcode/transcript_model.py -> build/lib/varcode 2026-10-16T06:16:05,105 copying varcode/maf.py -> build/lib/varcode 2026-10-16T06:16:05,107 copying varcode/variant.py -> build/lib/varcode 2026-10-16T06:16:05,110 copying varcode/ucsc_reference_names.py -> build/lib/varcode 2026-10-16T06:16:05,111 copying varcode/realized_effects.py -> build/lib/varcode 2026-10-16T06:16:05,113 copying varcode/genome_sequence.py -> build/lib/varcode 2026-10-16T06:16:05,115 copying varcode/rna_evidence.py -> build/lib/varcode 2026-10-16T06:16:05,118 copying varcode/variant_collection.py -> build/lib/varcode 2026-10-16T06:16:05,120 copying varcode/splice_outcomes.py -> build/lib/varcode 2026-10-16T06:16:05,123 copying varcode/effect_candidates.py -> build/lib/varcode 2026-10-16T06:16:05,126 copying varcode/rna_read_phasing.py -> build/lib/varcode 2026-10-16T06:16:05,128 copying varcode/exacto.py -> build/lib/varcode 2026-10-16T06:16:05,131 copying varcode/structural_variant.py -> build/lib/varcode 2026-10-16T06:16:05,133 copying varcode/sample_identity.py -> build/lib/varcode 2026-10-16T06:16:05,136 copying varcode/vcf.py -> build/lib/varcode 2026-10-16T06:16:05,139 copying varcode/transcript_layout.py -> build/lib/varcode 2026-10-16T06:16:05,142 copying varcode/orf.py -> build/lib/varcode 2026-10-16T06:16:05,145 copying varcode/genomic_layout.py -> build/lib/varcode 2026-10-16T06:16:05,148 copying varcode/string_helpers.py -> build/lib/varcode 2026-10-16T06:16:05,151 copying varcode/reference_completion.py -> build/lib/varcode 2026-10-16T06:16:05,153 copying varcode/effect_hypotheses.py -> build/lib/varcode 2026-10-16T06:16:05,156 copying varcode/splice_graph.py -> build/lib/varcode 2026-10-16T06:16:05,159 copying varcode/genotype.py -> build/lib/varcode 2026-10-16T06:16:05,161 copying varcode/errors.py -> build/lib/varcode 2026-10-16T06:16:05,163 copying varcode/sv_comparison.py -> build/lib/varcode 2026-10-16T06:16:05,166 creating build/lib/varcode/cli 2026-10-16T06:16:05,167 copying varcode/cli/genes_script.py -> build/lib/varcode/cli 2026-10-16T06:16:05,169 copying varcode/cli/variant_args.py -> build/lib/varcode/cli 2026-10-16T06:16:05,171 copying varcode/cli/sample_checks.py -> build/lib/varcode/cli 2026-10-16T06:16:05,173 copying varcode/cli/__init__.py -> build/lib/varcode/cli 2026-10-16T06:16:05,175 copying varcode/cli/main.py -> build/lib/varcode/cli 2026-10-16T06:16:05,177 copying varcode/cli/version_info.py -> build/lib/varcode/cli 2026-10-16T06:16:05,178 copying varcode/cli/effects_script.py -> build/lib/varcode/cli 2026-10-16T06:16:05,181 creating build/lib/varcode/transforms 2026-10-16T06:16:05,182 copying varcode/transforms/__init__.py -> build/lib/varcode/transforms 2026-10-16T06:16:05,185 creating build/lib/varcode/annotators 2026-10-16T06:16:05,186 copying varcode/annotators/protein_diff.py -> build/lib/varcode/annotators 2026-10-16T06:16:05,189 copying varcode/annotators/__init__.py -> build/lib/varcode/annotators 2026-10-16T06:16:05,191 copying varcode/annotators/fast.py -> build/lib/varcode/annotators 2026-10-16T06:16:05,193 copying varcode/annotators/registry.py -> build/lib/varcode/annotators 2026-10-16T06:16:05,196 creating build/lib/varcode/effects 2026-10-16T06:16:05,197 copying varcode/effects/effect_prediction_coding.py -> build/lib/varcode/effects 2026-10-16T06:16:05,199 copying varcode/effects/effect_classes.py -> build/lib/varcode/effects 2026-10-16T06:16:05,203 copying varcode/effects/selenocysteine.py -> build/lib/varcode/effects 2026-10-16T06:16:05,205 copying varcode/effects/effect_helpers.py -> build/lib/varcode/effects 2026-10-16T06:16:05,207 copying varcode/effects/fast_path.py -> build/lib/varcode/effects 2026-10-16T06:16:05,210 copying varcode/effects/structural.py -> build/lib/varcode/effects 2026-10-16T06:16:05,212 copying varcode/effects/effect_ordering.py -> build/lib/varcode/effects 2026-10-16T06:16:05,215 copying varcode/effects/effect_collection.py -> build/lib/varcode/effects 2026-10-16T06:16:05,218 copying varcode/effects/__init__.py -> build/lib/varcode/effects 2026-10-16T06:16:05,219 copying varcode/effects/transcript_helpers.py -> build/lib/varcode/effects 2026-10-16T06:16:05,221 copying varcode/effects/sequence_change.py -> build/lib/varcode/effects 2026-10-16T06:16:05,224 copying varcode/effects/effect_prediction_coding_in_frame.py -> build/lib/varcode/effects 2026-10-16T06:16:05,226 copying varcode/effects/common.py -> build/lib/varcode/effects 2026-10-16T06:16:05,228 copying varcode/effects/mutate.py -> build/lib/varcode/effects 2026-10-16T06:16:05,229 copying varcode/effects/translate.py -> build/lib/varcode/effects 2026-10-16T06:16:05,231 copying varcode/effects/effect_prediction.py -> build/lib/varcode/effects 2026-10-16T06:16:05,234 copying varcode/effects/codon_tables.py -> build/lib/varcode/effects 2026-10-16T06:16:05,236 copying varcode/effects/classify.py -> build/lib/varcode/effects 2026-10-16T06:16:05,238 copying varcode/effects/effect_prediction_coding_frameshift.py -> build/lib/varcode/effects 2026-10-16T06:16:05,241 copying varcode/effects/structural_serialization.py -> build/lib/varcode/effects 2026-10-16T06:16:05,243 running egg_info 2026-10-16T06:16:05,252 writing varcode.egg-info/PKG-INFO 2026-10-16T06:16:05,257 writing dependency_links to varcode.egg-info/dependency_links.txt 2026-10-16T06:16:05,258 writing entry points to varcode.egg-info/entry_points.txt 2026-10-16T06:16:05,261 writing requirements to varcode.egg-info/requires.txt 2026-10-16T06:16:05,262 writing top-level names to varcode.egg-info/top_level.txt 2026-10-16T06:16:05,280 reading manifest file 'varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:05,295 reading manifest template 'MANIFEST.in' 2026-10-16T06:16:05,417 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-10-16T06:16:05,417 adding license file 'LICENSE' 2026-10-16T06:16:05,432 writing manifest file 'varcode.egg-info/SOURCES.txt' 2026-10-16T06:16:05,441 copying varcode/cli/logging.conf -> build/lib/varcode/cli 2026-10-16T06:16:05,455 installing to build/bdist.linux-armv7l/wheel 2026-10-16T06:16:05,456 running install 2026-10-16T06:16:05,478 running install_lib 2026-10-16T06:16:05,483 creating build/bdist.linux-armv7l/wheel 2026-10-16T06:16:05,486 creating build/bdist.linux-armv7l/wheel/varcode 2026-10-16T06:16:05,488 creating build/bdist.linux-armv7l/wheel/varcode/cli 2026-10-16T06:16:05,489 copying build/lib/varcode/cli/genes_script.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,491 copying build/lib/varcode/cli/variant_args.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,493 copying build/lib/varcode/cli/sample_checks.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,495 copying build/lib/varcode/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,497 copying build/lib/varcode/cli/main.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,499 copying build/lib/varcode/cli/version_info.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,501 copying build/lib/varcode/cli/logging.conf -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,503 copying build/lib/varcode/cli/effects_script.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-10-16T06:16:05,504 copying build/lib/varcode/reference.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,507 copying build/lib/varcode/genome.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,509 copying build/lib/varcode/vcf_parsing.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,511 copying build/lib/varcode/mutant_transcript.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,514 creating build/bdist.linux-armv7l/wheel/varcode/transforms 2026-10-16T06:16:05,515 copying build/lib/varcode/transforms/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/transforms 2026-10-16T06:16:05,518 copying build/lib/varcode/extra_orfs.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,520 copying build/lib/varcode/_sample_vcf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,522 copying build/lib/varcode/sv_allele_parser.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,524 copying build/lib/varcode/germline.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,527 copying build/lib/varcode/util.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,530 creating build/bdist.linux-armv7l/wheel/varcode/annotators 2026-10-16T06:16:05,531 copying build/lib/varcode/annotators/protein_diff.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-10-16T06:16:05,533 copying build/lib/varcode/annotators/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-10-16T06:16:05,535 copying build/lib/varcode/annotators/fast.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-10-16T06:16:05,537 copying build/lib/varcode/annotators/registry.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-10-16T06:16:05,539 copying build/lib/varcode/cryptic_exons.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,542 copying build/lib/varcode/phasing.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,545 copying build/lib/varcode/uorf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,546 copying build/lib/varcode/version.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,548 copying build/lib/varcode/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,550 copying build/lib/varcode/csv_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,552 copying build/lib/varcode/common.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,554 copying build/lib/varcode/vcf_output.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,557 copying build/lib/varcode/nucleotides.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,558 copying build/lib/varcode/transcript_model.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,561 copying build/lib/varcode/maf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,563 copying build/lib/varcode/variant.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,566 copying build/lib/varcode/ucsc_reference_names.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,568 copying build/lib/varcode/realized_effects.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,569 copying build/lib/varcode/genome_sequence.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,572 copying build/lib/varcode/rna_evidence.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,574 copying build/lib/varcode/variant_collection.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,577 copying build/lib/varcode/splice_outcomes.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,580 copying build/lib/varcode/effect_candidates.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,582 copying build/lib/varcode/rna_read_phasing.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,585 copying build/lib/varcode/exacto.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,588 copying build/lib/varcode/structural_variant.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,590 copying build/lib/varcode/sample_identity.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,593 copying build/lib/varcode/vcf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,595 copying build/lib/varcode/transcript_layout.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,597 copying build/lib/varcode/orf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,600 copying build/lib/varcode/genomic_layout.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,602 copying build/lib/varcode/string_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,604 copying build/lib/varcode/reference_completion.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,607 copying build/lib/varcode/effect_hypotheses.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,609 copying build/lib/varcode/splice_graph.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,612 creating build/bdist.linux-armv7l/wheel/varcode/effects 2026-10-16T06:16:05,613 copying build/lib/varcode/effects/effect_prediction_coding.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,615 copying build/lib/varcode/effects/effect_classes.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,618 copying build/lib/varcode/effects/selenocysteine.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,621 copying build/lib/varcode/effects/effect_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,623 copying build/lib/varcode/effects/fast_path.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,625 copying build/lib/varcode/effects/structural.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,628 copying build/lib/varcode/effects/effect_ordering.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,630 copying build/lib/varcode/effects/effect_collection.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,633 copying build/lib/varcode/effects/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,635 copying build/lib/varcode/effects/transcript_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,637 copying build/lib/varcode/effects/sequence_change.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,639 copying build/lib/varcode/effects/effect_prediction_coding_in_frame.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,641 copying build/lib/varcode/effects/common.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,643 copying build/lib/varcode/effects/mutate.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,645 copying build/lib/varcode/effects/translate.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,647 copying build/lib/varcode/effects/effect_prediction.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,650 copying build/lib/varcode/effects/codon_tables.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,652 copying build/lib/varcode/effects/classify.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,654 copying build/lib/varcode/effects/effect_prediction_coding_frameshift.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,656 copying build/lib/varcode/effects/structural_serialization.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-10-16T06:16:05,659 copying build/lib/varcode/genotype.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,661 copying build/lib/varcode/errors.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,663 copying build/lib/varcode/sv_comparison.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-10-16T06:16:05,665 running install_egg_info 2026-10-16T06:16:05,670 Copying varcode.egg-info to build/bdist.linux-armv7l/wheel/./varcode-10.15.1-py3.11.egg-info 2026-10-16T06:16:05,682 running install_scripts 2026-10-16T06:16:05,694 creating build/bdist.linux-armv7l/wheel/varcode-10.15.1.dist-info/WHEEL 2026-10-16T06:16:05,696 creating '/tmp/pip-wheel-8ycbmo0a/.tmp-69c0cnz6/varcode-10.15.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-10-16T06:16:05,700 adding 'varcode/__init__.py' 2026-10-16T06:16:05,702 adding 'varcode/_sample_vcf.py' 2026-10-16T06:16:05,704 adding 'varcode/common.py' 2026-10-16T06:16:05,707 adding 'varcode/cryptic_exons.py' 2026-10-16T06:16:05,709 adding 'varcode/csv_helpers.py' 2026-10-16T06:16:05,710 adding 'varcode/effect_candidates.py' 2026-10-16T06:16:05,712 adding 'varcode/effect_hypotheses.py' 2026-10-16T06:16:05,714 adding 'varcode/errors.py' 2026-10-16T06:16:05,717 adding 'varcode/exacto.py' 2026-10-16T06:16:05,719 adding 'varcode/extra_orfs.py' 2026-10-16T06:16:05,721 adding 'varcode/genome.py' 2026-10-16T06:16:05,724 adding 'varcode/genome_sequence.py' 2026-10-16T06:16:05,727 adding 'varcode/genomic_layout.py' 2026-10-16T06:16:05,729 adding 'varcode/genotype.py' 2026-10-16T06:16:05,736 adding 'varcode/germline.py' 2026-10-16T06:16:05,738 adding 'varcode/maf.py' 2026-10-16T06:16:05,741 adding 'varcode/mutant_transcript.py' 2026-10-16T06:16:05,743 adding 'varcode/nucleotides.py' 2026-10-16T06:16:05,747 adding 'varcode/orf.py' 2026-10-16T06:16:05,750 adding 'varcode/phasing.py' 2026-10-16T06:16:05,751 adding 'varcode/realized_effects.py' 2026-10-16T06:16:05,754 adding 'varcode/reference.py' 2026-10-16T06:16:05,756 adding 'varcode/reference_completion.py' 2026-10-16T06:16:05,759 adding 'varcode/rna_evidence.py' 2026-10-16T06:16:05,762 adding 'varcode/rna_read_phasing.py' 2026-10-16T06:16:05,765 adding 'varcode/sample_identity.py' 2026-10-16T06:16:05,767 adding 'varcode/splice_graph.py' 2026-10-16T06:16:05,775 adding 'varcode/splice_outcomes.py' 2026-10-16T06:16:05,777 adding 'varcode/string_helpers.py' 2026-10-16T06:16:05,781 adding 'varcode/structural_variant.py' 2026-10-16T06:16:05,783 adding 'varcode/sv_allele_parser.py' 2026-10-16T06:16:05,785 adding 'varcode/sv_comparison.py' 2026-10-16T06:16:05,788 adding 'varcode/transcript_layout.py' 2026-10-16T06:16:05,791 adding 'varcode/transcript_model.py' 2026-10-16T06:16:05,792 adding 'varcode/ucsc_reference_names.py' 2026-10-16T06:16:05,794 adding 'varcode/uorf.py' 2026-10-16T06:16:05,795 adding 'varcode/util.py' 2026-10-16T06:16:05,798 adding 'varcode/variant.py' 2026-10-16T06:16:05,803 adding 'varcode/variant_collection.py' 2026-10-16T06:16:05,806 adding 'varcode/vcf.py' 2026-10-16T06:16:05,808 adding 'varcode/vcf_output.py' 2026-10-16T06:16:05,810 adding 'varcode/vcf_parsing.py' 2026-10-16T06:16:05,811 adding 'varcode/version.py' 2026-10-16T06:16:05,813 adding 'varcode/annotators/__init__.py' 2026-10-16T06:16:05,815 adding 'varcode/annotators/fast.py' 2026-10-16T06:16:05,817 adding 'varcode/annotators/protein_diff.py' 2026-10-16T06:16:05,818 adding 'varcode/annotators/registry.py' 2026-10-16T06:16:05,820 adding 'varcode/cli/__init__.py' 2026-10-16T06:16:05,821 adding 'varcode/cli/effects_script.py' 2026-10-16T06:16:05,823 adding 'varcode/cli/genes_script.py' 2026-10-16T06:16:05,824 adding 'varcode/cli/logging.conf' 2026-10-16T06:16:05,825 adding 'varcode/cli/main.py' 2026-10-16T06:16:05,827 adding 'varcode/cli/sample_checks.py' 2026-10-16T06:16:05,828 adding 'varcode/cli/variant_args.py' 2026-10-16T06:16:05,830 adding 'varcode/cli/version_info.py' 2026-10-16T06:16:05,832 adding 'varcode/effects/__init__.py' 2026-10-16T06:16:05,834 adding 'varcode/effects/classify.py' 2026-10-16T06:16:05,835 adding 'varcode/effects/codon_tables.py' 2026-10-16T06:16:05,837 adding 'varcode/effects/common.py' 2026-10-16T06:16:05,847 adding 'varcode/effects/effect_classes.py' 2026-10-16T06:16:05,850 adding 'varcode/effects/effect_collection.py' 2026-10-16T06:16:05,861 adding 'varcode/effects/effect_helpers.py' 2026-10-16T06:16:05,864 adding 'varcode/effects/effect_ordering.py' 2026-10-16T06:16:05,867 adding 'varcode/effects/effect_prediction.py' 2026-10-16T06:16:05,869 adding 'varcode/effects/effect_prediction_coding.py' 2026-10-16T06:16:05,870 adding 'varcode/effects/effect_prediction_coding_frameshift.py' 2026-10-16T06:16:05,873 adding 'varcode/effects/effect_prediction_coding_in_frame.py' 2026-10-16T06:16:05,874 adding 'varcode/effects/fast_path.py' 2026-10-16T06:16:05,876 adding 'varcode/effects/mutate.py' 2026-10-16T06:16:05,877 adding 'varcode/effects/selenocysteine.py' 2026-10-16T06:16:05,880 adding 'varcode/effects/sequence_change.py' 2026-10-16T06:16:05,887 adding 'varcode/effects/structural.py' 2026-10-16T06:16:05,888 adding 'varcode/effects/structural_serialization.py' 2026-10-16T06:16:05,890 adding 'varcode/effects/transcript_helpers.py' 2026-10-16T06:16:05,892 adding 'varcode/effects/translate.py' 2026-10-16T06:16:05,896 adding 'varcode/transforms/__init__.py' 2026-10-16T06:16:05,899 adding 'varcode-10.15.1.dist-info/licenses/LICENSE' 2026-10-16T06:16:05,901 adding 'varcode-10.15.1.dist-info/METADATA' 2026-10-16T06:16:05,902 adding 'varcode-10.15.1.dist-info/WHEEL' 2026-10-16T06:16:05,903 adding 'varcode-10.15.1.dist-info/entry_points.txt' 2026-10-16T06:16:05,904 adding 'varcode-10.15.1.dist-info/top_level.txt' 2026-10-16T06:16:05,906 adding 'varcode-10.15.1.dist-info/RECORD' 2026-10-16T06:16:05,911 removing build/bdist.linux-armv7l/wheel 2026-10-16T06:16:06,029 Building wheel for varcode (pyproject.toml): finished with status 'done' 2026-10-16T06:16:06,040 Created wheel for varcode: filename=varcode-10.15.1-py3-none-any.whl size=331845 sha256=3dd04027a03da8c4cd81fbdd8346eee6a6ac8dd428d987e12e12e12c344a2468 2026-10-16T06:16:06,041 Stored in directory: /tmp/pip-ephem-wheel-cache-hne0v7ti/wheels/df/a0/85/e8760fa9d880bad8f99c3cf7b2e3ebf10279c6e4af61902e4d 2026-10-16T06:16:06,054 Successfully built varcode 2026-10-16T06:16:06,065 Removed build tracker: '/tmp/pip-build-tracker-j4mnzc2n'