2026-10-19T04:59:33,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-lwpj83jt
2026-10-19T04:59:33,391 Created temporary directory: /tmp/pip-build-tracker-ydu437ai
2026-10-19T04:59:33,391 Initialized build tracking at /tmp/pip-build-tracker-ydu437ai
2026-10-19T04:59:33,392 Created build tracker: /tmp/pip-build-tracker-ydu437ai
2026-10-19T04:59:33,393 Entered build tracker: /tmp/pip-build-tracker-ydu437ai
2026-10-19T04:59:33,393 Created temporary directory: /tmp/pip-wheel-dzgzzlcj
2026-10-19T04:59:33,397 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-19T04:59:33,399 Created temporary directory: /tmp/pip-ephem-wheel-cache-i8l5nobb
2026-10-19T04:59:33,421 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-19T04:59:33,424 2 location(s) to search for versions of isovar:
2026-10-19T04:59:33,424 * https://pypi.org/simple/isovar/
2026-10-19T04:59:33,424 * https://www.piwheels.org/simple/isovar/
2026-10-19T04:59:33,425 Fetching project page and analyzing links: https://pypi.org/simple/isovar/
2026-10-19T04:59:33,426 Getting page https://pypi.org/simple/isovar/
2026-10-19T04:59:33,427 Found index url https://pypi.org/simple
2026-10-19T04:59:33,702 Fetched page https://pypi.org/simple/isovar/ as application/vnd.pypi.simple.v1+json
2026-10-19T04:59:33,767   Found link https://files.pythonhosted.org/packages/b6/80/350ac9b97f7c872d7f2422a11bdb228a0286661fe2983884724735bff630/isovar-0.0.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.0.5
2026-10-19T04:59:33,768   Found link https://files.pythonhosted.org/packages/09/7c/e80ccfcab66948d3c69dd70159439be76843cfcc08421a7b0e50248a6c34/isovar-0.0.6.tar.gz (from https://pypi.org/simple/isovar/), version: 0.0.6
2026-10-19T04:59:33,768   Found link https://files.pythonhosted.org/packages/ac/c8/a208dbd44c8e1010147b662a62fc5cb4114024eebb5a47dd9da1beca8aa8/isovar-0.1.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.0
2026-10-19T04:59:33,769   Found link https://files.pythonhosted.org/packages/f8/2c/7217a7fe510804c536a379cf7e66cf92fb056bb5d9a552de1d4774d6fe12/isovar-0.1.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.3
2026-10-19T04:59:33,770   Found link https://files.pythonhosted.org/packages/1d/1f/d51e079dd9a1d9c572405e64b25feffdcdeefac96786451d4caa1bab671e/isovar-0.1.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.1.5
2026-10-19T04:59:33,771   Found link https://files.pythonhosted.org/packages/ff/ae/5df86c7a7f4449949dfc43961e50ac47963582c303b40659a1762feb14c2/isovar-0.2.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.0
2026-10-19T04:59:33,772   Found link https://files.pythonhosted.org/packages/ab/e1/110b3dab08491c53f28a69c65c9effd112c0ae4a9412a6ff3328655dee91/isovar-0.2.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.1
2026-10-19T04:59:33,772   Found link https://files.pythonhosted.org/packages/03/ac/1627b0180ffd2aff813066e0f455d65c49d13e1774e944dfc29726c247b0/isovar-0.2.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.2
2026-10-19T04:59:33,773   Found link https://files.pythonhosted.org/packages/72/bf/82e36d137b0866be27e0a27c1545fa4fb0b519e1aac31734b239fff5bff9/isovar-0.2.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.3
2026-10-19T04:59:33,774   Found link https://files.pythonhosted.org/packages/ef/24/21c68468b0b1130123aadc8451be794806adf0ebc7a63f8eb0e0ad30fca3/isovar-0.2.4.tar.gz (from https://pypi.org/simple/isovar/), version: 0.2.4
2026-10-19T04:59:33,775   Found link https://files.pythonhosted.org/packages/d7/d7/b4749eb20a87bd034eae20ee564eb8d69a109a3c74ddfd0044a4ad9e4d0a/isovar-0.4.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.4.0
2026-10-19T04:59:33,775   Found link https://files.pythonhosted.org/packages/1e/5a/5dc4f54bb9d10f3bd3755b5e87bfd51b33f5c538b69af6d807509698a297/isovar-0.5.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.5.0
2026-10-19T04:59:33,776   Found link https://files.pythonhosted.org/packages/c9/a1/c06698d8df3d589ba44819394d4c78273c81d6472135fe96ce73b01f33b3/isovar-0.5.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.5.2
2026-10-19T04:59:33,777   Found link https://files.pythonhosted.org/packages/19/c9/6e8f71fb30ac619216f5ccbf0a444ba2cf19fc0e9955c5d1ef8984e01264/isovar-0.6.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.6.0
2026-10-19T04:59:33,778   Found link https://files.pythonhosted.org/packages/a2/c7/c98501932e9bf937a69d9f13cd3cdc91b92936520f2f27d3c3961bf14c2f/isovar-0.6.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.6.1
2026-10-19T04:59:33,778   Found link https://files.pythonhosted.org/packages/b3/6e/66e364fe1888d0a1c57e34142d1a10c17c2a74fec1d2ac2229c7f8405ec3/isovar-0.7.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.0
2026-10-19T04:59:33,779   Found link https://files.pythonhosted.org/packages/27/84/9251647726f83d32a9af94b54e9faacd046b9ecca0cd415f436acde977b9/isovar-0.7.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.1
2026-10-19T04:59:33,779   Found link https://files.pythonhosted.org/packages/b0/1c/c0f91c7c46aac659e075d34e0d55a05c5dbfd38727a4ee39911f6bf7d1e6/isovar-0.7.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.2
2026-10-19T04:59:33,780   Found link https://files.pythonhosted.org/packages/0e/f2/dc74cc8ce342d8ea408452ebda0ad498f1879c28e2d01b42f96e8ea7cba1/isovar-0.7.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.3
2026-10-19T04:59:33,780   Found link https://files.pythonhosted.org/packages/0d/3c/f7108c0b1aba27d58b30075287874b88b194cc34ba8938a89cfdc40fbc19/isovar-0.7.4.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.4
2026-10-19T04:59:33,781   Found link https://files.pythonhosted.org/packages/71/d3/bae7fe9f6548b2a6f7824dd3eca34fab47971070b8a5559f1c8ba80f263a/isovar-0.7.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.7.5
2026-10-19T04:59:33,782   Found link https://files.pythonhosted.org/packages/76/78/807f6ebeb5f5ecb974093a18e62e7cb70695d55289448df65495be290052/isovar-0.8.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.0
2026-10-19T04:59:33,783   Found link https://files.pythonhosted.org/packages/8d/8d/231aa93b4e2668cb701253e8b3b62c0a8cf0d76d5570ebd80999ee1d1240/isovar-0.8.1.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.1
2026-10-19T04:59:33,783   Found link https://files.pythonhosted.org/packages/37/33/79dad79cecfc192bdbd65593c0ebf693ab7ca44aeba59f6fcda3e2933f21/isovar-0.8.2.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.2
2026-10-19T04:59:33,784   Found link https://files.pythonhosted.org/packages/8c/ab/99e3ac9a148d0acd27abf5e6d640eba635cdfdeacd876bee1bf27c0bf05f/isovar-0.8.3.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.3
2026-10-19T04:59:33,785   Found link https://files.pythonhosted.org/packages/da/ed/1f4d8fed9c2cc26b80124726bd7dd40d4f5b7e5b8afdadb8a62077bd58a1/isovar-0.8.5.tar.gz (from https://pypi.org/simple/isovar/), version: 0.8.5
2026-10-19T04:59:33,785   Found link https://files.pythonhosted.org/packages/54/91/402d3e534b4b063e6fbba41ae872627ed3e67b0ad1246f9721eb652f2237/isovar-0.9.0.tar.gz (from https://pypi.org/simple/isovar/), version: 0.9.0
2026-10-19T04:59:33,786   Found link https://files.pythonhosted.org/packages/d4/ac/f45056b97d888ecc95ce3694d270a08c9610eb45823c0ca6a907a156d7f5/isovar-1.0.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.0
2026-10-19T04:59:33,787   Found link https://files.pythonhosted.org/packages/92/cd/3ee3c6155d5471cdb712ccc2c59e19ebfc896ace3adbb322d26bd45dace9/isovar-1.0.1.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.1
2026-10-19T04:59:33,787   Found link https://files.pythonhosted.org/packages/77/2f/222f0d24e0baf292e4b87a9a0b1d0313668d649bbbbe3be1ede886a8e5eb/isovar-1.0.2.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.2
2026-10-19T04:59:33,788   Found link https://files.pythonhosted.org/packages/28/32/2279cf21d9d31608c4169a18e26aefd82ff9ab6d8df8df54f860f31b0601/isovar-1.0.3.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.3
2026-10-19T04:59:33,789   Found link https://files.pythonhosted.org/packages/f5/cc/8d7a6eeebae8cf6d31df23bcf5dcb5f14aad7fd4ef12790393e16426da12/isovar-1.0.4.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.4
2026-10-19T04:59:33,790   Found link https://files.pythonhosted.org/packages/e2/e3/470ea2f19176ace9ea4b19d855e025456aa529748e30c1a66e3ad1874559/isovar-1.0.5.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.5
2026-10-19T04:59:33,790   Found link https://files.pythonhosted.org/packages/0f/9f/358c17b6d0527e0b1ceb056d1b8fbb2bf0307d5181f32d4e72089bdce605/isovar-1.0.6.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.6
2026-10-19T04:59:33,791   Found link https://files.pythonhosted.org/packages/66/c1/95a0e55994915b6cbbf4bccbcafeb88b9db4838d7b934341bb97ff97b2e7/isovar-1.0.7.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.7
2026-10-19T04:59:33,792   Found link https://files.pythonhosted.org/packages/80/db/7d4cdb69c95e6a6abbfabdff6145ad18a80125d4fb72ae90510c9547712c/isovar-1.0.8.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.8
2026-10-19T04:59:33,792   Found link https://files.pythonhosted.org/packages/72/8b/5c6413f8bdede23be5e966366bb79d158d4b2ccb6465f9718f86cdb17c1b/isovar-1.0.9.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.9
2026-10-19T04:59:33,793   Found link https://files.pythonhosted.org/packages/77/93/1198731f9a82344e62c506aae7498e62ee7d66b47d9a41044449775d981a/isovar-1.0.10.tar.gz (from https://pypi.org/simple/isovar/), version: 1.0.10
2026-10-19T04:59:33,793   Found link https://files.pythonhosted.org/packages/c8/c4/bbc73d818113ef77f38866db48fef6fd04c82cdb90ec1a92415e98a7da3f/isovar-1.1.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.1.0
2026-10-19T04:59:33,794   Found link https://files.pythonhosted.org/packages/b5/1e/138d88128449d2753f828c169a45688e5d1c5b011544a83cdfa2e64af97a/isovar-1.1.1.tar.gz (from https://pypi.org/simple/isovar/), version: 1.1.1
2026-10-19T04:59:33,795   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/e5/35/3e24c2e9c31374a7d9a283598cdc15cc85082d1b59206016a8a2c09efc7c/isovar-1.3.0-py3-none-any.whl (from https://pypi.org/simple/isovar/)
2026-10-19T04:59:33,795   Found link https://files.pythonhosted.org/packages/83/be/38d44747eb1c3825a566651a8da85f85584069f1894eb7799fd2bf61a1ec/isovar-1.3.0.tar.gz (from https://pypi.org/simple/isovar/), version: 1.3.0
2026-10-19T04:59:33,796   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/2b/2e/3fbc2ce1f15635ff2d0d88fd6f730c15db30b31059de43ec8eed64fa36f9/isovar-1.4.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,797   Found link https://files.pythonhosted.org/packages/3f/f1/f4adc10fc650b60cc01f1d3101df6edde5169ec141a72dd60f32cc7eb938/isovar-1.4.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.0
2026-10-19T04:59:33,798   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f9/85/b300ad76c791ce7d5eb06accf9a7d9f24f634637d7fc5e441b0cf1f96afa/isovar-1.4.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,799   Found link https://files.pythonhosted.org/packages/60/2f/928cba23685bc68c9ffeec0d44ff96995984000d9a6def21318812d19f23/isovar-1.4.1.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.1
2026-10-19T04:59:33,800   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/17/86/3361736a384ab2247ca528a2348fabfeabaa6c4463ecf28c0d3a40de71be/isovar-1.4.2-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,801   Found link https://files.pythonhosted.org/packages/a2/f6/8fbda26c9a1f2f41f20d8db7e728fb8801a92a1117c4178b8e3017d08918/isovar-1.4.2.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.2
2026-10-19T04:59:33,802   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f2/fc/d3646435e77cfa4eef0be724a31fd83e79437990d83df475429aeab0564e/isovar-1.4.3-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,803   Found link https://files.pythonhosted.org/packages/19/ce/279e8f08372e8849172e3ec87fc089c70bf0431f154d997280a266077dc2/isovar-1.4.3.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.3
2026-10-19T04:59:33,803   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/ab/4e/bc718e6a78e78637176157a6b6e5617016d09f2db80600dc2e5b2afe53bc/isovar-1.4.4-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,804   Found link https://files.pythonhosted.org/packages/f7/26/95f0b4d23a436de0e1a3cb061cdad8ad22a704c069c88f5ae0ce6ccd4bcb/isovar-1.4.4.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.4
2026-10-19T04:59:33,805   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/f7/80/81c1c5df1febf045c98a1547851fdb3a0b3b92b579eeff83839a144dbe68/isovar-1.4.5-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,806   Found link https://files.pythonhosted.org/packages/44/1c/4dec1a588428119d26b2667a92cb41bcf2803a001229fda11970040fa20f/isovar-1.4.5.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.5
2026-10-19T04:59:33,807   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/66/65/a5b102914f586ff695750dbb827ef94e0176bddce2cd571700c9bec8b139/isovar-1.4.6-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,807   Found link https://files.pythonhosted.org/packages/fa/59/482a12362246dbf244ac190cd2768aaebc6e07ba8a237504cbca589841b9/isovar-1.4.6.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.6
2026-10-19T04:59:33,808   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/ba/b5/c1bd18b5366c10004e211bc4808da830682c0733eb74b405c07ceaa96d37/isovar-1.4.7-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,809   Found link https://files.pythonhosted.org/packages/0a/9e/6f427722575d49f3e339e3fb76ca11d831dcfb611a166dd0335215adc89c/isovar-1.4.7.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.7
2026-10-19T04:59:33,810   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/a0/b4/65ebf7d449bc8e9afb7821ce35e9afe72c003def3302998be1b4c7c01a9e/isovar-1.4.8-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,811   Found link https://files.pythonhosted.org/packages/a2/d4/f093bdaaa02d2e8fc4ea86420464b5494319999a5b5caa22f7ee3b4092b9/isovar-1.4.8.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.8
2026-10-19T04:59:33,812   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/cf/2e/80194c271082f9c50740fb62ea97761af06938b29b1286df20120503d2ad/isovar-1.4.9-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,813   Found link https://files.pythonhosted.org/packages/7a/1b/bfeac801a9180b1cf0de776783e0463b266694bdb0827e9232392f7b94f1/isovar-1.4.9.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.9
2026-10-19T04:59:33,814   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/96/12/94b6a4eb8baaa753e37fd657b62d817da629f0e53e3685d5c6ccac20637e/isovar-1.4.10-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,815   Found link https://files.pythonhosted.org/packages/64/31/cee9d8c349e124cb70e40d539c8569e33bb464e43f36b123664b17c32901/isovar-1.4.10.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.10
2026-10-19T04:59:33,816   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/18/6a/a69049c5f32b88f9db17df55df567a1e5ce755a06b4cb619acb5dfc07ff7/isovar-1.4.11-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:33,817   Found link https://files.pythonhosted.org/packages/28/de/3373a7a004353691b970c0540e0533f6981a5d6b4b9d9a2895535c370634/isovar-1.4.11.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.4.11
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2026-10-19T04:59:34,388   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/85/09/fe9e2483db1805986b08a8cec565c14ed78db2ac4c104026d32e534c6656/isovar-1.47.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
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2026-10-19T04:59:34,401   Found link https://files.pythonhosted.org/packages/01/e5/5357c854c0dc7a43a623c335e86664e5d2fa91a860fcc198fd3d882b788b/isovar-1.53.2.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.53.2
2026-10-19T04:59:34,402   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/71/75/6e07bfb13c082d7a2b242fab602bb4b9b6705cc81d987dec368190ebb515/isovar-1.53.3-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,403   Found link https://files.pythonhosted.org/packages/de/e8/f677d0a711b5493136650c7aca470f2a1f5e7183ac76fdc54befcce1bfc4/isovar-1.53.3.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.53.3
2026-10-19T04:59:34,403   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/dc/6e/226da489950fc4564c00310effd7f90679852762cd8fd13bcaa549d91a94/isovar-1.53.4-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,404   Found link https://files.pythonhosted.org/packages/6d/13/414d45e7d36ca7b76574e50d313fd46086d4804061d725e85e4c23e1fb29/isovar-1.53.4.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.53.4
2026-10-19T04:59:34,405   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/25/91/847640d27076d9e52d19bdab4926e6b1e10f030bfb54c2e484eeb91ac70a/isovar-1.53.5-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,405   Found link https://files.pythonhosted.org/packages/b5/d7/7b5d644198d22b109fe73b0c8f046f8dc30f2b9e8656066f576f93812736/isovar-1.53.5.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.53.5
2026-10-19T04:59:34,406   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/da/35/2fe123efc7fc09327f2f6f0583f357b8b2bcd93dadaa760a131b0aa32f8f/isovar-1.54.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,407   Found link https://files.pythonhosted.org/packages/6c/85/333cfde35a822acc55f90450bd5cf264d42d57c48dc1d493087c40e22dfe/isovar-1.54.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.54.0
2026-10-19T04:59:34,408   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/0a/2d/6e5080e61809b76c9d15b3a9ea247aeeddcfc9a4d35b70d27c45c17ea958/isovar-1.54.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,409   Found link https://files.pythonhosted.org/packages/df/e1/6c373010475ece3f8b9ea5724233845948319bf4de88eb6627649efdd661/isovar-1.54.1.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.54.1
2026-10-19T04:59:34,409   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/5f/46/33be1773abe25b2916b7f4b0f5e8413eb45ad082b65c329589305a129191/isovar-1.54.2-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
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2026-10-19T04:59:34,411   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/27/8d/aa66ac2fecda820237cadd8dbb53996f3dcbac9d5c28f567ad1b69914d90/isovar-1.54.3-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
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2026-10-19T04:59:34,414   Found link https://files.pythonhosted.org/packages/8b/6c/dc94e15c625cd7709ec034e7b977f13ebb681c45c6932a2cdbf6648e1675/isovar-1.55.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.55.0
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2026-10-19T04:59:34,416   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/a2/dc/3cb50f5cf389d6bdc833d4b3fa22ed1c3f7cfd4cf7f0a97e6ee5e582088b/isovar-1.56.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
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2026-10-19T04:59:34,420   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/ee/7f/eada527b6bcacfcfc3161f5e4f25d651ded97b7a998d82886e77e2208643/isovar-1.57.1-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
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2026-10-19T04:59:34,422   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/52/2f/34bd13bc0412956bf94541f4ce8bdeee3ec5c3452dd190c35ed538b00460/isovar-1.57.2-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,423   Found link https://files.pythonhosted.org/packages/11/ed/2fff120cc745589374ab419b008bab48bdc04dbd9bbe5a91eec6f6153515/isovar-1.57.2.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.57.2
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2026-10-19T04:59:34,426   Found link https://files.pythonhosted.org/packages/92/bc/8480def310afb07cd7867dce7ae21b074d18ddb4a14be86a2e34044b6e20/isovar-1.57.3.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.57.3
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2026-10-19T04:59:34,428   Found link https://files.pythonhosted.org/packages/e6/5e/423511074abd88286e779f418adb99dc7e477aed5b5c4d33c340f994e239/isovar-1.57.4.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.57.4
2026-10-19T04:59:34,429   Skipping link: No binaries permitted for isovar: https://files.pythonhosted.org/packages/83/c6/f5d1ae0ad4f879d8bd89d6713423d92a041d9ff2ca294551d5f7ebdca15a/isovar-1.58.0-py3-none-any.whl (from https://pypi.org/simple/isovar/) (requires-python:>=3.9)
2026-10-19T04:59:34,430   Found link https://files.pythonhosted.org/packages/f6/53/c4a8e838564c51dd50d4afd857432ed51b411e1e245a96a29fe3037dd4cc/isovar-1.58.0.tar.gz (from https://pypi.org/simple/isovar/) (requires-python:>=3.9), version: 1.58.0
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2026-10-19T04:59:34,906   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.7.5-py3-none-any.whl#sha256=f3665219b1bcaa25b4988a796975a18d4ab15a5549f38c55444f8d426eb51978 (from https://www.piwheels.org/simple/isovar/)
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2026-10-19T04:59:34,909   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.6.1-py3-none-any.whl#sha256=a67ea479f0c73cc43fde0d35c8801f6ed3c81f062476dbaf39b5c410c0ba4b7d (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,910   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.6.0-py3-none-any.whl#sha256=37e7cace0e90e2ad432e97fbb4eea705b840edb66fd89ac70f50baf1f7f5d24b (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,910   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.5.2-py3-none-any.whl#sha256=c3a0efab34c6879d8e0c15b80481b591c5ea319601fee4147e28a109ca338c1e (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,911   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.5.0-py3-none-any.whl#sha256=83ba7764960fac3b11d56deee3d616800d6833d1c57f7418d852a04e4f0e93e7 (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,911   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.4.0-py3-none-any.whl#sha256=9cfc7274f39f4f218d25eaaaa6ba235cf6a7b457dcc3997ca42322a8fe84bf17 (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,912   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.4-py3-none-any.whl#sha256=f55b72c484b8bee6bccbb03dd42ba7ab433b3fa89a5c4c5b575b3b26b870e4f0 (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,913   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.3-py3-none-any.whl#sha256=f12eae279834045a239b4762d1849c44173b29617a7858de5ead71a13d1f39cc (from https://www.piwheels.org/simple/isovar/)
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2026-10-19T04:59:34,914   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.2.1-py3-none-any.whl#sha256=a027a8f2bb06d45c573a79bfec0ed8dce083f9120aec3e91482dc74401039e46 (from https://www.piwheels.org/simple/isovar/)
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2026-10-19T04:59:34,915   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.5-py3-none-any.whl#sha256=ba9438ba3b8c2a1e59345d0c9fbfb207ded65feaf93b8d4dbf0972c7de89035c (from https://www.piwheels.org/simple/isovar/)
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2026-10-19T04:59:34,916   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.1.0-py3-none-any.whl#sha256=272454342ccc3da1af19007ad496e6d33165a4482470cef97f1e1bd4a898aee8 (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,916   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.6-py3-none-any.whl#sha256=04d869c163e51c11ed2d2bb125bffaf7e0c89cb17d906bcbc52914d1fa888e72 (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,917   Skipping link: No binaries permitted for isovar: https://archive1.piwheels.org/simple/isovar/isovar-0.0.5-py3-none-any.whl#sha256=57d3b95575aae8439f0aaa54ce12c1cb00b1bcb2e4fec582550cb0484903bcbc (from https://www.piwheels.org/simple/isovar/)
2026-10-19T04:59:34,918 Skipping link: not a file: https://www.piwheels.org/simple/isovar/
2026-10-19T04:59:34,918 Skipping link: not a file: https://pypi.org/simple/isovar/
2026-10-19T04:59:34,980 Given no hashes to check 1 links for project 'isovar': discarding no candidates
2026-10-19T04:59:35,008 Collecting isovar==1.57.2
2026-10-19T04:59:35,011   Created temporary directory: /tmp/pip-unpack-zf3fy1yv
2026-10-19T04:59:35,168   Downloading isovar-1.57.2.tar.gz (12.2 MB)
2026-10-19T04:59:38,368   Added isovar==1.57.2 from https://files.pythonhosted.org/packages/11/ed/2fff120cc745589374ab419b008bab48bdc04dbd9bbe5a91eec6f6153515/isovar-1.57.2.tar.gz to build tracker '/tmp/pip-build-tracker-ydu437ai'
2026-10-19T04:59:38,373   Created temporary directory: /tmp/pip-build-env-4_2b58yz
2026-10-19T04:59:38,378   Installing build dependencies: started
2026-10-19T04:59:38,379   Running command pip subprocess to install build dependencies
2026-10-19T04:59:39,783   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-10-19T04:59:40,254   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-10-19T04:59:40,277   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-10-19T04:59:42,075   Collecting setuptools>=77
2026-10-19T04:59:42,076     Obtaining dependency information for setuptools>=77 from https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata
2026-10-19T04:59:42,090     Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-10-19T04:59:42,335   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-19T04:59:42,435   Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.0.0-py3-none-any.whl (818 kB)
2026-10-19T04:59:45,228   Installing collected packages: setuptools
2026-10-19T04:59:47,744   Successfully installed setuptools-84.0.0
2026-10-19T04:59:48,010   Installing build dependencies: finished with status 'done'
2026-10-19T04:59:48,017   Getting requirements to build wheel: started
2026-10-19T04:59:48,018   Running command Getting requirements to build wheel
2026-10-19T04:59:48,735   running egg_info
2026-10-19T04:59:48,741   writing isovar.egg-info/PKG-INFO
2026-10-19T04:59:48,746   writing dependency_links to isovar.egg-info/dependency_links.txt
2026-10-19T04:59:48,749   writing entry points to isovar.egg-info/entry_points.txt
2026-10-19T04:59:48,752   writing requirements to isovar.egg-info/requires.txt
2026-10-19T04:59:48,753   writing top-level names to isovar.egg-info/top_level.txt
2026-10-19T04:59:48,799   reading manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:48,825   reading manifest template 'MANIFEST.in'
2026-10-19T04:59:48,892   adding license file 'LICENSE'
2026-10-19T04:59:48,915   writing manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:49,017   Getting requirements to build wheel: finished with status 'done'
2026-10-19T04:59:49,020   Created temporary directory: /tmp/pip-modern-metadata-0__00n4h
2026-10-19T04:59:49,023   Preparing metadata (pyproject.toml): started
2026-10-19T04:59:49,024   Running command Preparing metadata (pyproject.toml)
2026-10-19T04:59:49,683   running dist_info
2026-10-19T04:59:49,694   creating /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info
2026-10-19T04:59:49,695   writing /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/PKG-INFO
2026-10-19T04:59:49,701   writing dependency_links to /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/dependency_links.txt
2026-10-19T04:59:49,703   writing entry points to /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/entry_points.txt
2026-10-19T04:59:49,706   writing requirements to /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/requires.txt
2026-10-19T04:59:49,707   writing top-level names to /tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/top_level.txt
2026-10-19T04:59:49,708   writing manifest file '/tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:49,752   reading manifest file '/tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:49,753   reading manifest template 'MANIFEST.in'
2026-10-19T04:59:49,820   adding license file 'LICENSE'
2026-10-19T04:59:49,837   writing manifest file '/tmp/pip-modern-metadata-0__00n4h/isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:49,839   creating '/tmp/pip-modern-metadata-0__00n4h/isovar-1.57.2.dist-info'
2026-10-19T04:59:49,964   Preparing metadata (pyproject.toml): finished with status 'done'
2026-10-19T04:59:49,969   Source in /tmp/pip-wheel-dzgzzlcj/isovar_465e6998a3ab4032bbbe661df5463528 has version 1.57.2, which satisfies requirement isovar==1.57.2 from https://files.pythonhosted.org/packages/11/ed/2fff120cc745589374ab419b008bab48bdc04dbd9bbe5a91eec6f6153515/isovar-1.57.2.tar.gz
2026-10-19T04:59:49,970   Removed isovar==1.57.2 from https://files.pythonhosted.org/packages/11/ed/2fff120cc745589374ab419b008bab48bdc04dbd9bbe5a91eec6f6153515/isovar-1.57.2.tar.gz from build tracker '/tmp/pip-build-tracker-ydu437ai'
2026-10-19T04:59:49,978 Created temporary directory: /tmp/pip-unpack-evft7hi7
2026-10-19T04:59:49,978 Building wheels for collected packages: isovar
2026-10-19T04:59:49,983   Created temporary directory: /tmp/pip-wheel-8zmfbj75
2026-10-19T04:59:49,983   Destination directory: /tmp/pip-wheel-8zmfbj75
2026-10-19T04:59:49,985   Building wheel for isovar (pyproject.toml): started
2026-10-19T04:59:49,986   Running command Building wheel for isovar (pyproject.toml)
2026-10-19T04:59:50,659   running bdist_wheel
2026-10-19T04:59:50,677   running build
2026-10-19T04:59:50,677   running build_py
2026-10-19T04:59:50,685   creating build/lib/isovar
2026-10-19T04:59:50,687   copying isovar/sv_rna_dense.py -> build/lib/isovar
2026-10-19T04:59:50,690   copying isovar/__init__.py -> build/lib/isovar
2026-10-19T04:59:50,692   copying isovar/read_collector.py -> build/lib/isovar
2026-10-19T04:59:50,695   copying isovar/read_evidence.py -> build/lib/isovar
2026-10-19T04:59:50,697   copying isovar/main.py -> build/lib/isovar
2026-10-19T04:59:50,699   copying isovar/string_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,701   copying isovar/read_end_inference.py -> build/lib/isovar
2026-10-19T04:59:50,704   copying isovar/locus_read.py -> build/lib/isovar
2026-10-19T04:59:50,706   copying isovar/read_identity.py -> build/lib/isovar
2026-10-19T04:59:50,708   copying isovar/_audit_checkpoint.py -> build/lib/isovar
2026-10-19T04:59:50,710   copying isovar/filtering.py -> build/lib/isovar
2026-10-19T04:59:50,713   copying isovar/sv_rna_orfs.py -> build/lib/isovar
2026-10-19T04:59:50,715   copying isovar/read_metadata.py -> build/lib/isovar
2026-10-19T04:59:50,717   copying isovar/antigen_reference.py -> build/lib/isovar
2026-10-19T04:59:50,719   copying isovar/protein_hypotheses.py -> build/lib/isovar
2026-10-19T04:59:50,721   copying isovar/mutant_transcript_source.py -> build/lib/isovar
2026-10-19T04:59:50,723   copying isovar/variant_sequence_creator.py -> build/lib/isovar
2026-10-19T04:59:50,726   copying isovar/base_quality.py -> build/lib/isovar
2026-10-19T04:59:50,728   copying isovar/genetic_code.py -> build/lib/isovar
2026-10-19T04:59:50,730   copying isovar/protein_sequence_creator.py -> build/lib/isovar
2026-10-19T04:59:50,733   copying isovar/allele_interpretations.py -> build/lib/isovar
2026-10-19T04:59:50,735   copying isovar/__main__.py -> build/lib/isovar
2026-10-19T04:59:50,737   copying isovar/effect_prediction.py -> build/lib/isovar
2026-10-19T04:59:50,739   copying isovar/sv_rna_stream.py -> build/lib/isovar
2026-10-19T04:59:50,741   copying isovar/sv_rna_orf_export.py -> build/lib/isovar
2026-10-19T04:59:50,744   copying isovar/read_lineage.py -> build/lib/isovar
2026-10-19T04:59:50,746   copying isovar/variant_orf.py -> build/lib/isovar
2026-10-19T04:59:50,748   copying isovar/read_phasing.py -> build/lib/isovar
2026-10-19T04:59:50,751   copying isovar/isovar_result.py -> build/lib/isovar
2026-10-19T04:59:50,754   copying isovar/reference_sequence_key.py -> build/lib/isovar
2026-10-19T04:59:50,756   copying isovar/transcript_assembly_edit.py -> build/lib/isovar
2026-10-19T04:59:50,758   copying isovar/germline_evidence.py -> build/lib/isovar
2026-10-19T04:59:50,760   copying isovar/isoform_quantification.py -> build/lib/isovar
2026-10-19T04:59:50,762   copying isovar/sid_audit_bundle.py -> build/lib/isovar
2026-10-19T04:59:50,765   copying isovar/allele_read_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,767   copying isovar/reference_coding_sequence_key.py -> build/lib/isovar
2026-10-19T04:59:50,769   copying isovar/dataframe_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,771   copying isovar/variant_orf_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,774   copying isovar/reference_context_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,775   copying isovar/cell_reconstruction.py -> build/lib/isovar
2026-10-19T04:59:50,778   copying isovar/rna_candidate_support.py -> build/lib/isovar
2026-10-19T04:59:50,780   copying isovar/phase_group.py -> build/lib/isovar
2026-10-19T04:59:50,782   copying isovar/common.py -> build/lib/isovar
2026-10-19T04:59:50,783   copying isovar/value_object.py -> build/lib/isovar
2026-10-19T04:59:50,785   copying isovar/orf_annotation.py -> build/lib/isovar
2026-10-19T04:59:50,787   copying isovar/default_parameters.py -> build/lib/isovar
2026-10-19T04:59:50,789   copying isovar/fusion.py -> build/lib/isovar
2026-10-19T04:59:50,792   copying isovar/sv_rna.py -> build/lib/isovar
2026-10-19T04:59:50,795   copying isovar/allele_read.py -> build/lib/isovar
2026-10-19T04:59:50,798   copying isovar/sv_rna_comparison.py -> build/lib/isovar
2026-10-19T04:59:50,800   copying isovar/protein_sequence_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,802   copying isovar/uorf_annotation.py -> build/lib/isovar
2026-10-19T04:59:50,803   copying isovar/dna.py -> build/lib/isovar
2026-10-19T04:59:50,805   copying isovar/cell_umi.py -> build/lib/isovar
2026-10-19T04:59:50,807   copying isovar/viral_sequences.py -> build/lib/isovar
2026-10-19T04:59:50,810   copying isovar/_audit_json_reader.py -> build/lib/isovar
2026-10-19T04:59:50,812   copying isovar/transcript_compatibility.py -> build/lib/isovar
2026-10-19T04:59:50,814   copying isovar/audit_replay.py -> build/lib/isovar
2026-10-19T04:59:50,816   copying isovar/rna_evidence.py -> build/lib/isovar
2026-10-19T04:59:50,819   copying isovar/uorf_catalog.py -> build/lib/isovar
2026-10-19T04:59:50,821   copying isovar/transcript_edit_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,823   copying isovar/antigen_isoforms.py -> build/lib/isovar
2026-10-19T04:59:50,825   copying isovar/isovar_result_provider.py -> build/lib/isovar
2026-10-19T04:59:50,827   copying isovar/fusion_visualization.py -> build/lib/isovar
2026-10-19T04:59:50,829   copying isovar/chimeric_alignment.py -> build/lib/isovar
2026-10-19T04:59:50,831   copying isovar/_audit_json.py -> build/lib/isovar
2026-10-19T04:59:50,833   copying isovar/sv_rna_relations.py -> build/lib/isovar
2026-10-19T04:59:50,835   copying isovar/rna_reconstruction.py -> build/lib/isovar
2026-10-19T04:59:50,838   copying isovar/protein_sequence.py -> build/lib/isovar
2026-10-19T04:59:50,840   copying isovar/translation.py -> build/lib/isovar
2026-10-19T04:59:50,842   copying isovar/orf_inclusion.py -> build/lib/isovar
2026-10-19T04:59:50,845   copying isovar/dataframe_builder.py -> build/lib/isovar
2026-10-19T04:59:50,847   copying isovar/variant_sequence.py -> build/lib/isovar
2026-10-19T04:59:50,850   copying isovar/initiation_context.py -> build/lib/isovar
2026-10-19T04:59:50,851   copying isovar/audit_bundle.py -> build/lib/isovar
2026-10-19T04:59:50,854   copying isovar/aligned_reference_prefix.py -> build/lib/isovar
2026-10-19T04:59:50,856   copying isovar/logging.py -> build/lib/isovar
2026-10-19T04:59:50,857   copying isovar/assembly.py -> build/lib/isovar
2026-10-19T04:59:50,860   copying isovar/sid_data.py -> build/lib/isovar
2026-10-19T04:59:50,862   copying isovar/viral_coding.py -> build/lib/isovar
2026-10-19T04:59:50,865   copying isovar/translation_key.py -> build/lib/isovar
2026-10-19T04:59:50,867   copying isovar/alignment_score.py -> build/lib/isovar
2026-10-19T04:59:50,868   copying isovar/variant_sequence_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,871   copying isovar/visualization.py -> build/lib/isovar
2026-10-19T04:59:50,873   copying isovar/known_variants.py -> build/lib/isovar
2026-10-19T04:59:50,875   copying isovar/reference_context.py -> build/lib/isovar
2026-10-19T04:59:50,877   copying isovar/translation_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,880   copying isovar/cell_evidence.py -> build/lib/isovar
2026-10-19T04:59:50,882   copying isovar/phasing.py -> build/lib/isovar
2026-10-19T04:59:50,885   copying isovar/orf_start.py -> build/lib/isovar
2026-10-19T04:59:50,887   copying isovar/variant_helpers.py -> build/lib/isovar
2026-10-19T04:59:50,889   copying isovar/protein_comparison.py -> build/lib/isovar
2026-10-19T04:59:50,892   creating build/lib/isovar/cli
2026-10-19T04:59:50,893   copying isovar/cli/__init__.py -> build/lib/isovar/cli
2026-10-19T04:59:50,895   copying isovar/cli/isovar_variant_sequences.py -> build/lib/isovar/cli
2026-10-19T04:59:50,897   copying isovar/cli/isovar_protein_hypotheses.py -> build/lib/isovar/cli
2026-10-19T04:59:50,899   copying isovar/cli/isovar_viral.py -> build/lib/isovar/cli
2026-10-19T04:59:50,900   copying isovar/cli/isovar_main.py -> build/lib/isovar/cli
2026-10-19T04:59:50,902   copying isovar/cli/isovar_allele_counts.py -> build/lib/isovar/cli
2026-10-19T04:59:50,904   copying isovar/cli/output_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,905   copying isovar/cli/isovar_allele_interpretations.py -> build/lib/isovar/cli
2026-10-19T04:59:50,907   copying isovar/cli/isovar_isoforms.py -> build/lib/isovar/cli
2026-10-19T04:59:50,909   copying isovar/cli/isovar_translations.py -> build/lib/isovar/cli
2026-10-19T04:59:50,911   copying isovar/cli/commands.py -> build/lib/isovar/cli
2026-10-19T04:59:50,913   copying isovar/cli/isovar_protein_sequences.py -> build/lib/isovar/cli
2026-10-19T04:59:50,915   copying isovar/cli/filter_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,917   copying isovar/cli/rna_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,919   copying isovar/cli/isovar_plot.py -> build/lib/isovar/cli
2026-10-19T04:59:50,921   copying isovar/cli/reference_context_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,923   copying isovar/cli/isovar_audit_bundle.py -> build/lib/isovar/cli
2026-10-19T04:59:50,925   copying isovar/cli/base_quality_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,927   copying isovar/cli/isovar_sv_rna.py -> build/lib/isovar/cli
2026-10-19T04:59:50,929   copying isovar/cli/isovar_allele_reads.py -> build/lib/isovar/cli
2026-10-19T04:59:50,930   copying isovar/cli/main_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,932   copying isovar/cli/isovar_uorf_evidence.py -> build/lib/isovar/cli
2026-10-19T04:59:50,934   copying isovar/cli/isovar_variant_reads.py -> build/lib/isovar/cli
2026-10-19T04:59:50,936   copying isovar/cli/isovar_reference_contexts.py -> build/lib/isovar/cli
2026-10-19T04:59:50,937   copying isovar/cli/validation.py -> build/lib/isovar/cli
2026-10-19T04:59:50,939   copying isovar/cli/translation_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,942   copying isovar/cli/variant_sequences_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,943   copying isovar/cli/protein_sequence_args.py -> build/lib/isovar/cli
2026-10-19T04:59:50,945   copying isovar/cli/isovar_fusion.py -> build/lib/isovar/cli
2026-10-19T04:59:50,949   running egg_info
2026-10-19T04:59:50,958   writing isovar.egg-info/PKG-INFO
2026-10-19T04:59:50,963   writing dependency_links to isovar.egg-info/dependency_links.txt
2026-10-19T04:59:50,965   writing entry points to isovar.egg-info/entry_points.txt
2026-10-19T04:59:50,968   writing requirements to isovar.egg-info/requires.txt
2026-10-19T04:59:50,969   writing top-level names to isovar.egg-info/top_level.txt
2026-10-19T04:59:51,003   reading manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:51,027   reading manifest template 'MANIFEST.in'
2026-10-19T04:59:51,100   adding license file 'LICENSE'
2026-10-19T04:59:51,122   writing manifest file 'isovar.egg-info/SOURCES.txt'
2026-10-19T04:59:51,156   creating build/lib/isovar/data/sid-reads
2026-10-19T04:59:51,158   copying isovar/data/sid-reads/manifest.json -> build/lib/isovar/data/sid-reads
2026-10-19T04:59:51,364   copying isovar/data/sid-reads/acquisition.json -> build/lib/isovar/data/sid-reads
2026-10-19T04:59:51,367   copying isovar/data/sid-reads/recipe.json -> build/lib/isovar/data/sid-reads
2026-10-19T04:59:51,428   creating build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,429   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,431   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,435   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,438   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,441   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,447   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,469   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,471   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,475   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,479   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,482   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,486   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,488   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,496   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,520   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,526   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,532   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,538   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,542   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,545   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,556   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,559   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,563   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,574   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,577   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,594   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,602   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,606   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,612   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,615   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,623   copying isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,627   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,631   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,640   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,642   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,647   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,651   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,654   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,672   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,675   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,678   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,681   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,684   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,687   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,692   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,709   copying isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,715   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,728   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,732   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,734   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,737   copying isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,740   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,745   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,748   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,756   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,759   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,766   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,769   copying isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,777   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,780   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,789   copying isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,792   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,795   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,797   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,800   copying isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,806   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,810   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,822   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,835   copying isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,840   copying isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,843   copying isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,846   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,849   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,858   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,862   copying isovar/data/sid-reads/sources/c300dbf41837763346768069.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,865   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,867   copying isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,870   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,908   copying isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,911   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,918   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,921   copying isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,932   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,936   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,939   copying isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,941   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,945   copying isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,957   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,959   copying isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,962   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,967   copying isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,971   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,982   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,986   copying isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,989   copying isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:51,995   copying isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,004   copying isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,008   copying isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,011   copying isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,018   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,022   copying isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,026   copying isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,028   copying isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,033   copying isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,036   copying isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,040   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,047   copying isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,052   copying isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,059   copying isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,062   copying isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,067   copying isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,070   copying isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,079   copying isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,082   copying isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,085   copying isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,090   copying isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,093   copying isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json -> build/lib/isovar/data/sid-reads/sources
2026-10-19T04:59:52,104   creating build/lib/isovar/data/references
2026-10-19T04:59:52,105   copying isovar/data/references/gdc-grch38.d1.vd1.json -> build/lib/isovar/data/references
2026-10-19T04:59:52,112   copying isovar/data/references/gdc-grch38.d1.vd1-viruses.json -> build/lib/isovar/data/references
2026-10-19T04:59:52,177   installing to build/bdist.linux-armv7l/wheel
2026-10-19T04:59:52,178   running install
2026-10-19T04:59:52,200   running install_lib
2026-10-19T04:59:52,206   creating build/bdist.linux-armv7l/wheel
2026-10-19T04:59:52,209   creating build/bdist.linux-armv7l/wheel/isovar
2026-10-19T04:59:52,211   copying build/lib/isovar/sv_rna_dense.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,214   copying build/lib/isovar/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,216   copying build/lib/isovar/read_collector.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,219   copying build/lib/isovar/read_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,221   copying build/lib/isovar/main.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,223   copying build/lib/isovar/string_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,225   copying build/lib/isovar/read_end_inference.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,227   copying build/lib/isovar/locus_read.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,229   copying build/lib/isovar/read_identity.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,231   copying build/lib/isovar/_audit_checkpoint.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,233   copying build/lib/isovar/filtering.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,236   copying build/lib/isovar/sv_rna_orfs.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,238   copying build/lib/isovar/read_metadata.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,240   copying build/lib/isovar/antigen_reference.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,242   copying build/lib/isovar/protein_hypotheses.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,244   copying build/lib/isovar/mutant_transcript_source.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,246   copying build/lib/isovar/variant_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,248   copying build/lib/isovar/base_quality.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,250   copying build/lib/isovar/genetic_code.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,252   copying build/lib/isovar/protein_sequence_creator.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,255   copying build/lib/isovar/allele_interpretations.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,257   copying build/lib/isovar/__main__.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,259   copying build/lib/isovar/effect_prediction.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,261   copying build/lib/isovar/sv_rna_stream.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,263   copying build/lib/isovar/sv_rna_orf_export.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,266   copying build/lib/isovar/read_lineage.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,269   creating build/bdist.linux-armv7l/wheel/isovar/cli
2026-10-19T04:59:52,270   copying build/lib/isovar/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,272   copying build/lib/isovar/cli/isovar_variant_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,274   copying build/lib/isovar/cli/isovar_protein_hypotheses.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,276   copying build/lib/isovar/cli/isovar_viral.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,278   copying build/lib/isovar/cli/isovar_main.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,280   copying build/lib/isovar/cli/isovar_allele_counts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,282   copying build/lib/isovar/cli/output_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,284   copying build/lib/isovar/cli/isovar_allele_interpretations.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,285   copying build/lib/isovar/cli/isovar_isoforms.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,288   copying build/lib/isovar/cli/isovar_translations.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,290   copying build/lib/isovar/cli/commands.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,292   copying build/lib/isovar/cli/isovar_protein_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,294   copying build/lib/isovar/cli/filter_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,295   copying build/lib/isovar/cli/rna_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,298   copying build/lib/isovar/cli/isovar_plot.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,300   copying build/lib/isovar/cli/reference_context_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,302   copying build/lib/isovar/cli/isovar_audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,304   copying build/lib/isovar/cli/base_quality_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,305   copying build/lib/isovar/cli/isovar_sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,308   copying build/lib/isovar/cli/isovar_allele_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,309   copying build/lib/isovar/cli/main_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,312   copying build/lib/isovar/cli/isovar_uorf_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,313   copying build/lib/isovar/cli/isovar_variant_reads.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,315   copying build/lib/isovar/cli/isovar_reference_contexts.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,317   copying build/lib/isovar/cli/validation.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,319   copying build/lib/isovar/cli/translation_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,322   copying build/lib/isovar/cli/variant_sequences_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,324   copying build/lib/isovar/cli/protein_sequence_args.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,326   copying build/lib/isovar/cli/isovar_fusion.py -> build/bdist.linux-armv7l/wheel/./isovar/cli
2026-10-19T04:59:52,328   copying build/lib/isovar/variant_orf.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,330   copying build/lib/isovar/read_phasing.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,332   copying build/lib/isovar/isovar_result.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,335   copying build/lib/isovar/reference_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,338   copying build/lib/isovar/transcript_assembly_edit.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,340   copying build/lib/isovar/germline_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,342   copying build/lib/isovar/isoform_quantification.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,344   copying build/lib/isovar/sid_audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,347   copying build/lib/isovar/allele_read_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,349   copying build/lib/isovar/reference_coding_sequence_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,351   copying build/lib/isovar/dataframe_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,354   copying build/lib/isovar/variant_orf_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,356   copying build/lib/isovar/reference_context_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,357   copying build/lib/isovar/cell_reconstruction.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,360   copying build/lib/isovar/rna_candidate_support.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,362   copying build/lib/isovar/phase_group.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,364   copying build/lib/isovar/common.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,366   copying build/lib/isovar/value_object.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,368   copying build/lib/isovar/orf_annotation.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,370   copying build/lib/isovar/default_parameters.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,372   copying build/lib/isovar/fusion.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,375   copying build/lib/isovar/sv_rna.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,379   copying build/lib/isovar/allele_read.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,381   copying build/lib/isovar/sv_rna_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,383   copying build/lib/isovar/protein_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,385   copying build/lib/isovar/uorf_annotation.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,387   copying build/lib/isovar/dna.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,388   copying build/lib/isovar/cell_umi.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,391   copying build/lib/isovar/viral_sequences.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,393   copying build/lib/isovar/_audit_json_reader.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,395   copying build/lib/isovar/transcript_compatibility.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:52,398   creating build/bdist.linux-armv7l/wheel/isovar/data
2026-10-19T04:59:52,399   creating build/bdist.linux-armv7l/wheel/isovar/data/sid-reads
2026-10-19T04:59:52,401   copying build/lib/isovar/data/sid-reads/manifest.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-19T04:59:52,580   copying build/lib/isovar/data/sid-reads/acquisition.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-19T04:59:52,586   creating build/bdist.linux-armv7l/wheel/isovar/data/sid-reads/sources
2026-10-19T04:59:52,587   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,590   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,593   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,596   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,599   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,605   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,626   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,629   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,632   copying build/lib/isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,635   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,639   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,645   copying build/lib/isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,648   copying build/lib/isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,658   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,692   copying build/lib/isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,702   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,709   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,719   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,723   copying build/lib/isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,727   copying build/lib/isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,741   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,744   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,749   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,761   copying build/lib/isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,767   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,784   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,790   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,793   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,797   copying build/lib/isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,800   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,807   copying build/lib/isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,810   copying build/lib/isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,813   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,820   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,822   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,825   copying build/lib/isovar/data/sid-reads/sources/c300dbf41837763346768069.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,828   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,830   copying build/lib/isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,842   copying build/lib/isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,845   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,848   copying build/lib/isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,851   copying build/lib/isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,854   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,857   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,863   copying build/lib/isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,882   copying build/lib/isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,887   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,897   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,901   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,904   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,907   copying build/lib/isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,911   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,916   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,919   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,926   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,929   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,936   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,939   copying build/lib/isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,948   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,950   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,959   copying build/lib/isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,962   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,964   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,967   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,969   copying build/lib/isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,975   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,979   copying build/lib/isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:52,991   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,001   copying build/lib/isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,004   copying build/lib/isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,007   copying build/lib/isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,010   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,012   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,020   copying build/lib/isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,023   copying build/lib/isovar/data/sid-reads/sources/c300dbf41837763346768069.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,026   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,029   copying build/lib/isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,031   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,080   copying build/lib/isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,083   copying build/lib/isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,090   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,093   copying build/lib/isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,105   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,108   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,111   copying build/lib/isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,113   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,116   copying build/lib/isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,127   copying build/lib/isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,129   copying build/lib/isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,132   copying build/lib/isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,136   copying build/lib/isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,140   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,150   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,153   copying build/lib/isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,156   copying build/lib/isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,162   copying build/lib/isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,175   copying build/lib/isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,179   copying build/lib/isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,182   copying build/lib/isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,191   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,194   copying build/lib/isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,198   copying build/lib/isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,201   copying build/lib/isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,205   copying build/lib/isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,207   copying build/lib/isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,211   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,217   copying build/lib/isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,222   copying build/lib/isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,227   copying build/lib/isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,229   copying build/lib/isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,234   copying build/lib/isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,236   copying build/lib/isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,245   copying build/lib/isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,248   copying build/lib/isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,250   copying build/lib/isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,256   copying build/lib/isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,258   copying build/lib/isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads/sources
2026-10-19T04:59:53,270   copying build/lib/isovar/data/sid-reads/recipe.json -> build/bdist.linux-armv7l/wheel/./isovar/data/sid-reads
2026-10-19T04:59:53,343   creating build/bdist.linux-armv7l/wheel/isovar/data/references
2026-10-19T04:59:53,344   copying build/lib/isovar/data/references/gdc-grch38.d1.vd1.json -> build/bdist.linux-armv7l/wheel/./isovar/data/references
2026-10-19T04:59:53,351   copying build/lib/isovar/data/references/gdc-grch38.d1.vd1-viruses.json -> build/bdist.linux-armv7l/wheel/./isovar/data/references
2026-10-19T04:59:53,354   copying build/lib/isovar/audit_replay.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,356   copying build/lib/isovar/rna_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,359   copying build/lib/isovar/uorf_catalog.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,361   copying build/lib/isovar/transcript_edit_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,363   copying build/lib/isovar/antigen_isoforms.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,366   copying build/lib/isovar/isovar_result_provider.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,367   copying build/lib/isovar/fusion_visualization.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,370   copying build/lib/isovar/chimeric_alignment.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,372   copying build/lib/isovar/_audit_json.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,374   copying build/lib/isovar/sv_rna_relations.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,376   copying build/lib/isovar/rna_reconstruction.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,379   copying build/lib/isovar/protein_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,381   copying build/lib/isovar/translation.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,383   copying build/lib/isovar/orf_inclusion.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,386   copying build/lib/isovar/dataframe_builder.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,388   copying build/lib/isovar/variant_sequence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,391   copying build/lib/isovar/initiation_context.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,393   copying build/lib/isovar/audit_bundle.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,396   copying build/lib/isovar/aligned_reference_prefix.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,398   copying build/lib/isovar/logging.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,400   copying build/lib/isovar/assembly.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,403   copying build/lib/isovar/sid_data.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,406   copying build/lib/isovar/viral_coding.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,408   copying build/lib/isovar/translation_key.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,411   copying build/lib/isovar/alignment_score.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,413   copying build/lib/isovar/variant_sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,416   copying build/lib/isovar/visualization.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,419   copying build/lib/isovar/known_variants.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,421   copying build/lib/isovar/reference_context.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,424   copying build/lib/isovar/translation_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,426   copying build/lib/isovar/cell_evidence.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,429   copying build/lib/isovar/phasing.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,432   copying build/lib/isovar/orf_start.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,435   copying build/lib/isovar/variant_helpers.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,437   copying build/lib/isovar/protein_comparison.py -> build/bdist.linux-armv7l/wheel/./isovar
2026-10-19T04:59:53,440   running install_egg_info
2026-10-19T04:59:53,445   Copying isovar.egg-info to build/bdist.linux-armv7l/wheel/./isovar-1.57.2-py3.11.egg-info
2026-10-19T04:59:53,460   running install_scripts
2026-10-19T04:59:53,477   creating build/bdist.linux-armv7l/wheel/isovar-1.57.2.dist-info/WHEEL
2026-10-19T04:59:53,481   creating '/tmp/pip-wheel-8zmfbj75/.tmp-wzat5yiz/isovar-1.57.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-10-19T04:59:53,487   adding 'isovar/__init__.py'
2026-10-19T04:59:53,489   adding 'isovar/__main__.py'
2026-10-19T04:59:53,491   adding 'isovar/_audit_checkpoint.py'
2026-10-19T04:59:53,494   adding 'isovar/_audit_json.py'
2026-10-19T04:59:53,497   adding 'isovar/_audit_json_reader.py'
2026-10-19T04:59:53,500   adding 'isovar/aligned_reference_prefix.py'
2026-10-19T04:59:53,503   adding 'isovar/alignment_score.py'
2026-10-19T04:59:53,507   adding 'isovar/allele_interpretations.py'
2026-10-19T04:59:53,510   adding 'isovar/allele_read.py'
2026-10-19T04:59:53,513   adding 'isovar/allele_read_helpers.py'
2026-10-19T04:59:53,516   adding 'isovar/antigen_isoforms.py'
2026-10-19T04:59:53,520   adding 'isovar/antigen_reference.py'
2026-10-19T04:59:53,523   adding 'isovar/assembly.py'
2026-10-19T04:59:53,527   adding 'isovar/audit_bundle.py'
2026-10-19T04:59:53,530   adding 'isovar/audit_replay.py'
2026-10-19T04:59:53,533   adding 'isovar/base_quality.py'
2026-10-19T04:59:53,536   adding 'isovar/cell_evidence.py'
2026-10-19T04:59:53,539   adding 'isovar/cell_reconstruction.py'
2026-10-19T04:59:53,542   adding 'isovar/cell_umi.py'
2026-10-19T04:59:53,544   adding 'isovar/chimeric_alignment.py'
2026-10-19T04:59:53,546   adding 'isovar/common.py'
2026-10-19T04:59:53,548   adding 'isovar/dataframe_builder.py'
2026-10-19T04:59:53,550   adding 'isovar/dataframe_helpers.py'
2026-10-19T04:59:53,553   adding 'isovar/default_parameters.py'
2026-10-19T04:59:53,555   adding 'isovar/dna.py'
2026-10-19T04:59:53,556   adding 'isovar/effect_prediction.py'
2026-10-19T04:59:53,558   adding 'isovar/filtering.py'
2026-10-19T04:59:53,561   adding 'isovar/fusion.py'
2026-10-19T04:59:53,563   adding 'isovar/fusion_visualization.py'
2026-10-19T04:59:53,565   adding 'isovar/genetic_code.py'
2026-10-19T04:59:53,567   adding 'isovar/germline_evidence.py'
2026-10-19T04:59:53,568   adding 'isovar/initiation_context.py'
2026-10-19T04:59:53,571   adding 'isovar/isoform_quantification.py'
2026-10-19T04:59:53,575   adding 'isovar/isovar_result.py'
2026-10-19T04:59:53,576   adding 'isovar/isovar_result_provider.py'
2026-10-19T04:59:53,578   adding 'isovar/known_variants.py'
2026-10-19T04:59:53,579   adding 'isovar/locus_read.py'
2026-10-19T04:59:53,580   adding 'isovar/logging.py'
2026-10-19T04:59:53,582   adding 'isovar/main.py'
2026-10-19T04:59:53,584   adding 'isovar/mutant_transcript_source.py'
2026-10-19T04:59:53,585   adding 'isovar/orf_annotation.py'
2026-10-19T04:59:53,587   adding 'isovar/orf_inclusion.py'
2026-10-19T04:59:53,589   adding 'isovar/orf_start.py'
2026-10-19T04:59:53,591   adding 'isovar/phase_group.py'
2026-10-19T04:59:53,593   adding 'isovar/phasing.py'
2026-10-19T04:59:53,595   adding 'isovar/protein_comparison.py'
2026-10-19T04:59:53,598   adding 'isovar/protein_hypotheses.py'
2026-10-19T04:59:53,601   adding 'isovar/protein_sequence.py'
2026-10-19T04:59:53,604   adding 'isovar/protein_sequence_creator.py'
2026-10-19T04:59:53,605   adding 'isovar/protein_sequence_helpers.py'
2026-10-19T04:59:53,612   adding 'isovar/read_collector.py'
2026-10-19T04:59:53,614   adding 'isovar/read_end_inference.py'
2026-10-19T04:59:53,616   adding 'isovar/read_evidence.py'
2026-10-19T04:59:53,617   adding 'isovar/read_identity.py'
2026-10-19T04:59:53,619   adding 'isovar/read_lineage.py'
2026-10-19T04:59:53,620   adding 'isovar/read_metadata.py'
2026-10-19T04:59:53,623   adding 'isovar/read_phasing.py'
2026-10-19T04:59:53,625   adding 'isovar/reference_coding_sequence_key.py'
2026-10-19T04:59:53,626   adding 'isovar/reference_context.py'
2026-10-19T04:59:53,627   adding 'isovar/reference_context_helpers.py'
2026-10-19T04:59:53,629   adding 'isovar/reference_sequence_key.py'
2026-10-19T04:59:53,631   adding 'isovar/rna_candidate_support.py'
2026-10-19T04:59:53,633   adding 'isovar/rna_evidence.py'
2026-10-19T04:59:53,635   adding 'isovar/rna_reconstruction.py'
2026-10-19T04:59:53,637   adding 'isovar/sid_audit_bundle.py'
2026-10-19T04:59:53,640   adding 'isovar/sid_data.py'
2026-10-19T04:59:53,642   adding 'isovar/string_helpers.py'
2026-10-19T04:59:53,657   adding 'isovar/sv_rna.py'
2026-10-19T04:59:53,659   adding 'isovar/sv_rna_comparison.py'
2026-10-19T04:59:53,662   adding 'isovar/sv_rna_dense.py'
2026-10-19T04:59:53,665   adding 'isovar/sv_rna_orf_export.py'
2026-10-19T04:59:53,667   adding 'isovar/sv_rna_orfs.py'
2026-10-19T04:59:53,669   adding 'isovar/sv_rna_relations.py'
2026-10-19T04:59:53,670   adding 'isovar/sv_rna_stream.py'
2026-10-19T04:59:53,672   adding 'isovar/transcript_assembly_edit.py'
2026-10-19T04:59:53,673   adding 'isovar/transcript_compatibility.py'
2026-10-19T04:59:53,675   adding 'isovar/transcript_edit_helpers.py'
2026-10-19T04:59:53,677   adding 'isovar/translation.py'
2026-10-19T04:59:53,678   adding 'isovar/translation_helpers.py'
2026-10-19T04:59:53,679   adding 'isovar/translation_key.py'
2026-10-19T04:59:53,681   adding 'isovar/uorf_annotation.py'
2026-10-19T04:59:53,682   adding 'isovar/uorf_catalog.py'
2026-10-19T04:59:53,683   adding 'isovar/value_object.py'
2026-10-19T04:59:53,685   adding 'isovar/variant_helpers.py'
2026-10-19T04:59:53,687   adding 'isovar/variant_orf.py'
2026-10-19T04:59:53,688   adding 'isovar/variant_orf_helpers.py'
2026-10-19T04:59:53,690   adding 'isovar/variant_sequence.py'
2026-10-19T04:59:53,692   adding 'isovar/variant_sequence_creator.py'
2026-10-19T04:59:53,694   adding 'isovar/variant_sequence_helpers.py'
2026-10-19T04:59:53,696   adding 'isovar/viral_coding.py'
2026-10-19T04:59:53,698   adding 'isovar/viral_sequences.py'
2026-10-19T04:59:53,703   adding 'isovar/visualization.py'
2026-10-19T04:59:53,706   adding 'isovar/cli/__init__.py'
2026-10-19T04:59:53,707   adding 'isovar/cli/base_quality_args.py'
2026-10-19T04:59:53,708   adding 'isovar/cli/commands.py'
2026-10-19T04:59:53,710   adding 'isovar/cli/filter_args.py'
2026-10-19T04:59:53,711   adding 'isovar/cli/isovar_allele_counts.py'
2026-10-19T04:59:53,713   adding 'isovar/cli/isovar_allele_interpretations.py'
2026-10-19T04:59:53,714   adding 'isovar/cli/isovar_allele_reads.py'
2026-10-19T04:59:53,715   adding 'isovar/cli/isovar_audit_bundle.py'
2026-10-19T04:59:53,717   adding 'isovar/cli/isovar_fusion.py'
2026-10-19T04:59:53,718   adding 'isovar/cli/isovar_isoforms.py'
2026-10-19T04:59:53,720   adding 'isovar/cli/isovar_main.py'
2026-10-19T04:59:53,721   adding 'isovar/cli/isovar_plot.py'
2026-10-19T04:59:53,723   adding 'isovar/cli/isovar_protein_hypotheses.py'
2026-10-19T04:59:53,724   adding 'isovar/cli/isovar_protein_sequences.py'
2026-10-19T04:59:53,725   adding 'isovar/cli/isovar_reference_contexts.py'
2026-10-19T04:59:53,727   adding 'isovar/cli/isovar_sv_rna.py'
2026-10-19T04:59:53,728   adding 'isovar/cli/isovar_translations.py'
2026-10-19T04:59:53,729   adding 'isovar/cli/isovar_uorf_evidence.py'
2026-10-19T04:59:53,731   adding 'isovar/cli/isovar_variant_reads.py'
2026-10-19T04:59:53,732   adding 'isovar/cli/isovar_variant_sequences.py'
2026-10-19T04:59:53,733   adding 'isovar/cli/isovar_viral.py'
2026-10-19T04:59:53,735   adding 'isovar/cli/main_args.py'
2026-10-19T04:59:53,736   adding 'isovar/cli/output_args.py'
2026-10-19T04:59:53,738   adding 'isovar/cli/protein_sequence_args.py'
2026-10-19T04:59:53,739   adding 'isovar/cli/reference_context_args.py'
2026-10-19T04:59:53,741   adding 'isovar/cli/rna_args.py'
2026-10-19T04:59:53,742   adding 'isovar/cli/translation_args.py'
2026-10-19T04:59:53,744   adding 'isovar/cli/validation.py'
2026-10-19T04:59:53,745   adding 'isovar/cli/variant_sequences_args.py'
2026-10-19T04:59:53,750   adding 'isovar/data/references/gdc-grch38.d1.vd1-viruses.json'
2026-10-19T04:59:53,774   adding 'isovar/data/references/gdc-grch38.d1.vd1.json'
2026-10-19T04:59:53,778   adding 'isovar/data/sid-reads/acquisition.json'
2026-10-19T04:59:54,801   adding 'isovar/data/sid-reads/manifest.json'
2026-10-19T04:59:55,281   adding 'isovar/data/sid-reads/recipe.json'
2026-10-19T04:59:55,315   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam'
2026-10-19T04:59:55,318   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.bam.bai'
2026-10-19T04:59:55,331   adding 'isovar/data/sid-reads/sources/1281e68167d4640a28783c86.header.json'
2026-10-19T04:59:55,335   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam'
2026-10-19T04:59:55,337   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.bam.bai'
2026-10-19T04:59:55,338   adding 'isovar/data/sid-reads/sources/196160e703256c72b0bc992a.header.json'
2026-10-19T04:59:55,363   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam'
2026-10-19T04:59:55,368   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.bam.bai'
2026-10-19T04:59:55,458   adding 'isovar/data/sid-reads/sources/1a15d327795549218ce7bc0c.header.json'
2026-10-19T04:59:55,481   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam'
2026-10-19T04:59:55,487   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.bam.bai'
2026-10-19T04:59:55,499   adding 'isovar/data/sid-reads/sources/243e782bf97435eea70f232e.header.json'
2026-10-19T04:59:55,502   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam'
2026-10-19T04:59:55,504   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.bam.bai'
2026-10-19T04:59:55,506   adding 'isovar/data/sid-reads/sources/265041205af7f5cc602c2974.header.json'
2026-10-19T04:59:55,512   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam'
2026-10-19T04:59:55,515   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.bam.bai'
2026-10-19T04:59:55,528   adding 'isovar/data/sid-reads/sources/267b188d2a83878d8f3111cd.header.json'
2026-10-19T04:59:55,536   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam'
2026-10-19T04:59:55,538   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.bam.bai'
2026-10-19T04:59:55,541   adding 'isovar/data/sid-reads/sources/2e483cace99a132ded3c587d.header.json'
2026-10-19T04:59:55,560   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam'
2026-10-19T04:59:55,572   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.bam.bai'
2026-10-19T04:59:55,584   adding 'isovar/data/sid-reads/sources/2fbe9621deba29303b76d5ec.header.json'
2026-10-19T04:59:55,590   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam'
2026-10-19T04:59:55,592   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.bam.bai'
2026-10-19T04:59:55,593   adding 'isovar/data/sid-reads/sources/5fa9b1916c9e42ed2128c9b3.header.json'
2026-10-19T04:59:55,608   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam'
2026-10-19T04:59:55,617   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.bam.bai'
2026-10-19T04:59:55,621   adding 'isovar/data/sid-reads/sources/60595081adfd6f6685795616.header.json'
2026-10-19T04:59:55,623   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam'
2026-10-19T04:59:55,624   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.bam.bai'
2026-10-19T04:59:55,625   adding 'isovar/data/sid-reads/sources/63fc83ca6a5431eae770f213.header.json'
2026-10-19T04:59:55,629   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam'
2026-10-19T04:59:55,634   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.bam.bai'
2026-10-19T04:59:55,649   adding 'isovar/data/sid-reads/sources/6f23b9ee5c3945e86572eb66.header.json'
2026-10-19T04:59:55,654   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam'
2026-10-19T04:59:55,656   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.bam.bai'
2026-10-19T04:59:55,658   adding 'isovar/data/sid-reads/sources/7fcb28927c9f6862c096887e.header.json'
2026-10-19T04:59:55,660   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam'
2026-10-19T04:59:55,662   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.bam.bai'
2026-10-19T04:59:55,665   adding 'isovar/data/sid-reads/sources/8582d4b27f002464c48c781f.header.json'
2026-10-19T04:59:55,670   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam'
2026-10-19T04:59:55,672   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.bam.bai'
2026-10-19T04:59:55,685   adding 'isovar/data/sid-reads/sources/89110c2638e7281580818e44.header.json'
2026-10-19T04:59:55,711   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam'
2026-10-19T04:59:55,723   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.bam.bai'
2026-10-19T04:59:55,727   adding 'isovar/data/sid-reads/sources/8e41b034f2068ea46991a875.header.json'
2026-10-19T04:59:55,778   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam'
2026-10-19T04:59:55,787   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.bam.bai'
2026-10-19T04:59:55,805   adding 'isovar/data/sid-reads/sources/99255dc3e471d13bbcca8a15.header.json'
2026-10-19T04:59:55,810   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam'
2026-10-19T04:59:55,811   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.bam.bai'
2026-10-19T04:59:55,813   adding 'isovar/data/sid-reads/sources/9ab8f9a2760da0479fc17d1c.header.json'
2026-10-19T04:59:55,818   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam'
2026-10-19T04:59:55,820   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.bam.bai'
2026-10-19T04:59:55,822   adding 'isovar/data/sid-reads/sources/9cd9390098ea2e1324da19f7.header.json'
2026-10-19T04:59:55,825   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam'
2026-10-19T04:59:55,827   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.bam.bai'
2026-10-19T04:59:55,829   adding 'isovar/data/sid-reads/sources/ac0517c815ed0dfc64a454fe.header.json'
2026-10-19T04:59:55,831   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam'
2026-10-19T04:59:55,833   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.bam.bai'
2026-10-19T04:59:55,836   adding 'isovar/data/sid-reads/sources/aced29b0ffa69e9191f0966f.header.json'
2026-10-19T04:59:55,841   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam'
2026-10-19T04:59:55,843   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.bam.bai'
2026-10-19T04:59:55,856   adding 'isovar/data/sid-reads/sources/b036b10b91615f26c3d14c5f.header.json'
2026-10-19T04:59:55,863   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam'
2026-10-19T04:59:55,869   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.bam.bai'
2026-10-19T04:59:55,880   adding 'isovar/data/sid-reads/sources/b4d297a1c2aab34c9740b80f.header.json'
2026-10-19T04:59:55,890   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam'
2026-10-19T04:59:55,892   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.bam.bai'
2026-10-19T04:59:55,893   adding 'isovar/data/sid-reads/sources/b6e01dfa661dde2e6ef86329.header.json'
2026-10-19T04:59:55,923   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam'
2026-10-19T04:59:55,953   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.bam.bai'
2026-10-19T04:59:55,969   adding 'isovar/data/sid-reads/sources/c14786c8ce9298b65f3faa2d.header.json'
2026-10-19T04:59:55,973   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.bam'
2026-10-19T04:59:55,975   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.bam.bai'
2026-10-19T04:59:55,990   adding 'isovar/data/sid-reads/sources/c300dbf41837763346768069.header.json'
2026-10-19T04:59:55,998   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam'
2026-10-19T04:59:56,002   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.bam.bai'
2026-10-19T04:59:56,004   adding 'isovar/data/sid-reads/sources/c947cf60a75f3ec7dc948640.header.json'
2026-10-19T04:59:56,012   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam'
2026-10-19T04:59:56,015   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.bam.bai'
2026-10-19T04:59:56,031   adding 'isovar/data/sid-reads/sources/d170d3272edfa96c4dac6aca.header.json'
2026-10-19T04:59:56,125   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam'
2026-10-19T04:59:56,140   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.bam.bai'
2026-10-19T04:59:56,159   adding 'isovar/data/sid-reads/sources/e02f7ac11139cd0d01bbf3c1.header.json'
2026-10-19T04:59:56,176   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam'
2026-10-19T04:59:56,180   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.bam.bai'
2026-10-19T04:59:56,183   adding 'isovar/data/sid-reads/sources/e0f68e5116c09d6f3ca58e9c.header.json'
2026-10-19T04:59:56,293   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam'
2026-10-19T04:59:56,309   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.bam.bai'
2026-10-19T04:59:56,330   adding 'isovar/data/sid-reads/sources/e1690955f975a67d51672fc1.header.json'
2026-10-19T04:59:56,336   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam'
2026-10-19T04:59:56,338   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.bam.bai'
2026-10-19T04:59:56,340   adding 'isovar/data/sid-reads/sources/e209fb65a40eea6563ab96a2.header.json'
2026-10-19T04:59:56,346   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam'
2026-10-19T04:59:56,348   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.bam.bai'
2026-10-19T04:59:56,361   adding 'isovar/data/sid-reads/sources/e61e829a65e9d422f16191af.header.json'
2026-10-19T04:59:56,372   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam'
2026-10-19T04:59:56,379   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.bam.bai'
2026-10-19T04:59:56,391   adding 'isovar/data/sid-reads/sources/e63ce8627bef7d756b80d217.header.json'
2026-10-19T04:59:56,394   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam'
2026-10-19T04:59:56,396   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.bam.bai'
2026-10-19T04:59:56,398   adding 'isovar/data/sid-reads/sources/e71597b90129edd75af0d2a3.header.json'
2026-10-19T04:59:56,403   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam'
2026-10-19T04:59:56,406   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.bam.bai'
2026-10-19T04:59:56,418   adding 'isovar/data/sid-reads/sources/efdb0699ad69c187d2723c0c.header.json'
2026-10-19T04:59:56,548   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam'
2026-10-19T04:59:56,566   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.bam.bai'
2026-10-19T04:59:56,587   adding 'isovar/data/sid-reads/sources/f42ef62b8a857292a5300eb0.header.json'
2026-10-19T04:59:56,595   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam'
2026-10-19T04:59:56,600   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.bam.bai'
2026-10-19T04:59:56,603   adding 'isovar/data/sid-reads/sources/fcde14808fe5073ce8a2d918.header.json'
2026-10-19T04:59:56,608   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam'
2026-10-19T04:59:56,612   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.bam.bai'
2026-10-19T04:59:56,614   adding 'isovar/data/sid-reads/sources/ffc2634225ae966b32ebd383.header.json'
2026-10-19T04:59:56,618   adding 'isovar-1.57.2.dist-info/licenses/LICENSE'
2026-10-19T04:59:56,620   adding 'isovar-1.57.2.dist-info/METADATA'
2026-10-19T04:59:56,621   adding 'isovar-1.57.2.dist-info/WHEEL'
2026-10-19T04:59:56,622   adding 'isovar-1.57.2.dist-info/entry_points.txt'
2026-10-19T04:59:56,623   adding 'isovar-1.57.2.dist-info/top_level.txt'
2026-10-19T04:59:56,627   adding 'isovar-1.57.2.dist-info/RECORD'
2026-10-19T04:59:56,844   removing build/bdist.linux-armv7l/wheel
2026-10-19T04:59:57,007   Building wheel for isovar (pyproject.toml): finished with status 'done'
2026-10-19T04:59:57,269   Created wheel for isovar: filename=isovar-1.57.2-py3-none-any.whl size=11629116 sha256=f06404d8e09e9f925120cdd6174bd209010da64cab27c16028264fe3a7de0327
2026-10-19T04:59:57,271   Stored in directory: /tmp/pip-ephem-wheel-cache-i8l5nobb/wheels/fe/1a/73/25dcc4e3536c3e2677a05a862d40e26db18b573269e2620a70
2026-10-19T04:59:57,295 Successfully built isovar
2026-10-19T04:59:57,567 Removed build tracker: '/tmp/pip-build-tracker-ydu437ai'