2026-10-16T22:34:02,946 Created temporary directory: /tmp/pip-ephem-wheel-cache-w560uvie
2026-10-16T22:34:02,947 Created temporary directory: /tmp/pip-build-tracker-4v224qou
2026-10-16T22:34:02,948 Initialized build tracking at /tmp/pip-build-tracker-4v224qou
2026-10-16T22:34:02,949 Created build tracker: /tmp/pip-build-tracker-4v224qou
2026-10-16T22:34:02,949 Entered build tracker: /tmp/pip-build-tracker-4v224qou
2026-10-16T22:34:02,950 Created temporary directory: /tmp/pip-wheel-ei1ctdm9
2026-10-16T22:34:02,953 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-16T22:34:02,955 Created temporary directory: /tmp/pip-ephem-wheel-cache-912rhrhx
2026-10-16T22:34:02,976 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-16T22:34:02,980 2 location(s) to search for versions of oncoref:
2026-10-16T22:34:02,980 * https://pypi.org/simple/oncoref/
2026-10-16T22:34:02,980 * https://www.piwheels.org/simple/oncoref/
2026-10-16T22:34:02,981 Fetching project page and analyzing links: https://pypi.org/simple/oncoref/
2026-10-16T22:34:02,981 Getting page https://pypi.org/simple/oncoref/
2026-10-16T22:34:02,983 Found index url https://pypi.org/simple
2026-10-16T22:34:03,201 Fetched page https://pypi.org/simple/oncoref/ as application/vnd.pypi.simple.v1+json
2026-10-16T22:34:03,274   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/28/98/3c08853ca8c6e4f7ea1625192d883f4890b4482814b60c92972610af6a91/oncoref-1.6.0-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,275   Found link https://files.pythonhosted.org/packages/d3/fa/b1f2479c8c9b44597623ab898f37be9f1c317250cac13115edb09adf0bd0/oncoref-1.6.0.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.6.0
2026-10-16T22:34:03,276   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/00/bc/d076f0b5f3ab5d26840cd8eee073af59210bb90aba8a7826d64980c08e70/oncoref-1.7.0-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,277   Found link https://files.pythonhosted.org/packages/6b/4f/2b9be7b2858be7ca1c850ea67261cfe41c9595b7d57ed818b20af88c815c/oncoref-1.7.0.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.7.0
2026-10-16T22:34:03,278   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/3d/cf/214dbe1e3f3ca56d6354d7f2f87283085238025685b7287be5a3020db87c/oncoref-1.8.0-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,279   Found link https://files.pythonhosted.org/packages/10/a1/9b3e573b2e9ce5903eef398c68d06cd3d1425a88c87c3f5d8dbe79cbfb3c/oncoref-1.8.0.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.0
2026-10-16T22:34:03,279   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/56/b4/103c9511736de31d6182b47aaf4f03da47c52933be96ea7a060ad7478ae3/oncoref-1.8.1-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,280   Found link https://files.pythonhosted.org/packages/21/3e/8080dbac7eaa58029775dd4937cb7dc70d1e65b52e358ccb75b5dd8ed63e/oncoref-1.8.1.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.1
2026-10-16T22:34:03,281   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/02/4f/03495de60734a5fb8a50476fd036af4b0262949e609827f759349cc1ff6b/oncoref-1.8.2-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,282   Found link https://files.pythonhosted.org/packages/e6/18/5ee9311af10f46d71490d6563884c80cb170f106e31164d3a2cf7e47d1e8/oncoref-1.8.2.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.2
2026-10-16T22:34:03,283   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/9b/4f/60a3e4e56d57a916f462597f08c5c4915e19cb97fc1cd0b85c110e41659e/oncoref-1.8.3-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,284   Found link https://files.pythonhosted.org/packages/e7/7d/22a2797b33413bfe0f46708f396b9b1f9ad9dbc253d94fcbeb6ccf9ad5ff/oncoref-1.8.3.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.3
2026-10-16T22:34:03,285   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/ca/bb/0981e424fd20641c70c1607dc7e707ff53036f90e7482b18ef4f2b100bba/oncoref-1.8.4-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,286   Found link https://files.pythonhosted.org/packages/da/8f/e45e879798fcad2b21996a64d69c0034e947ca8c07b2668b484580bcccd2/oncoref-1.8.4.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.4
2026-10-16T22:34:03,286   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/b8/72/7cb35a084c989d648fc0ef20be3c0b9d888092e0e13aabc75710797dfbbd/oncoref-1.8.5-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,287   Found link https://files.pythonhosted.org/packages/0a/e2/de65c5e1582fe009b3f640e94e6ecd5cf2f139d490750374cdad3af0e14c/oncoref-1.8.5.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.5
2026-10-16T22:34:03,288   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/71/92/3cd4d589831ccb90b12732347718e54d84097a6c780ced1810f52e3b302a/oncoref-1.8.6-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,289   Found link https://files.pythonhosted.org/packages/fe/29/0640ff92bcb51841b69a4d04ccf94a5173a18ee10c54786b959026ca4362/oncoref-1.8.6.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.6
2026-10-16T22:34:03,290   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/f2/29/f869b37c956b8836b9c9b45e89ab7dad98a93270e6bd395b45a7ca5657ad/oncoref-1.8.7-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,291   Found link https://files.pythonhosted.org/packages/62/2d/434129dfb4157eb2bf8c4f89ff3f5c74e65b2a62e619fcd1154388d70aa4/oncoref-1.8.7.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.7
2026-10-16T22:34:03,291   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/06/89/59174cc23b5ca908c5eed6c89f147d28265749466c702e7c45a91004c4d2/oncoref-1.8.8-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,293   Found link https://files.pythonhosted.org/packages/f4/fd/e8f16e540188ecdfa8d331e209374ed0c47ef44e27eae34fc4a262b6e49a/oncoref-1.8.8.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.8
2026-10-16T22:34:03,293   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/21/11/175fa74783a3e4662792af69e82e51a7a991e710858efaeb92a8695d8fda/oncoref-1.8.9-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,294   Found link https://files.pythonhosted.org/packages/9f/cb/7d81ce8e2dab2710860db8ae18d8f1c3a34052d74f01459afa76de5af686/oncoref-1.8.9.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.9
2026-10-16T22:34:03,295   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/f8/12/a1f0c9d212afc8cd24b0451f400a187bdd47f18e3cad7f29f2777550ae1a/oncoref-1.8.10-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,296   Found link https://files.pythonhosted.org/packages/77/61/378430e4677aa8b166ce384cbe1d113e10edaa5f59609a77f4c766be2571/oncoref-1.8.10.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.10
2026-10-16T22:34:03,297   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/b4/3d/c5e014ef25909aa0d1066921219dd488045d0d6b5016550231966030cf12/oncoref-1.8.11-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,298   Found link https://files.pythonhosted.org/packages/32/11/bd521deea2d84a375a14221e236bac5683bed470cccee72d352e054794e3/oncoref-1.8.11.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.11
2026-10-16T22:34:03,299   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/78/7b/c22cc3d95ab5b76edffb7cb157822e8af21bcb9f4b5558027675cd684cbf/oncoref-1.8.12-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,299   Found link https://files.pythonhosted.org/packages/d1/d9/ed6fbdf2ac825e2be372fbd326ca99009195e27aad5f2d597579a2aca8c4/oncoref-1.8.12.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.12
2026-10-16T22:34:03,300   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/5e/38/d4f824676b3d280e159182422711e46a9be12a1078869b3b3da846a959d6/oncoref-1.8.13-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,301   Found link https://files.pythonhosted.org/packages/53/53/a8ca36b70ca14b5654f882f5a6fec1709a385bc2cc18d4bde37a2f32d454/oncoref-1.8.13.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.13
2026-10-16T22:34:03,302   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/2f/c1/703bd890ae830651eae083a090278ba8254ac89bae1c0bfefed061c3e2eb/oncoref-1.8.14-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,303   Found link https://files.pythonhosted.org/packages/72/05/f82628c00d880f035d82572d1160a43c00ca2e7c45b010b4a9f300a5a863/oncoref-1.8.14.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.14
2026-10-16T22:34:03,303   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/ac/42/91b2b04455fb29d40afb47dc7ee2eae30218a24c4d540d95191d31f6f98e/oncoref-1.8.15-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,304   Found link https://files.pythonhosted.org/packages/26/8a/9cb4754077d37b89ed3ee3781cffdb03040d90286aaaedacba8cb238d7c3/oncoref-1.8.15.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.15
2026-10-16T22:34:03,305   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/53/3f/1af50bb6d208ada32a29b7e3ed29169932b97542b48e765c1d96130b7f3d/oncoref-1.8.16-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,306   Found link https://files.pythonhosted.org/packages/b0/d3/a5bd8fc8f94176955d736efbdd944f84c9b72fe55cb88580ba9ab8ed5e04/oncoref-1.8.16.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.16
2026-10-16T22:34:03,307   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/53/77/d24a0f29e452b83e5d6a1bfb366c72b8407bc7505d94280ca3ba609de07e/oncoref-1.8.17-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,308   Found link https://files.pythonhosted.org/packages/c1/e7/7f753f3a4b044b3f3bc8f75b75ef24df1c9b77d3f0742ee37fc243441830/oncoref-1.8.17.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.17
2026-10-16T22:34:03,308   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/04/55/5f2c1936263bdbe9a95a7c82d673eae8724b3eb1b99d4c1c33eadfc6edf5/oncoref-1.8.18-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,309   Found link https://files.pythonhosted.org/packages/3a/54/ceb46bd314647d4f44c1a83e06ca8c15118ca03c20b8111a3f2defb56c6c/oncoref-1.8.18.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.18
2026-10-16T22:34:03,310   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/07/35/638b350ebd4fd975c88adb9168c250b482cf549a77381cced479cdf3923f/oncoref-1.8.19-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,311   Found link https://files.pythonhosted.org/packages/39/5a/c1460247c124e495fc20ae3e76a760ee67da5f7263531a1093ae4cdc1983/oncoref-1.8.19.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.19
2026-10-16T22:34:03,312   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/eb/2d/584fe29a9ae1a336ec8dc1dadc08e60e036de296b703c428b69aafb97ee7/oncoref-1.8.20-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,313   Found link https://files.pythonhosted.org/packages/aa/5b/9be05673420aae6512388fb70ff3b3802ca0bca46179299c93e9bdea7cb1/oncoref-1.8.20.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.20
2026-10-16T22:34:03,313   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/c2/b8/d13577ba1cd9a054203201a66d94d70c8c71156e5afaf85c557c52a8a4c8/oncoref-1.8.21-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,314   Found link https://files.pythonhosted.org/packages/f6/9d/ca143333eade742f336f48670b06ee9849c2c31d9322c5c7bb6979a191a3/oncoref-1.8.21.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.21
2026-10-16T22:34:03,315   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/59/bd/c385a7916a14b417f607eecb73034e821165e8f650435947ecf8845c5161/oncoref-1.8.22-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,316   Found link https://files.pythonhosted.org/packages/a7/cc/f9b0c987a30c7928b99e165f2bd778a677eb1433eb0802911d6678139aeb/oncoref-1.8.22.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.22
2026-10-16T22:34:03,316   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/e7/f2/ae5d03f1bf678a753916310b281effcbc4cf19a4e0e6995437966ad6ac91/oncoref-1.8.23-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,317   Found link https://files.pythonhosted.org/packages/be/8c/f6a66a8ae2ba39778734de5548a77246995f30c636670ff2ca38094ff59e/oncoref-1.8.23.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.23
2026-10-16T22:34:03,318   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/28/8d/ca3b2c8c719845b8c38ff91118723bb2c965155ac0a49af2ff8ceff50a56/oncoref-1.8.24-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,319   Found link https://files.pythonhosted.org/packages/62/f6/e9a386e5a93bd80d065addcc4050fefd3bb6e8b55b75ea3ba88025f95255/oncoref-1.8.24.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.24
2026-10-16T22:34:03,320   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/8d/48/dd730548afc982ad049e59c8084f8847a0c49e3d0e288d7b0c299abdad9b/oncoref-1.8.25-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,321   Found link https://files.pythonhosted.org/packages/fe/48/42ff82844f2c14e04799c0441651a2c9b147da3707e4924129d0352b5525/oncoref-1.8.25.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.25
2026-10-16T22:34:03,321   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/15/fc/76fa123a1303b6db49cade8bf9985e206e992b14ad3d49b446acf8ee9516/oncoref-1.8.26-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,322   Found link https://files.pythonhosted.org/packages/e7/5c/785ef9ba1884cb96cc5c5bb24da2b2b7d5836404cefa2cc6b9589707d264/oncoref-1.8.26.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.26
2026-10-16T22:34:03,323   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/1f/6e/9d45c29e74006d28dd4da8b329a4b939dd7bfa89496792f969392734b44a/oncoref-1.8.27-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,324   Found link https://files.pythonhosted.org/packages/b1/35/566b316d8325fc6cf07c3cb72c7432a37302396da59a1b78dbd75c3c8e2b/oncoref-1.8.27.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.27
2026-10-16T22:34:03,325   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/97/00/35532e9bdea879c0aa0ccabcdb2cd219ebb85a68b2217df7ba7b4e690ae7/oncoref-1.8.28-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,428   Found link https://files.pythonhosted.org/packages/a1/0f/74bcf460f43a06ce5d7692076631964bd9820459dedc33395467743a63f3/oncoref-1.8.92.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.92
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2026-10-16T22:34:03,445   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/b5/03/21fe9fa15d5c25d6f20885cdce6330d17e4264c8bfd65d26b295fde3da54/oncoref-1.8.103-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,546   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/cf/4e/b6ce9dcf774f40118c9e05cc7b147265dad44b810f2307a51c2f4a14c39e/oncoref-1.8.167-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,557   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/b3/5d/ac887ec898d1374f8fb6918da1907e0e792f6fc818535582d91cdb7b40ab/oncoref-1.8.174-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,579   Found link https://files.pythonhosted.org/packages/e3/51/c221748b84c9d418ec1bbce129cec420b59beb926113de2ae9b4aebfc545/oncoref-1.8.190.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.190
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2026-10-16T22:34:03,581   Found link https://files.pythonhosted.org/packages/32/da/a3d962778f46d11b4fb51a867f58486442c978692f353dda1dc4986f1196/oncoref-1.8.191.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.191
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2026-10-16T22:34:03,582   Found link https://files.pythonhosted.org/packages/cd/3d/9c8fdfc37482c3be0e45850f23349c4a06f00f84deeae8c678dd755d4669/oncoref-1.8.192.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.192
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2026-10-16T22:34:03,584   Found link https://files.pythonhosted.org/packages/45/47/34e74e94b60afcec5721252f696952513f87bac26f905b97d10d0d454df5/oncoref-1.8.193.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.193
2026-10-16T22:34:03,584   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/b1/d4/44b7f425ebe037e4ab35bad856a0cab4dc3a5bf8a3ec5eac933dd0e91135/oncoref-1.8.194-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,589   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/c2/12/70634148a26010aec1dc8871fe98ce5b3baea198ab3a40595b6f53ed146c/oncoref-1.8.197-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,591   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/bc/0e/ac05d87c3eb15bd807df3373807005a9768ba53bbb881e064dd9bd339f76/oncoref-1.8.198-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,591   Found link https://files.pythonhosted.org/packages/7a/89/3101c2a03a75c122e49b4ebb724f9921ba8ba98ed413dbaa941e550aa8c5/oncoref-1.8.198.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.198
2026-10-16T22:34:03,592   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/a8/2c/da366c18febecdd1dac94cb8177e965a320b198f6408995efd4720be0367/oncoref-1.8.199-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,594   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/75/7c/0d3782f7829aaf18931b6e79523915022713e7a796e0225653e9fc968c35/oncoref-1.8.200-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,595   Found link https://files.pythonhosted.org/packages/69/4c/ce5b15fdd6d1d7f6ddae761fc76752e8d7b75407bd2aea3e415ce5a9ad07/oncoref-1.8.200.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.200
2026-10-16T22:34:03,595   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/ce/bb/17dbac59544cf01ec41e3e741e19c8393529f456cf391471e45757710d20/oncoref-1.8.201-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,596   Found link https://files.pythonhosted.org/packages/6e/d7/84f2e7ca3d795ec3a70d5e105172935ed507707e8c58dbd18b2181137dfa/oncoref-1.8.201.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.201
2026-10-16T22:34:03,597   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/78/8a/9b7e3e566051e0774a45b5fe8c24daef4d0b9ea03cf814300d144dd8c497/oncoref-1.8.204-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,598   Found link https://files.pythonhosted.org/packages/e6/e0/b37a0bcb1cb008b6aef63e12c7cbd8db5a3a4ea7284989490ed349b434a8/oncoref-1.8.204.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.204
2026-10-16T22:34:03,598   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/ff/4a/215b3113491734ca038d4a84841e98bcae1af7d6eba03adbc3a12fffe600/oncoref-1.8.205-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,599   Found link https://files.pythonhosted.org/packages/b5/68/b227722897482ac9d7c7973904f110f7e7abd33b5a44c69406d682ffa0da/oncoref-1.8.205.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.205
2026-10-16T22:34:03,600   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/6e/cc/3427ed4152c9eb2c3abd3ff3c1f4a0d920157189190d11b6269128853524/oncoref-1.8.206-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,601   Found link https://files.pythonhosted.org/packages/da/39/2c9b34e0a628855343ea535bf691e0118115b873a7f7851f0bcf3ca64ddc/oncoref-1.8.206.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.206
2026-10-16T22:34:03,602   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/09/9a/26929cf6e4428e52063cc3e6306c7c66f4eaac1f36b92b5cbd32fd6de826/oncoref-1.8.207-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,603   Found link https://files.pythonhosted.org/packages/0f/95/c748a4ef02f78c50bdd43ce795ae6da4ea7ee0c20acf1ff92afc6cbd42c0/oncoref-1.8.207.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.207
2026-10-16T22:34:03,603   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/10/b9/2dddec9efc25bba7b2244cb40c5e66cd75d03e8a5bace70db039629424ae/oncoref-1.8.208-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,604   Found link https://files.pythonhosted.org/packages/4e/b8/7f0c2fe248f2285d8d75061270cd614686449bc3940fd6a4c81a6959ec92/oncoref-1.8.208.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.208
2026-10-16T22:34:03,605   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/d3/15/ecc50e1861ac65e28d05a7415f814b586570f2381f1eea0b7bf371c4cf19/oncoref-1.8.209-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,606   Found link https://files.pythonhosted.org/packages/5d/7a/63c5df3a8510cb512956b586cfe79b4f1d9a7af595b7a738db5bb13e0598/oncoref-1.8.209.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.209
2026-10-16T22:34:03,607   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/f4/92/d94502b8bc3ae81b177c206c795d22683cd3142036acc0363ffa11de2b1c/oncoref-1.8.210-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,607   Found link https://files.pythonhosted.org/packages/00/cf/169ae55f7616a68e221a6d6880315108afc2a2216e8d5722e87609281ba3/oncoref-1.8.210.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.210
2026-10-16T22:34:03,608   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/cd/0c/5981a7fa5719c4f29cba29ed2f5685afe2952c2beb35593fc8c3d4f1bfa7/oncoref-1.8.211-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,609   Found link https://files.pythonhosted.org/packages/59/5b/cf059d93ae4bd1be42e46548dc8ad9aeefbbc5de2b00c819d3ed25cebefd/oncoref-1.8.211.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.8.211
2026-10-16T22:34:03,609   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/00/cb/d849b4b225c2d3b0529c9fd73ab7b89c0305364c07c52f3c5c7de4dc668c/oncoref-1.9.9-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,610   Found link https://files.pythonhosted.org/packages/1c/f4/2781578378b4c87bb02a3aa3b6b74ef1bac485280f60d9137c77c3eaf392/oncoref-1.9.9.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.9.9
2026-10-16T22:34:03,611   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/5b/93/1d080bfc0f60c1b761a02c3d77d3953393b7f953841c14ee8b645959d9bf/oncoref-1.9.10-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,612   Found link https://files.pythonhosted.org/packages/88/c8/c3a2d597fe775a4c89a8f7c03cfc122c572640f04570a8906a608b1ca189/oncoref-1.9.10.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.9), version: 1.9.10
2026-10-16T22:34:03,613   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/8c/2e/903bda83493f0c409aa207597dae2aa88b368d5020eb54edabc4cbfc32e1/oncoref-1.9.11-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10)
2026-10-16T22:34:03,614   Found link https://files.pythonhosted.org/packages/68/94/195140e0421e53c665fbd599923777a87ddf95a5e7a93472919e0f12737f/oncoref-1.9.11.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10), version: 1.9.11
2026-10-16T22:34:03,614   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/af/9c/d8750a60e04b06297bdddc0dbea9cc89897f40776d591d7cca88ef2df3f0/oncoref-1.9.12-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10)
2026-10-16T22:34:03,615   Found link https://files.pythonhosted.org/packages/4a/3f/8ef61eda36afc27d13f825df7caeec6f3101fc74b55d1bf793b494b9d38f/oncoref-1.9.12.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10), version: 1.9.12
2026-10-16T22:34:03,616   Skipping link: No binaries permitted for oncoref: https://files.pythonhosted.org/packages/63/09/5cc898aff0ada57102fc0671f20ff61791329b1ec247be48cf618654a3f0/oncoref-1.9.13-py3-none-any.whl (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10)
2026-10-16T22:34:03,617   Found link https://files.pythonhosted.org/packages/9f/af/64bf0c227b75a680e23672046f8f6781813eb9399c27206bc041a842b491/oncoref-1.9.13.tar.gz (from https://pypi.org/simple/oncoref/) (requires-python:>=3.10), version: 1.9.13
2026-10-16T22:34:03,618 Fetching project page and analyzing links: https://www.piwheels.org/simple/oncoref/
2026-10-16T22:34:03,619 Getting page https://www.piwheels.org/simple/oncoref/
2026-10-16T22:34:03,620 Found index url https://www.piwheels.org/simple
2026-10-16T22:34:03,818 Fetched page https://www.piwheels.org/simple/oncoref/ as text/html
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2026-10-16T22:34:03,877   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.9.10-py3-none-any.whl#sha256=e387319bddc94351951a47a6911fb9480c47805fdd43ee28e3c11305de100e1c (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,877   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.9.9-py3-none-any.whl#sha256=7054ad15a89a4df1ef892a15992796d22846a791ec3905c2a5c995d0437de12b (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,878   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.210-py3-none-any.whl#sha256=a48be70d409e88fa467d2cdb03c6bfa060126b24c6db0c7c8c5f254f5d69b005 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,879   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.209-py3-none-any.whl#sha256=e08e4b7970f6313a3cec2f5b21e879e882313af83d5b60baa2090785116ef7b3 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,879   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.208-py3-none-any.whl#sha256=fd7463eae779dca872e82f29fc67ce4c8bbd241acb4476fd65902bb276a289ec (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,880   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.207-py3-none-any.whl#sha256=101968277dc4116303b4b76a778b35bf11987dd3842db7821860709712dd98ec (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,881   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.206-py3-none-any.whl#sha256=f4b936fcaf51dbfc599bf691c57ab610e9f0c1638f75db934385ebc7f5eed71d (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,881   Skipping link: No binaries permitted for oncoref: https://www.piwheels.org/simple/oncoref/oncoref-1.8.205-py3-none-any.whl#sha256=d76fd01512929bb11f5708de43c4b013649c1098f65940bac9a57add930cfdc1 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,982   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.25-py3-none-any.whl#sha256=af07dfe64ba72883f3223dd56f5b55a3370d8deb1d781fcff373e4aa696cadd2 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,983   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.23-py3-none-any.whl#sha256=93e12c751d36e6067e12446d95075d3f1529e62cabab5ddafc06717951f4b978 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
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2026-10-16T22:34:03,985   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.19-py3-none-any.whl#sha256=bbbd40de31c902830f47fa96432cc1984e1164d334e95a40633e18ec8caaa41e (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,987   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.18-py3-none-any.whl#sha256=91f223a369ce125813e0c188cafd3277343fd2ca1caa4d34a5394ba1cb195781 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,988   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.17-py3-none-any.whl#sha256=5fa3e3356c1574425d42aebe7d135c933ff623b539736554634a762eeaab4a29 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,988   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.16-py3-none-any.whl#sha256=9defcd77c3360e0675a10c0b8de4a1784c19f227a985079b95e21e462de63e97 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,989   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.15-py3-none-any.whl#sha256=4dcd40c2e5c10b8f8be0d8df8489b5f05153d465eb43ddf7f9dc158bbe6b1de3 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,989   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.14-py3-none-any.whl#sha256=ac41cf84ca97c695a15f40326738750e2762e39f366bf99300777803874b26da (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,990   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.13-py3-none-any.whl#sha256=91c3e1fa8448033a913075559a2ee2b76fcbad64e20aeb7696484a9a5619dbef (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,990   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.12-py3-none-any.whl#sha256=2a0e59477b8939fc63d4a78f31b0b793fb2f49ea2aab861d853fa8479ccf9608 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,991   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.11-py3-none-any.whl#sha256=602ac0deb73739e65dfb65105b23357a94a67eb9e1faac0880bff5203ed4a818 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,991   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.10-py3-none-any.whl#sha256=3e789fd35641073e8afc8885dcef12d74a2323c2e0c8dad7b5e369392675e83a (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,992   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.9-py3-none-any.whl#sha256=2415de57054126a885d64b626bbb12657ce55d0791a686b7aba85fd8b784d399 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,993   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.8-py3-none-any.whl#sha256=f1b7351039ce534abc9d36a03b53fd9479b1629b4a6fd8698bc500162f1cd362 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,993   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.7-py3-none-any.whl#sha256=84f80af8afa25d02579e67983b74fd2e515df1ce6d0cb602ecb6808e994f8f63 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,994   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.6-py3-none-any.whl#sha256=460f281fc846e410a5992e3a87193febdfac8bf81f3e5497a5e5d72ae58176bf (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,994   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.5-py3-none-any.whl#sha256=cfedb20aa2c2593dfb010bc01a13d5b6c732ec5cf013fd70b65c71d1adb71f7e (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,995   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.4-py3-none-any.whl#sha256=d649c7a749c099fe67033ecbdbafe4bf8bcd93bd71d9830ce2a6127a1c093cad (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,996   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.3-py3-none-any.whl#sha256=bf75676ac99a0d1c144249b8cf320ac292b65716c9ffdc50ad27b55db1153821 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,996   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.2-py3-none-any.whl#sha256=9f47ca1a637e6255fbf29fd252834c85e5d19238a980add71843cd860b39777e (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,996   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.1-py3-none-any.whl#sha256=12f0eb28c115080796010095a4032b844d9ea4383bc0ea2e2b75a3e5f21c9392 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,997   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.8.0-py3-none-any.whl#sha256=6f9be6d1511d7e84166b02f2cd219b977025db68916073cb4bd1ebdfc8919914 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,998   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.7.0-py3-none-any.whl#sha256=249750fecb30a99d715c221ca1ca76a4ff790891f0051782cd528395d14db6ed (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,998   Skipping link: No binaries permitted for oncoref: https://archive1.piwheels.org/simple/oncoref/oncoref-1.6.0-py3-none-any.whl#sha256=e8383754a89924adfeb524e978f9d8e304fe5f179989515ee7ee4ae3eaa3d997 (from https://www.piwheels.org/simple/oncoref/) (requires-python:>=3.9)
2026-10-16T22:34:03,999 Skipping link: not a file: https://www.piwheels.org/simple/oncoref/
2026-10-16T22:34:03,999 Skipping link: not a file: https://pypi.org/simple/oncoref/
2026-10-16T22:34:04,044 Given no hashes to check 1 links for project 'oncoref': discarding no candidates
2026-10-16T22:34:04,063 Collecting oncoref==1.9.12
2026-10-16T22:34:04,065   Created temporary directory: /tmp/pip-unpack-dz01kdy7
2026-10-16T22:34:04,221   Downloading oncoref-1.9.12.tar.gz (14.6 MB)
2026-10-16T22:34:06,822   Added oncoref==1.9.12 from https://files.pythonhosted.org/packages/4a/3f/8ef61eda36afc27d13f825df7caeec6f3101fc74b55d1bf793b494b9d38f/oncoref-1.9.12.tar.gz to build tracker '/tmp/pip-build-tracker-4v224qou'
2026-10-16T22:34:06,833   Created temporary directory: /tmp/pip-build-env-uq3xpbz7
2026-10-16T22:34:06,839   Installing build dependencies: started
2026-10-16T22:34:06,841   Running command pip subprocess to install build dependencies
2026-10-16T22:34:08,010   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-10-16T22:34:08,426   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-16T22:34:08,449   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-16T22:34:10,238   Collecting setuptools>=77.0.0
2026-10-16T22:34:10,239     Obtaining dependency information for setuptools>=77.0.0 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata
2026-10-16T22:34:10,252     Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-10-16T22:34:10,489   Collecting wheel
2026-10-16T22:34:10,490     Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata
2026-10-16T22:34:10,503     Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata (2.3 kB)
2026-10-16T22:34:10,687   Collecting packaging>=24.0
2026-10-16T22:34:10,688     Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata
2026-10-16T22:34:10,701     Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata (3.6 kB)
2026-10-16T22:34:10,892   Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB)
2026-10-16T22:34:10,912   Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB)
2026-10-16T22:34:10,978   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-16T22:34:11,013   Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB)
2026-10-16T22:34:11,041   Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB)
2026-10-16T22:34:11,124   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-16T22:34:13,923   Installing collected packages: setuptools, packaging, wheel
2026-10-16T22:34:16,617     Creating /tmp/pip-build-env-uq3xpbz7/overlay/local/bin
2026-10-16T22:34:16,619     changing mode of /tmp/pip-build-env-uq3xpbz7/overlay/local/bin/wheel to 755
2026-10-16T22:34:16,640   Successfully installed packaging-26.3 setuptools-84.0.0 wheel-0.48.0
2026-10-16T22:34:16,926   Installing build dependencies: finished with status 'done'
2026-10-16T22:34:16,932   Getting requirements to build wheel: started
2026-10-16T22:34:16,933   Running command Getting requirements to build wheel
2026-10-16T22:34:17,639   running egg_info
2026-10-16T22:34:17,645   writing oncoref.egg-info/PKG-INFO
2026-10-16T22:34:17,652   writing dependency_links to oncoref.egg-info/dependency_links.txt
2026-10-16T22:34:17,654   writing entry points to oncoref.egg-info/entry_points.txt
2026-10-16T22:34:17,658   writing requirements to oncoref.egg-info/requires.txt
2026-10-16T22:34:17,660   writing top-level names to oncoref.egg-info/top_level.txt
2026-10-16T22:34:17,709   reading manifest file 'oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:17,729   reading manifest template 'MANIFEST.in'
2026-10-16T22:34:17,759   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression'
2026-10-16T22:34:17,762   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-percentiles'
2026-10-16T22:34:17,764   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-representatives'
2026-10-16T22:34:17,766   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-within-sample-top5'
2026-10-16T22:34:17,768   warning: no previously-included files found matching 'oncoref/data/pan-cancer-expression.csv'
2026-10-16T22:34:17,770   warning: no previously-included files found matching 'oncoref/data/hpa-cell-type-expression.csv'
2026-10-16T22:34:17,771   adding license file 'LICENSE'
2026-10-16T22:34:17,789   writing manifest file 'oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:17,890   Getting requirements to build wheel: finished with status 'done'
2026-10-16T22:34:17,893   Created temporary directory: /tmp/pip-modern-metadata-csrjktq7
2026-10-16T22:34:17,895   Preparing metadata (pyproject.toml): started
2026-10-16T22:34:17,897   Running command Preparing metadata (pyproject.toml)
2026-10-16T22:34:18,545   running dist_info
2026-10-16T22:34:18,556   creating /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info
2026-10-16T22:34:18,557   writing /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/PKG-INFO
2026-10-16T22:34:18,564   writing dependency_links to /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/dependency_links.txt
2026-10-16T22:34:18,565   writing entry points to /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/entry_points.txt
2026-10-16T22:34:18,569   writing requirements to /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/requires.txt
2026-10-16T22:34:18,570   writing top-level names to /tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/top_level.txt
2026-10-16T22:34:18,571   writing manifest file '/tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:18,617   reading manifest file '/tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:18,619   reading manifest template 'MANIFEST.in'
2026-10-16T22:34:18,650   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression'
2026-10-16T22:34:18,651   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-percentiles'
2026-10-16T22:34:18,653   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-representatives'
2026-10-16T22:34:18,654   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-within-sample-top5'
2026-10-16T22:34:18,655   warning: no previously-included files found matching 'oncoref/data/pan-cancer-expression.csv'
2026-10-16T22:34:18,657   warning: no previously-included files found matching 'oncoref/data/hpa-cell-type-expression.csv'
2026-10-16T22:34:18,657   adding license file 'LICENSE'
2026-10-16T22:34:18,670   writing manifest file '/tmp/pip-modern-metadata-csrjktq7/oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:18,671   creating '/tmp/pip-modern-metadata-csrjktq7/oncoref-1.9.12.dist-info'
2026-10-16T22:34:18,800   Preparing metadata (pyproject.toml): finished with status 'done'
2026-10-16T22:34:18,805   Source in /tmp/pip-wheel-ei1ctdm9/oncoref_bd282bfbcc6147f089d392b45772ab69 has version 1.9.12, which satisfies requirement oncoref==1.9.12 from https://files.pythonhosted.org/packages/4a/3f/8ef61eda36afc27d13f825df7caeec6f3101fc74b55d1bf793b494b9d38f/oncoref-1.9.12.tar.gz
2026-10-16T22:34:18,806   Removed oncoref==1.9.12 from https://files.pythonhosted.org/packages/4a/3f/8ef61eda36afc27d13f825df7caeec6f3101fc74b55d1bf793b494b9d38f/oncoref-1.9.12.tar.gz from build tracker '/tmp/pip-build-tracker-4v224qou'
2026-10-16T22:34:18,813 Created temporary directory: /tmp/pip-unpack-o0jf9_9t
2026-10-16T22:34:18,814 Building wheels for collected packages: oncoref
2026-10-16T22:34:18,818   Created temporary directory: /tmp/pip-wheel-hz1fgttb
2026-10-16T22:34:18,818   Destination directory: /tmp/pip-wheel-hz1fgttb
2026-10-16T22:34:18,820   Building wheel for oncoref (pyproject.toml): started
2026-10-16T22:34:18,822   Running command Building wheel for oncoref (pyproject.toml)
2026-10-16T22:34:19,454   running bdist_wheel
2026-10-16T22:34:19,472   running build
2026-10-16T22:34:19,473   running build_py
2026-10-16T22:34:19,480   creating build/lib/oncoref
2026-10-16T22:34:19,482   copying oncoref/cta_gate_audit.py -> build/lib/oncoref
2026-10-16T22:34:19,485   copying oncoref/cohorts.py -> build/lib/oncoref
2026-10-16T22:34:19,486   copying oncoref/gene_families.py -> build/lib/oncoref
2026-10-16T22:34:19,489   copying oncoref/hpa_cancer.py -> build/lib/oncoref
2026-10-16T22:34:19,492   copying oncoref/cancer_ontology.py -> build/lib/oncoref
2026-10-16T22:34:19,494   copying oncoref/figure_style.py -> build/lib/oncoref
2026-10-16T22:34:19,497   copying oncoref/mouse.py -> build/lib/oncoref
2026-10-16T22:34:19,499   copying oncoref/catalog.py -> build/lib/oncoref
2026-10-16T22:34:19,501   copying oncoref/peptides.py -> build/lib/oncoref
2026-10-16T22:34:19,503   copying oncoref/cli.py -> build/lib/oncoref
2026-10-16T22:34:19,506   copying oncoref/legacy.py -> build/lib/oncoref
2026-10-16T22:34:19,508   copying oncoref/cta_curation_plots.py -> build/lib/oncoref
2026-10-16T22:34:19,511   copying oncoref/proteoforms.py -> build/lib/oncoref
2026-10-16T22:34:19,513   copying oncoref/normalization.py -> build/lib/oncoref
2026-10-16T22:34:19,516   copying oncoref/expression_registry.py -> build/lib/oncoref
2026-10-16T22:34:19,519   copying oncoref/human.py -> build/lib/oncoref
2026-10-16T22:34:19,520   copying oncoref/human_protein_atlas.py -> build/lib/oncoref
2026-10-16T22:34:19,522   copying oncoref/doga.py -> build/lib/oncoref
2026-10-16T22:34:19,524   copying oncoref/cta_peptides.py -> build/lib/oncoref
2026-10-16T22:34:19,526   copying oncoref/hpa.py -> build/lib/oncoref
2026-10-16T22:34:19,528   copying oncoref/drivers.py -> build/lib/oncoref
2026-10-16T22:34:19,531   copying oncoref/barkbase.py -> build/lib/oncoref
2026-10-16T22:34:19,532   copying oncoref/apd1.py -> build/lib/oncoref
2026-10-16T22:34:19,534   copying oncoref/cta_coverage.py -> build/lib/oncoref
2026-10-16T22:34:19,537   copying oncoref/species.py -> build/lib/oncoref
2026-10-16T22:34:19,539   copying oncoref/bgee_srp009687.py -> build/lib/oncoref
2026-10-16T22:34:19,541   copying oncoref/cancer_types.py -> build/lib/oncoref
2026-10-16T22:34:19,545   copying oncoref/antigen_coverage.py -> build/lib/oncoref
2026-10-16T22:34:19,547   copying oncoref/bgee_srp181218.py -> build/lib/oncoref
2026-10-16T22:34:19,549   copying oncoref/data_bundle.py -> build/lib/oncoref
2026-10-16T22:34:19,552   copying oncoref/expression_source_adapters.py -> build/lib/oncoref
2026-10-16T22:34:19,558   copying oncoref/representative_partitions.py -> build/lib/oncoref
2026-10-16T22:34:19,560   copying oncoref/expression_builders.py -> build/lib/oncoref
2026-10-16T22:34:19,566   copying oncoref/fusions.py -> build/lib/oncoref
2026-10-16T22:34:19,568   copying oncoref/samples.py -> build/lib/oncoref
2026-10-16T22:34:19,570   copying oncoref/genome.py -> build/lib/oncoref
2026-10-16T22:34:19,573   copying oncoref/expression_contract.py -> build/lib/oncoref
2026-10-16T22:34:19,575   copying oncoref/pfizer_canine_rna.py -> build/lib/oncoref
2026-10-16T22:34:19,577   copying oncoref/tumor_references.py -> build/lib/oncoref
2026-10-16T22:34:19,580   copying oncoref/load_dataset.py -> build/lib/oncoref
2026-10-16T22:34:19,583   copying oncoref/version.py -> build/lib/oncoref
2026-10-16T22:34:19,585   copying oncoref/species_antigens.py -> build/lib/oncoref
2026-10-16T22:34:19,587   copying oncoref/expression_engine.py -> build/lib/oncoref
2026-10-16T22:34:19,590   copying oncoref/expression_provenance_plots.py -> build/lib/oncoref
2026-10-16T22:34:19,593   copying oncoref/expression.py -> build/lib/oncoref
2026-10-16T22:34:19,599   copying oncoref/species_expression.py -> build/lib/oncoref
2026-10-16T22:34:19,602   copying oncoref/cta_sources.py -> build/lib/oncoref
2026-10-16T22:34:19,604   copying oncoref/figure_output.py -> build/lib/oncoref
2026-10-16T22:34:19,607   copying oncoref/incidence.py -> build/lib/oncoref
2026-10-16T22:34:19,609   copying oncoref/canine.py -> build/lib/oncoref
2026-10-16T22:34:19,611   copying oncoref/tmb.py -> build/lib/oncoref
2026-10-16T22:34:19,614   copying oncoref/_table_io.py -> build/lib/oncoref
2026-10-16T22:34:19,616   copying oncoref/cta_tissues.py -> build/lib/oncoref
2026-10-16T22:34:19,618   copying oncoref/gse304066.py -> build/lib/oncoref
2026-10-16T22:34:19,620   copying oncoref/species_assets.py -> build/lib/oncoref
2026-10-16T22:34:19,623   copying oncoref/_evidence_resolution.py -> build/lib/oncoref
2026-10-16T22:34:19,625   copying oncoref/gene_ids.py -> build/lib/oncoref
2026-10-16T22:34:19,627   copying oncoref/human_cta_snapshot.py -> build/lib/oncoref
2026-10-16T22:34:19,630   copying oncoref/reference_data.py -> build/lib/oncoref
2026-10-16T22:34:19,632   copying oncoref/therapy_evidence.py -> build/lib/oncoref
2026-10-16T22:34:19,634   copying oncoref/plots.py -> build/lib/oncoref
2026-10-16T22:34:19,638   copying oncoref/cta_provenance.py -> build/lib/oncoref
2026-10-16T22:34:19,640   copying oncoref/ici_response.py -> build/lib/oncoref
2026-10-16T22:34:19,643   copying oncoref/reference_identity.py -> build/lib/oncoref
2026-10-16T22:34:19,645   copying oncoref/data_manifest.py -> build/lib/oncoref
2026-10-16T22:34:19,648   copying oncoref/pfizer_canine_protein.py -> build/lib/oncoref
2026-10-16T22:34:19,649   copying oncoref/cancer_genes.py -> build/lib/oncoref
2026-10-16T22:34:19,651   copying oncoref/gene_qc.py -> build/lib/oncoref
2026-10-16T22:34:19,654   copying oncoref/cta_regen.py -> build/lib/oncoref
2026-10-16T22:34:19,656   copying oncoref/ici.py -> build/lib/oncoref
2026-10-16T22:34:19,660   copying oncoref/response_signatures.py -> build/lib/oncoref
2026-10-16T22:34:19,662   copying oncoref/cta_landscape.py -> build/lib/oncoref
2026-10-16T22:34:19,664   copying oncoref/source_matrices.py -> build/lib/oncoref
2026-10-16T22:34:19,667   copying oncoref/_reference_sources.py -> build/lib/oncoref
2026-10-16T22:34:19,669   copying oncoref/coverage.py -> build/lib/oncoref
2026-10-16T22:34:19,671   copying oncoref/rna_protein.py -> build/lib/oncoref
2026-10-16T22:34:19,674   copying oncoref/cta_review.py -> build/lib/oncoref
2026-10-16T22:34:19,677   copying oncoref/gene_identity.py -> build/lib/oncoref
2026-10-16T22:34:19,679   copying oncoref/__init__.py -> build/lib/oncoref
2026-10-16T22:34:19,682   copying oncoref/sequence_groups.py -> build/lib/oncoref
2026-10-16T22:34:19,684   copying oncoref/cta.py -> build/lib/oncoref
2026-10-16T22:34:19,707   creating build/lib/oncoref/data
2026-10-16T22:34:19,708   copying oncoref/data/clean-tpm-censored-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,727   copying oncoref/data/cta-publication-sources.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,730   copying oncoref/data/therapy-benefit-toxicity-evidence.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,732   copying oncoref/data/cancer-lineage-groups.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,734   copying oncoref/data/source-matrices.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,737   copying oncoref/data/cancer-ici-response.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,740   copying oncoref/data/cancer-type-registry.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,744   copying oncoref/data/cta-specificity-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,746   copying oncoref/data/fusion-surrogate-expression.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,749   copying oncoref/data/cancer-code-burden-map.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,751   copying oncoref/data/proteoform-groups.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,753   copying oncoref/data/disease-state-rules.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,756   copying oncoref/data/cancer-driver-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,759   copying oncoref/data/mitochondrial-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,761   copying oncoref/data/hpa-cancer-rna-cohorts.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,763   copying oncoref/data/cohort-registry.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,766   copying oncoref/data/histone-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,769   copying oncoref/data/expression-artifact-gene-universe-deltas.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,776   copying oncoref/data/cta-gene-publication-evidence.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,779   copying oncoref/data/extra-tx-mappings.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,782   copying oncoref/data/cancer-key-gene-citation-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,788   copying oncoref/data/cancer-type-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,792   copying oncoref/data/cancer-tmb.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,795   copying oncoref/data/cta-clinical-targets.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,798   copying oncoref/data/censored-gene-reference-tpm.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,802   copying oncoref/data/driver-gene-evidence.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,810   copying oncoref/data/cancer-reference-expression-availability.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,816   copying oncoref/data/rrna-and-pseudogenes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,819   copying oncoref/data/cancer-reference-sample-molecular-provenance.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,824   copying oncoref/data/rna-protein-calibration-sources.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,827   copying oncoref/data/cta-warning-reviews.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,829   copying oncoref/data/cancer-entity-driver-spectrum.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,832   copying oncoref/data/ensembl-id-aliases.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,843   copying oncoref/data/cta-candidate-references.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,845   copying oncoref/data/cancer-viral-antigens.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,848   copying oncoref/data/cancer-ici-response-estimates.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,859   copying oncoref/data/proteoform-groups-genome.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,862   copying oncoref/data/representative-source-adjudications.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,864   copying oncoref/data/cancer-ici-source-locator-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,869   copying oncoref/data/cancer-apd1-response.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,873   copying oncoref/data/cta-ihc-unreliable.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,876   copying oncoref/data/fusion-expression-effects.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,878   copying oncoref/data/driver-variant-evidence.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,885   copying oncoref/data/legacy-dataset-dispositions.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,888   copying oncoref/data/hemoglobin-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,891   copying oncoref/data/nuclear-retained-lncrnas.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,893   copying oncoref/data/rna-protein-hpa-prior-sources.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,896   copying oncoref/data/cancer-response-signatures.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,898   copying oncoref/data/cancer-expression-source-candidates.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,902   copying oncoref/data/family-burden-map.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,905   copying oncoref/data/proteoform-collapse-overrides.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,907   copying oncoref/data/cancer-fusions.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,911   copying oncoref/data/hpa-safety-tissue-map.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,914   copying oncoref/data/cta-publication-membership.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,964   copying oncoref/data/cancer-driver-variants.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,967   copying oncoref/data/cdna-identical-gene-groups.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,971   copying oncoref/data/cancer-normal-tissue-map.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,973   copying oncoref/data/cancer-subtype-groupings.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,975   copying oncoref/data/small-noncoding-rnas.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,981   copying oncoref/data/ribosomal-protein-pseudogenes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,984   copying oncoref/data/degenerate-subtype-pairs.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,986   copying oncoref/data/cancer-cohort-aggregates.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,988   copying oncoref/data/cancer-tmb-source-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,992   copying oncoref/data/narrative-gene-sets.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,994   copying oncoref/data/cancer-incidence-mortality.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,996   copying oncoref/data/ribosomal-protein-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:19,998   copying oncoref/data/rare-cancer-fusion-rules.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,001   copying oncoref/data/cancer-mismatch-repair-statuses.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,003   copying oncoref/data/gse294016-sample-diagnoses.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,006   copying oncoref/data/cancer-key-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,010   copying oncoref/data/tissue-burden-map.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,013   copying oncoref/data/cancer-lineage-group-overrides.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,015   copying oncoref/data/numt-pseudogenes.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,017   copying oncoref/data/cancer-testis-antigens.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,042   copying oncoref/data/cta-reviewed-evidence.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,045   copying oncoref/data/hpa-cancer-crosswalk.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,047   copying oncoref/data/clean-tpm-biological-housekeeping-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,050   copying oncoref/data/cancer-who-soft-tissue-bone-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,053   copying oncoref/data/cancer-frameshift-burden.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,055   copying oncoref/data/cancer-fusion-citation-audit.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,058   copying oncoref/data/housekeeping-genes.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,060   copying oncoref/data/cancer-testis-antigens-extended.csv -> build/lib/oncoref/data
2026-10-16T22:34:20,078   copying oncoref/data/rna-protein-hpa-priors.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,093   copying oncoref/data/rna-protein-calibrations.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,262   copying oncoref/data/ncbi-entrez-gene-mappings.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,279   copying oncoref/data/ncbi-symbol-synonyms.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,287   copying oncoref/data/rna-protein-calibration-samples.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,290   copying oncoref/data/cancer-reference-expression-samples.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,297   copying oncoref/data/canonical-gene-space.csv.gz -> build/lib/oncoref/data
2026-10-16T22:34:20,307   copying oncoref/data/expression_sources.yaml -> build/lib/oncoref/data
2026-10-16T22:34:20,311   creating build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,313   copying oncoref/data/species/dog/expression_sources.yaml -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,316   copying oncoref/data/species/dog/lineage_overlaps.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,318   copying oncoref/data/species/dog/bgee-srp181218-samples.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,323   copying oncoref/data/species/dog/assets.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,325   copying oncoref/data/species/dog/pfizer-dog-protein-samples.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,329   copying oncoref/data/species/dog/cta-evidence.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,335   copying oncoref/data/species/dog/barkbase-samples.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,341   copying oncoref/data/species/dog/bgee-srp009687-samples.json -> build/lib/oncoref/data/species/dog
2026-10-16T22:34:20,344   copying oncoref/data/hpa-cancer-sources.json -> build/lib/oncoref/data
2026-10-16T22:34:20,361   installing to build/bdist.linux-armv7l/wheel
2026-10-16T22:34:20,362   running install
2026-10-16T22:34:20,385   running install_lib
2026-10-16T22:34:20,391   creating build/bdist.linux-armv7l/wheel
2026-10-16T22:34:20,394   creating build/bdist.linux-armv7l/wheel/oncoref
2026-10-16T22:34:20,396   copying build/lib/oncoref/cta_gate_audit.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,399   copying build/lib/oncoref/cohorts.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,401   copying build/lib/oncoref/gene_families.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,404   copying build/lib/oncoref/hpa_cancer.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,406   copying build/lib/oncoref/cancer_ontology.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,409   copying build/lib/oncoref/figure_style.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,412   copying build/lib/oncoref/mouse.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,414   copying build/lib/oncoref/catalog.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,417   copying build/lib/oncoref/peptides.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,419   copying build/lib/oncoref/cli.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,422   copying build/lib/oncoref/legacy.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,425   copying build/lib/oncoref/cta_curation_plots.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,428   copying build/lib/oncoref/proteoforms.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,431   copying build/lib/oncoref/normalization.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,434   copying build/lib/oncoref/expression_registry.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,437   copying build/lib/oncoref/human.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,439   copying build/lib/oncoref/human_protein_atlas.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,441   copying build/lib/oncoref/doga.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,443   copying build/lib/oncoref/cta_peptides.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,444   copying build/lib/oncoref/hpa.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,447   copying build/lib/oncoref/drivers.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,449   copying build/lib/oncoref/barkbase.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,451   copying build/lib/oncoref/apd1.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,454   copying build/lib/oncoref/cta_coverage.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,455   copying build/lib/oncoref/species.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,458   copying build/lib/oncoref/bgee_srp009687.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,459   copying build/lib/oncoref/cancer_types.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,464   copying build/lib/oncoref/antigen_coverage.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,466   copying build/lib/oncoref/bgee_srp181218.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,468   copying build/lib/oncoref/data_bundle.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,471   copying build/lib/oncoref/expression_source_adapters.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,476   copying build/lib/oncoref/representative_partitions.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,478   copying build/lib/oncoref/expression_builders.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,484   copying build/lib/oncoref/fusions.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,486   copying build/lib/oncoref/samples.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,489   copying build/lib/oncoref/genome.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,492   copying build/lib/oncoref/expression_contract.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,495   copying build/lib/oncoref/pfizer_canine_rna.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,497   copying build/lib/oncoref/tumor_references.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,500   copying build/lib/oncoref/load_dataset.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,502   copying build/lib/oncoref/version.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,505   copying build/lib/oncoref/species_antigens.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,508   copying build/lib/oncoref/expression_engine.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,511   copying build/lib/oncoref/expression_provenance_plots.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,513   copying build/lib/oncoref/expression.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,520   copying build/lib/oncoref/species_expression.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,523   copying build/lib/oncoref/cta_sources.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,526   copying build/lib/oncoref/figure_output.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,529   copying build/lib/oncoref/incidence.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,531   copying build/lib/oncoref/canine.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,533   copying build/lib/oncoref/tmb.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,537   copying build/lib/oncoref/_table_io.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,539   copying build/lib/oncoref/cta_tissues.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,542   copying build/lib/oncoref/gse304066.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,544   copying build/lib/oncoref/species_assets.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,546   copying build/lib/oncoref/_evidence_resolution.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,549   copying build/lib/oncoref/gene_ids.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,551   copying build/lib/oncoref/human_cta_snapshot.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,554   copying build/lib/oncoref/reference_data.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,557   copying build/lib/oncoref/therapy_evidence.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,559   copying build/lib/oncoref/plots.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,563   copying build/lib/oncoref/cta_provenance.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,565   copying build/lib/oncoref/ici_response.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,568   copying build/lib/oncoref/reference_identity.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,570   copying build/lib/oncoref/data_manifest.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,573   copying build/lib/oncoref/pfizer_canine_protein.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,575   copying build/lib/oncoref/cancer_genes.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,578   copying build/lib/oncoref/gene_qc.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,581   copying build/lib/oncoref/cta_regen.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,584   copying build/lib/oncoref/ici.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,587   copying build/lib/oncoref/response_signatures.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,589   copying build/lib/oncoref/cta_landscape.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,592   copying build/lib/oncoref/source_matrices.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,595   copying build/lib/oncoref/_reference_sources.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,597   copying build/lib/oncoref/coverage.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,600   copying build/lib/oncoref/rna_protein.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,604   copying build/lib/oncoref/cta_review.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,607   copying build/lib/oncoref/gene_identity.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,609   copying build/lib/oncoref/__init__.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,612   copying build/lib/oncoref/sequence_groups.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:20,617   creating build/bdist.linux-armv7l/wheel/oncoref/data
2026-10-16T22:34:20,618   copying build/lib/oncoref/data/clean-tpm-censored-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,634   copying build/lib/oncoref/data/cta-publication-sources.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,636   copying build/lib/oncoref/data/rna-protein-hpa-priors.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,650   creating build/bdist.linux-armv7l/wheel/oncoref/data/species
2026-10-16T22:34:20,652   creating build/bdist.linux-armv7l/wheel/oncoref/data/species/dog
2026-10-16T22:34:20,654   copying build/lib/oncoref/data/species/dog/lineage_overlaps.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,656   copying build/lib/oncoref/data/species/dog/bgee-srp181218-samples.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,661   copying build/lib/oncoref/data/species/dog/assets.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,664   copying build/lib/oncoref/data/species/dog/pfizer-dog-protein-samples.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,668   copying build/lib/oncoref/data/species/dog/cta-evidence.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,675   copying build/lib/oncoref/data/species/dog/barkbase-samples.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,681   copying build/lib/oncoref/data/species/dog/bgee-srp009687-samples.json -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,684   copying build/lib/oncoref/data/species/dog/expression_sources.yaml -> build/bdist.linux-armv7l/wheel/./oncoref/data/species/dog
2026-10-16T22:34:20,686   copying build/lib/oncoref/data/therapy-benefit-toxicity-evidence.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,688   copying build/lib/oncoref/data/cancer-lineage-groups.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,690   copying build/lib/oncoref/data/source-matrices.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,693   copying build/lib/oncoref/data/cancer-ici-response.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,695   copying build/lib/oncoref/data/rna-protein-calibrations.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,836   copying build/lib/oncoref/data/ncbi-entrez-gene-mappings.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,852   copying build/lib/oncoref/data/cancer-type-registry.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,856   copying build/lib/oncoref/data/cta-specificity-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,858   copying build/lib/oncoref/data/fusion-surrogate-expression.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,860   copying build/lib/oncoref/data/cancer-code-burden-map.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,862   copying build/lib/oncoref/data/proteoform-groups.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,865   copying build/lib/oncoref/data/disease-state-rules.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,867   copying build/lib/oncoref/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,870   copying build/lib/oncoref/data/mitochondrial-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,872   copying build/lib/oncoref/data/hpa-cancer-rna-cohorts.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,874   copying build/lib/oncoref/data/ncbi-symbol-synonyms.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,884   copying build/lib/oncoref/data/cohort-registry.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,886   copying build/lib/oncoref/data/histone-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,889   copying build/lib/oncoref/data/expression-artifact-gene-universe-deltas.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,896   copying build/lib/oncoref/data/cta-gene-publication-evidence.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,899   copying build/lib/oncoref/data/extra-tx-mappings.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,901   copying build/lib/oncoref/data/cancer-key-gene-citation-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,906   copying build/lib/oncoref/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,908   copying build/lib/oncoref/data/cancer-tmb.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,911   copying build/lib/oncoref/data/cta-clinical-targets.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,913   copying build/lib/oncoref/data/censored-gene-reference-tpm.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,917   copying build/lib/oncoref/data/driver-gene-evidence.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,924   copying build/lib/oncoref/data/cancer-reference-expression-availability.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,930   copying build/lib/oncoref/data/rrna-and-pseudogenes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,932   copying build/lib/oncoref/data/cancer-reference-sample-molecular-provenance.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,936   copying build/lib/oncoref/data/rna-protein-calibration-sources.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,939   copying build/lib/oncoref/data/cta-warning-reviews.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,941   copying build/lib/oncoref/data/cancer-entity-driver-spectrum.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,942   copying build/lib/oncoref/data/ensembl-id-aliases.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,950   copying build/lib/oncoref/data/cta-candidate-references.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,952   copying build/lib/oncoref/data/cancer-viral-antigens.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,954   copying build/lib/oncoref/data/cancer-ici-response-estimates.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,962   copying build/lib/oncoref/data/proteoform-groups-genome.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,965   copying build/lib/oncoref/data/representative-source-adjudications.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,967   copying build/lib/oncoref/data/cancer-ici-source-locator-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,971   copying build/lib/oncoref/data/cancer-apd1-response.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,974   copying build/lib/oncoref/data/cta-ihc-unreliable.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,975   copying build/lib/oncoref/data/fusion-expression-effects.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,978   copying build/lib/oncoref/data/driver-variant-evidence.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,983   copying build/lib/oncoref/data/legacy-dataset-dispositions.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,985   copying build/lib/oncoref/data/hemoglobin-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,987   copying build/lib/oncoref/data/nuclear-retained-lncrnas.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,988   copying build/lib/oncoref/data/rna-protein-hpa-prior-sources.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,990   copying build/lib/oncoref/data/cancer-response-signatures.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,992   copying build/lib/oncoref/data/cancer-expression-source-candidates.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,995   copying build/lib/oncoref/data/family-burden-map.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,996   copying build/lib/oncoref/data/proteoform-collapse-overrides.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:20,998   copying build/lib/oncoref/data/cancer-fusions.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,001   copying build/lib/oncoref/data/hpa-safety-tissue-map.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,004   copying build/lib/oncoref/data/cta-publication-membership.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,052   copying build/lib/oncoref/data/rna-protein-calibration-samples.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,055   copying build/lib/oncoref/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,058   copying build/lib/oncoref/data/cdna-identical-gene-groups.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,060   copying build/lib/oncoref/data/cancer-normal-tissue-map.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,063   copying build/lib/oncoref/data/cancer-subtype-groupings.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,064   copying build/lib/oncoref/data/small-noncoding-rnas.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,069   copying build/lib/oncoref/data/hpa-cancer-sources.json -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,071   copying build/lib/oncoref/data/ribosomal-protein-pseudogenes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,074   copying build/lib/oncoref/data/degenerate-subtype-pairs.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,077   copying build/lib/oncoref/data/cancer-cohort-aggregates.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,078   copying build/lib/oncoref/data/cancer-tmb-source-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,082   copying build/lib/oncoref/data/narrative-gene-sets.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,083   copying build/lib/oncoref/data/cancer-incidence-mortality.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,086   copying build/lib/oncoref/data/ribosomal-protein-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,088   copying build/lib/oncoref/data/cancer-reference-expression-samples.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,094   copying build/lib/oncoref/data/rare-cancer-fusion-rules.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,097   copying build/lib/oncoref/data/cancer-mismatch-repair-statuses.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,098   copying build/lib/oncoref/data/canonical-gene-space.csv.gz -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,108   copying build/lib/oncoref/data/gse294016-sample-diagnoses.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,109   copying build/lib/oncoref/data/cancer-key-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,113   copying build/lib/oncoref/data/tissue-burden-map.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,115   copying build/lib/oncoref/data/cancer-lineage-group-overrides.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,117   copying build/lib/oncoref/data/numt-pseudogenes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,119   copying build/lib/oncoref/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,140   copying build/lib/oncoref/data/cta-reviewed-evidence.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,142   copying build/lib/oncoref/data/hpa-cancer-crosswalk.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,144   copying build/lib/oncoref/data/clean-tpm-biological-housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,146   copying build/lib/oncoref/data/expression_sources.yaml -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,150   copying build/lib/oncoref/data/cancer-who-soft-tissue-bone-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,153   copying build/lib/oncoref/data/cancer-frameshift-burden.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,155   copying build/lib/oncoref/data/cancer-fusion-citation-audit.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,158   copying build/lib/oncoref/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,160   copying build/lib/oncoref/data/cancer-testis-antigens-extended.csv -> build/bdist.linux-armv7l/wheel/./oncoref/data
2026-10-16T22:34:21,183   copying build/lib/oncoref/cta.py -> build/bdist.linux-armv7l/wheel/./oncoref
2026-10-16T22:34:21,187   running install_egg_info
2026-10-16T22:34:21,196   running egg_info
2026-10-16T22:34:21,201   writing oncoref.egg-info/PKG-INFO
2026-10-16T22:34:21,207   writing dependency_links to oncoref.egg-info/dependency_links.txt
2026-10-16T22:34:21,209   writing entry points to oncoref.egg-info/entry_points.txt
2026-10-16T22:34:21,212   writing requirements to oncoref.egg-info/requires.txt
2026-10-16T22:34:21,213   writing top-level names to oncoref.egg-info/top_level.txt
2026-10-16T22:34:21,243   reading manifest file 'oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:21,262   reading manifest template 'MANIFEST.in'
2026-10-16T22:34:21,292   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression'
2026-10-16T22:34:21,294   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-percentiles'
2026-10-16T22:34:21,296   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-representatives'
2026-10-16T22:34:21,298   warning: no previously-included files matching '*' found under directory 'oncoref/data/cancer-reference-expression-within-sample-top5'
2026-10-16T22:34:21,300   warning: no previously-included files found matching 'oncoref/data/pan-cancer-expression.csv'
2026-10-16T22:34:21,301   warning: no previously-included files found matching 'oncoref/data/hpa-cell-type-expression.csv'
2026-10-16T22:34:21,302   adding license file 'LICENSE'
2026-10-16T22:34:21,319   writing manifest file 'oncoref.egg-info/SOURCES.txt'
2026-10-16T22:34:21,321   Copying oncoref.egg-info to build/bdist.linux-armv7l/wheel/./oncoref-1.9.12-py3.11.egg-info
2026-10-16T22:34:21,333   running install_scripts
2026-10-16T22:34:21,346   creating build/bdist.linux-armv7l/wheel/oncoref-1.9.12.dist-info/WHEEL
2026-10-16T22:34:21,349   creating '/tmp/pip-wheel-hz1fgttb/.tmp-uvz01mnl/oncoref-1.9.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-10-16T22:34:21,355   adding 'oncoref/__init__.py'
2026-10-16T22:34:21,357   adding 'oncoref/_evidence_resolution.py'
2026-10-16T22:34:21,358   adding 'oncoref/_reference_sources.py'
2026-10-16T22:34:21,360   adding 'oncoref/_table_io.py'
2026-10-16T22:34:21,361   adding 'oncoref/antigen_coverage.py'
2026-10-16T22:34:21,364   adding 'oncoref/apd1.py'
2026-10-16T22:34:21,365   adding 'oncoref/barkbase.py'
2026-10-16T22:34:21,366   adding 'oncoref/bgee_srp009687.py'
2026-10-16T22:34:21,367   adding 'oncoref/bgee_srp181218.py'
2026-10-16T22:34:21,369   adding 'oncoref/cancer_genes.py'
2026-10-16T22:34:21,371   adding 'oncoref/cancer_ontology.py'
2026-10-16T22:34:21,384   adding 'oncoref/cancer_types.py'
2026-10-16T22:34:21,386   adding 'oncoref/canine.py'
2026-10-16T22:34:21,388   adding 'oncoref/catalog.py'
2026-10-16T22:34:21,393   adding 'oncoref/cli.py'
2026-10-16T22:34:21,395   adding 'oncoref/cohorts.py'
2026-10-16T22:34:21,400   adding 'oncoref/coverage.py'
2026-10-16T22:34:21,405   adding 'oncoref/cta.py'
2026-10-16T22:34:21,406   adding 'oncoref/cta_coverage.py'
2026-10-16T22:34:21,411   adding 'oncoref/cta_curation_plots.py'
2026-10-16T22:34:21,412   adding 'oncoref/cta_gate_audit.py'
2026-10-16T22:34:21,415   adding 'oncoref/cta_landscape.py'
2026-10-16T22:34:21,417   adding 'oncoref/cta_peptides.py'
2026-10-16T22:34:21,419   adding 'oncoref/cta_provenance.py'
2026-10-16T22:34:21,423   adding 'oncoref/cta_regen.py'
2026-10-16T22:34:21,428   adding 'oncoref/cta_review.py'
2026-10-16T22:34:21,430   adding 'oncoref/cta_sources.py'
2026-10-16T22:34:21,432   adding 'oncoref/cta_tissues.py'
2026-10-16T22:34:21,438   adding 'oncoref/data_bundle.py'
2026-10-16T22:34:21,441   adding 'oncoref/data_manifest.py'
2026-10-16T22:34:21,443   adding 'oncoref/doga.py'
2026-10-16T22:34:21,445   adding 'oncoref/drivers.py'
2026-10-16T22:34:21,476   adding 'oncoref/expression.py'
2026-10-16T22:34:21,503   adding 'oncoref/expression_builders.py'
2026-10-16T22:34:21,506   adding 'oncoref/expression_contract.py'
2026-10-16T22:34:21,510   adding 'oncoref/expression_engine.py'
2026-10-16T22:34:21,512   adding 'oncoref/expression_provenance_plots.py'
2026-10-16T22:34:21,514   adding 'oncoref/expression_registry.py'
2026-10-16T22:34:21,528   adding 'oncoref/expression_source_adapters.py'
2026-10-16T22:34:21,530   adding 'oncoref/figure_output.py'
2026-10-16T22:34:21,533   adding 'oncoref/figure_style.py'
2026-10-16T22:34:21,535   adding 'oncoref/fusions.py'
2026-10-16T22:34:21,538   adding 'oncoref/gene_families.py'
2026-10-16T22:34:21,540   adding 'oncoref/gene_identity.py'
2026-10-16T22:34:21,543   adding 'oncoref/gene_ids.py'
2026-10-16T22:34:21,545   adding 'oncoref/gene_qc.py'
2026-10-16T22:34:21,547   adding 'oncoref/genome.py'
2026-10-16T22:34:21,548   adding 'oncoref/gse304066.py'
2026-10-16T22:34:21,551   adding 'oncoref/hpa.py'
2026-10-16T22:34:21,553   adding 'oncoref/hpa_cancer.py'
2026-10-16T22:34:21,555   adding 'oncoref/human.py'
2026-10-16T22:34:21,556   adding 'oncoref/human_cta_snapshot.py'
2026-10-16T22:34:21,558   adding 'oncoref/human_protein_atlas.py'
2026-10-16T22:34:21,564   adding 'oncoref/ici.py'
2026-10-16T22:34:21,566   adding 'oncoref/ici_response.py'
2026-10-16T22:34:21,568   adding 'oncoref/incidence.py'
2026-10-16T22:34:21,569   adding 'oncoref/legacy.py'
2026-10-16T22:34:21,571   adding 'oncoref/load_dataset.py'
2026-10-16T22:34:21,573   adding 'oncoref/mouse.py'
2026-10-16T22:34:21,578   adding 'oncoref/normalization.py'
2026-10-16T22:34:21,581   adding 'oncoref/peptides.py'
2026-10-16T22:34:21,582   adding 'oncoref/pfizer_canine_protein.py'
2026-10-16T22:34:21,583   adding 'oncoref/pfizer_canine_rna.py'
2026-10-16T22:34:21,592   adding 'oncoref/plots.py'
2026-10-16T22:34:21,595   adding 'oncoref/proteoforms.py'
2026-10-16T22:34:21,597   adding 'oncoref/reference_data.py'
2026-10-16T22:34:21,599   adding 'oncoref/reference_identity.py'
2026-10-16T22:34:21,601   adding 'oncoref/representative_partitions.py'
2026-10-16T22:34:21,602   adding 'oncoref/response_signatures.py'
2026-10-16T22:34:21,605   adding 'oncoref/rna_protein.py'
2026-10-16T22:34:21,607   adding 'oncoref/samples.py'
2026-10-16T22:34:21,608   adding 'oncoref/sequence_groups.py'
2026-10-16T22:34:21,611   adding 'oncoref/source_matrices.py'
2026-10-16T22:34:21,613   adding 'oncoref/species.py'
2026-10-16T22:34:21,615   adding 'oncoref/species_antigens.py'
2026-10-16T22:34:21,617   adding 'oncoref/species_assets.py'
2026-10-16T22:34:21,620   adding 'oncoref/species_expression.py'
2026-10-16T22:34:21,621   adding 'oncoref/therapy_evidence.py'
2026-10-16T22:34:21,624   adding 'oncoref/tmb.py'
2026-10-16T22:34:21,627   adding 'oncoref/tumor_references.py'
2026-10-16T22:34:21,629   adding 'oncoref/version.py'
2026-10-16T22:34:21,634   adding 'oncoref/data/cancer-apd1-response.csv'
2026-10-16T22:34:21,635   adding 'oncoref/data/cancer-code-burden-map.csv'
2026-10-16T22:34:21,636   adding 'oncoref/data/cancer-cohort-aggregates.csv'
2026-10-16T22:34:21,641   adding 'oncoref/data/cancer-driver-genes.csv'
2026-10-16T22:34:21,644   adding 'oncoref/data/cancer-driver-variants.csv'
2026-10-16T22:34:21,645   adding 'oncoref/data/cancer-entity-driver-spectrum.csv'
2026-10-16T22:34:21,649   adding 'oncoref/data/cancer-expression-source-candidates.csv'
2026-10-16T22:34:21,650   adding 'oncoref/data/cancer-frameshift-burden.csv'
2026-10-16T22:34:21,654   adding 'oncoref/data/cancer-fusion-citation-audit.csv'
2026-10-16T22:34:21,658   adding 'oncoref/data/cancer-fusions.csv'
2026-10-16T22:34:21,683   adding 'oncoref/data/cancer-ici-response-estimates.csv'
2026-10-16T22:34:21,688   adding 'oncoref/data/cancer-ici-response.csv'
2026-10-16T22:34:21,696   adding 'oncoref/data/cancer-ici-source-locator-audit.csv'
2026-10-16T22:34:21,699   adding 'oncoref/data/cancer-incidence-mortality.csv'
2026-10-16T22:34:21,714   adding 'oncoref/data/cancer-key-gene-citation-audit.csv'
2026-10-16T22:34:21,728   adding 'oncoref/data/cancer-key-genes.csv'
2026-10-16T22:34:21,729   adding 'oncoref/data/cancer-lineage-group-overrides.csv'
2026-10-16T22:34:21,731   adding 'oncoref/data/cancer-lineage-groups.csv'
2026-10-16T22:34:21,732   adding 'oncoref/data/cancer-mismatch-repair-statuses.csv'
2026-10-16T22:34:21,733   adding 'oncoref/data/cancer-normal-tissue-map.csv'
2026-10-16T22:34:21,741   adding 'oncoref/data/cancer-reference-expression-availability.csv'
2026-10-16T22:34:21,772   adding 'oncoref/data/cancer-reference-expression-samples.csv.gz'
2026-10-16T22:34:21,778   adding 'oncoref/data/cancer-reference-sample-molecular-provenance.csv'
2026-10-16T22:34:21,780   adding 'oncoref/data/cancer-response-signatures.csv'
2026-10-16T22:34:21,781   adding 'oncoref/data/cancer-subtype-groupings.csv'
2026-10-16T22:34:21,857   adding 'oncoref/data/cancer-testis-antigens-extended.csv'
2026-10-16T22:34:21,939   adding 'oncoref/data/cancer-testis-antigens.csv'
2026-10-16T22:34:21,951   adding 'oncoref/data/cancer-tmb-source-audit.csv'
2026-10-16T22:34:21,955   adding 'oncoref/data/cancer-tmb.csv'
2026-10-16T22:34:21,958   adding 'oncoref/data/cancer-type-genes.csv'
2026-10-16T22:34:21,964   adding 'oncoref/data/cancer-type-registry.csv'
2026-10-16T22:34:21,965   adding 'oncoref/data/cancer-viral-antigens.csv'
2026-10-16T22:34:21,968   adding 'oncoref/data/cancer-who-soft-tissue-bone-audit.csv'
2026-10-16T22:34:22,021   adding 'oncoref/data/canonical-gene-space.csv.gz'
2026-10-16T22:34:22,026   adding 'oncoref/data/cdna-identical-gene-groups.csv'
2026-10-16T22:34:22,036   adding 'oncoref/data/censored-gene-reference-tpm.csv'
2026-10-16T22:34:22,038   adding 'oncoref/data/clean-tpm-biological-housekeeping-genes.csv'
2026-10-16T22:34:22,075   adding 'oncoref/data/clean-tpm-censored-genes.csv'
2026-10-16T22:34:22,083   adding 'oncoref/data/cohort-registry.csv'
2026-10-16T22:34:22,085   adding 'oncoref/data/cta-candidate-references.csv'
2026-10-16T22:34:22,086   adding 'oncoref/data/cta-clinical-targets.csv'
2026-10-16T22:34:22,088   adding 'oncoref/data/cta-gene-publication-evidence.csv'
2026-10-16T22:34:22,089   adding 'oncoref/data/cta-ihc-unreliable.csv'
2026-10-16T22:34:22,190   adding 'oncoref/data/cta-publication-membership.csv'
2026-10-16T22:34:22,208   adding 'oncoref/data/cta-publication-sources.csv'
2026-10-16T22:34:22,210   adding 'oncoref/data/cta-reviewed-evidence.csv'
2026-10-16T22:34:22,212   adding 'oncoref/data/cta-specificity-audit.csv'
2026-10-16T22:34:22,213   adding 'oncoref/data/cta-warning-reviews.csv'
2026-10-16T22:34:22,214   adding 'oncoref/data/degenerate-subtype-pairs.csv'
2026-10-16T22:34:22,216   adding 'oncoref/data/disease-state-rules.csv'
2026-10-16T22:34:22,225   adding 'oncoref/data/driver-gene-evidence.csv'
2026-10-16T22:34:22,233   adding 'oncoref/data/driver-variant-evidence.csv'
2026-10-16T22:34:22,261   adding 'oncoref/data/ensembl-id-aliases.csv'
2026-10-16T22:34:22,275   adding 'oncoref/data/expression-artifact-gene-universe-deltas.csv'
2026-10-16T22:34:22,287   adding 'oncoref/data/expression_sources.yaml'
2026-10-16T22:34:22,289   adding 'oncoref/data/extra-tx-mappings.csv'
2026-10-16T22:34:22,290   adding 'oncoref/data/family-burden-map.csv'
2026-10-16T22:34:22,292   adding 'oncoref/data/fusion-expression-effects.csv'
2026-10-16T22:34:22,294   adding 'oncoref/data/fusion-surrogate-expression.csv'
2026-10-16T22:34:22,295   adding 'oncoref/data/gse294016-sample-diagnoses.csv'
2026-10-16T22:34:22,296   adding 'oncoref/data/hemoglobin-genes.csv'
2026-10-16T22:34:22,298   adding 'oncoref/data/histone-genes.csv'
2026-10-16T22:34:22,299   adding 'oncoref/data/housekeeping-genes.csv'
2026-10-16T22:34:22,300   adding 'oncoref/data/hpa-cancer-crosswalk.csv'
2026-10-16T22:34:22,302   adding 'oncoref/data/hpa-cancer-rna-cohorts.csv'
2026-10-16T22:34:22,304   adding 'oncoref/data/hpa-cancer-sources.json'
2026-10-16T22:34:22,305   adding 'oncoref/data/hpa-safety-tissue-map.csv'
2026-10-16T22:34:22,307   adding 'oncoref/data/legacy-dataset-dispositions.csv'
2026-10-16T22:34:22,308   adding 'oncoref/data/mitochondrial-genes.csv'
2026-10-16T22:34:22,309   adding 'oncoref/data/narrative-gene-sets.csv'
2026-10-16T22:34:22,411   adding 'oncoref/data/ncbi-entrez-gene-mappings.csv.gz'
2026-10-16T22:34:22,458   adding 'oncoref/data/ncbi-symbol-synonyms.csv.gz'
2026-10-16T22:34:22,461   adding 'oncoref/data/nuclear-retained-lncrnas.csv'
2026-10-16T22:34:22,463   adding 'oncoref/data/numt-pseudogenes.csv'
2026-10-16T22:34:22,464   adding 'oncoref/data/proteoform-collapse-overrides.csv'
2026-10-16T22:34:22,467   adding 'oncoref/data/proteoform-groups-genome.csv'
2026-10-16T22:34:22,469   adding 'oncoref/data/proteoform-groups.csv'
2026-10-16T22:34:22,471   adding 'oncoref/data/rare-cancer-fusion-rules.csv'
2026-10-16T22:34:22,472   adding 'oncoref/data/representative-source-adjudications.csv'
2026-10-16T22:34:22,473   adding 'oncoref/data/ribosomal-protein-genes.csv'
2026-10-16T22:34:22,480   adding 'oncoref/data/ribosomal-protein-pseudogenes.csv'
2026-10-16T22:34:22,482   adding 'oncoref/data/rna-protein-calibration-samples.csv.gz'
2026-10-16T22:34:22,483   adding 'oncoref/data/rna-protein-calibration-sources.csv'
2026-10-16T22:34:23,649   adding 'oncoref/data/rna-protein-calibrations.csv.gz'
2026-10-16T22:34:23,712   adding 'oncoref/data/rna-protein-hpa-prior-sources.csv'
2026-10-16T22:34:23,802   adding 'oncoref/data/rna-protein-hpa-priors.csv.gz'
2026-10-16T22:34:23,808   adding 'oncoref/data/rrna-and-pseudogenes.csv'
2026-10-16T22:34:23,827   adding 'oncoref/data/small-noncoding-rnas.csv'
2026-10-16T22:34:23,829   adding 'oncoref/data/source-matrices.csv'
2026-10-16T22:34:23,831   adding 'oncoref/data/therapy-benefit-toxicity-evidence.csv'
2026-10-16T22:34:23,832   adding 'oncoref/data/tissue-burden-map.csv'
2026-10-16T22:34:23,835   adding 'oncoref/data/species/dog/assets.json'
2026-10-16T22:34:23,841   adding 'oncoref/data/species/dog/barkbase-samples.json'
2026-10-16T22:34:23,844   adding 'oncoref/data/species/dog/bgee-srp009687-samples.json'
2026-10-16T22:34:23,850   adding 'oncoref/data/species/dog/bgee-srp181218-samples.json'
2026-10-16T22:34:23,860   adding 'oncoref/data/species/dog/cta-evidence.json'
2026-10-16T22:34:23,863   adding 'oncoref/data/species/dog/expression_sources.yaml'
2026-10-16T22:34:23,865   adding 'oncoref/data/species/dog/lineage_overlaps.json'
2026-10-16T22:34:23,867   adding 'oncoref/data/species/dog/pfizer-dog-protein-samples.json'
2026-10-16T22:34:23,871   adding 'oncoref-1.9.12.dist-info/licenses/LICENSE'
2026-10-16T22:34:23,873   adding 'oncoref-1.9.12.dist-info/METADATA'
2026-10-16T22:34:23,874   adding 'oncoref-1.9.12.dist-info/WHEEL'
2026-10-16T22:34:23,875   adding 'oncoref-1.9.12.dist-info/entry_points.txt'
2026-10-16T22:34:23,876   adding 'oncoref-1.9.12.dist-info/top_level.txt'
2026-10-16T22:34:23,879   adding 'oncoref-1.9.12.dist-info/RECORD'
2026-10-16T22:34:24,060   removing build/bdist.linux-armv7l/wheel
2026-10-16T22:34:24,223   Building wheel for oncoref (pyproject.toml): finished with status 'done'
2026-10-16T22:34:24,540   Created wheel for oncoref: filename=oncoref-1.9.12-py3-none-any.whl size=14202433 sha256=b772859d2f46e21ede3a4a16deca1dcc9bafed6f541d5f62dbaf7fbb206b4137
2026-10-16T22:34:24,541   Stored in directory: /tmp/pip-ephem-wheel-cache-912rhrhx/wheels/ea/f1/5e/081062ef7a9c5806407065db657196a1b1b4cc65a5713408e8
2026-10-16T22:34:24,565 Successfully built oncoref
2026-10-16T22:34:24,955 Removed build tracker: '/tmp/pip-build-tracker-4v224qou'