2026-10-24T21:13:14,005 Created temporary directory: /tmp/pip-ephem-wheel-cache-cqfbhu8i 2026-10-24T21:13:14,007 Created temporary directory: /tmp/pip-build-tracker-1q8d0vb6 2026-10-24T21:13:14,008 Initialized build tracking at /tmp/pip-build-tracker-1q8d0vb6 2026-10-24T21:13:14,009 Created build tracker: /tmp/pip-build-tracker-1q8d0vb6 2026-10-24T21:13:14,009 Entered build tracker: /tmp/pip-build-tracker-1q8d0vb6 2026-10-24T21:13:14,010 Created temporary directory: /tmp/pip-wheel-ch9gxr8o 2026-10-24T21:13:14,013 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-24T21:13:14,016 Created temporary directory: /tmp/pip-ephem-wheel-cache-bbq5gbv0 2026-10-24T21:13:14,037 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-24T21:13:14,041 2 location(s) to search for versions of pyranges: 2026-10-24T21:13:14,041 * https://pypi.org/simple/pyranges/ 2026-10-24T21:13:14,041 * https://www.piwheels.org/simple/pyranges/ 2026-10-24T21:13:14,042 Fetching project page and analyzing links: https://pypi.org/simple/pyranges/ 2026-10-24T21:13:14,042 Getting page https://pypi.org/simple/pyranges/ 2026-10-24T21:13:14,044 Found index url https://pypi.org/simple 2026-10-24T21:13:14,511 Fetched page https://pypi.org/simple/pyranges/ as application/vnd.pypi.simple.v1+json 2026-10-24T21:13:14,535 Found link https://files.pythonhosted.org/packages/17/3c/951e147b350baaf8bc5790c2f26e376097c8aca958ecd962def4010335f8/pyranges-0.0.1.tar.gz (from 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https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,919 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.8-py3-none-any.whl#sha256=b329ad29fcee9ba26930f968c5015ee17b5de1310e05dc98bd1eaa6ff40568cf (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,920 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.7-py3-none-any.whl#sha256=558f60481f8ee5d9fcf19fea35d1055363c15efbe50301a6f8d1170a048f4a7b (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,920 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.6-py3-none-any.whl#sha256=251ecea10ab6ce6a45b3f52c794aede89e4121a4d6ee87973d5f83546247aa98 (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,921 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.4-py3-none-any.whl#sha256=18d0f2042af1da82540cbfd1d65382ba4b2b311d0b3b5195617ec444e8add036 (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,922 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.3-py3-none-any.whl#sha256=db33a73c7a071e2fbd0ff95a4b32ff6d1412069576b7f8952cc773c0a67d8aa0 (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,922 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.2-py3-none-any.whl#sha256=13ff8170eeb96f520d59fe40c76b03aefc380a69fd430237b2f1303b3f3c8d89 (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,922 Skipping link: No binaries permitted for pyranges: https://archive1.piwheels.org/simple/pyranges/pyranges-0.0.1-py3-none-any.whl#sha256=43b9f740545b22d3dccf04f6057d5713e33474cabea480df7fbddf28faa1cf7b (from https://www.piwheels.org/simple/pyranges/) 2026-10-24T21:13:14,923 Skipping link: not a file: https://www.piwheels.org/simple/pyranges/ 2026-10-24T21:13:14,923 Skipping link: not a file: https://pypi.org/simple/pyranges/ 2026-10-24T21:13:14,958 Given no hashes to check 1 links for project 'pyranges': discarding no candidates 2026-10-24T21:13:14,977 Collecting pyranges==0.1.6 2026-10-24T21:13:14,979 Created temporary directory: /tmp/pip-unpack-am44dr8o 2026-10-24T21:13:15,221 Downloading pyranges-0.1.6.tar.gz (1.5 MB) 2026-10-24T21:13:15,944 Added pyranges==0.1.6 from https://files.pythonhosted.org/packages/5e/4b/3224ae1fa3b5d930407bb66d38d81ade5fd2b0fccb5db360e2e7a0563596/pyranges-0.1.6.tar.gz to build tracker '/tmp/pip-build-tracker-1q8d0vb6' 2026-10-24T21:13:15,954 Created temporary directory: /tmp/pip-build-env-t12ejg_d 2026-10-24T21:13:15,958 Installing build dependencies: started 2026-10-24T21:13:15,959 Running command pip subprocess to install build dependencies 2026-10-24T21:13:17,112 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-10-24T21:13:17,574 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-24T21:13:17,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-24T21:13:19,428 Collecting setuptools>=61.0.0 2026-10-24T21:13:19,429 Obtaining dependency information for setuptools>=61.0.0 from https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata 2026-10-24T21:13:19,446 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata (6.6 kB) 2026-10-24T21:13:19,686 Collecting wheel 2026-10-24T21:13:19,687 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata 2026-10-24T21:13:19,700 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata (2.3 kB) 2026-10-24T21:13:21,889 Collecting cython 2026-10-24T21:13:21,890 Obtaining dependency information for cython from https://www.piwheels.org/simple/cython/cython-3.3.0-cp311-cp311-linux_armv7l.whl.metadata 2026-10-24T21:13:21,904 Using cached https://www.piwheels.org/simple/cython/cython-3.3.0-cp311-cp311-linux_armv7l.whl.metadata (28 kB) 2026-10-24T21:13:21,918 Discarding https://www.piwheels.org/simple/cython/cython-3.3.0-cp311-cp311-linux_armv7l.whl#sha256=a6216b5b0b00e864c25ee582a0d29ae651cef2fb300b10673146bc47b5c1b8b1 (from https://www.piwheels.org/simple/cython/) (requires-python:>=3.9): Requested cython from https://www.piwheels.org/simple/cython/cython-3.3.0-cp311-cp311-linux_armv7l.whl#sha256=a6216b5b0b00e864c25ee582a0d29ae651cef2fb300b10673146bc47b5c1b8b1 has inconsistent Name: expected 'cython', but metadata has 'Cython' 2026-10-24T21:13:21,985 Using cached cython-3.3.0-cp39-abi3-manylinux2014_armv7l.manylinux_2_17_armv7l.manylinux_2_31_armv7l.whl (3.0 MB) 2026-10-24T21:13:22,442 Collecting setuptools_scm[toml]>=6.2 2026-10-24T21:13:22,443 Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.3.4-py3-none-any.whl.metadata 2026-10-24T21:13:22,456 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.3.4-py3-none-any.whl.metadata (6.7 kB) 2026-10-24T21:13:22,465 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.3.4-py3-none-any.whl#sha256=4f1e03228b00ea3e4d086f76213b86b07ae918f991657213a190610a02dee076 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.8): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.3.4-py3-none-any.whl#sha256=4f1e03228b00ea3e4d086f76213b86b07ae918f991657213a190610a02dee076 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-10-24T21:13:22,488 Using cached setuptools_scm-10.3.4-py3-none-any.whl (33 kB) 2026-10-24T21:13:22,735 Collecting packaging>=24.0 2026-10-24T21:13:22,736 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata 2026-10-24T21:13:22,748 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata (3.6 kB) 2026-10-24T21:13:22,874 Collecting vcs-versioning<3,>=2.5.0.dev0 2026-10-24T21:13:22,875 Obtaining dependency information for vcs-versioning<3,>=2.5.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.6.0-py3-none-any.whl.metadata 2026-10-24T21:13:22,887 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.6.0-py3-none-any.whl.metadata (1.7 kB) 2026-10-24T21:13:23,163 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB) 2026-10-24T21:13:23,184 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-10-24T21:13:23,208 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.6.0-py3-none-any.whl (123 kB) 2026-10-24T21:13:23,299 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-24T21:13:23,365 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB) 2026-10-24T21:13:23,397 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-10-24T21:13:23,428 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-2.6.0-py3-none-any.whl (123 kB) 2026-10-24T21:13:23,511 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-24T21:13:26,305 Installing collected packages: setuptools, packaging, cython, wheel, vcs-versioning, setuptools_scm 2026-10-24T21:13:32,362 Creating /tmp/pip-build-env-t12ejg_d/overlay/local/bin 2026-10-24T21:13:32,365 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/cygdb to 755 2026-10-24T21:13:32,367 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/cython to 755 2026-10-24T21:13:32,369 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/cythonize to 755 2026-10-24T21:13:32,506 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/wheel to 755 2026-10-24T21:13:32,918 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/vcs-versioning to 755 2026-10-24T21:13:33,060 changing mode of /tmp/pip-build-env-t12ejg_d/overlay/local/bin/setuptools-scm to 755 2026-10-24T21:13:33,105 Successfully installed cython-3.3.0 packaging-26.3 setuptools-84.2.1 setuptools_scm-10.3.4 vcs-versioning-2.6.0 wheel-0.48.0 2026-10-24T21:13:33,519 Installing build dependencies: finished with status 'done' 2026-10-24T21:13:33,526 Getting requirements to build wheel: started 2026-10-24T21:13:33,527 Running command Getting requirements to build wheel 2026-10-24T21:13:34,275 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-10-24T21:13:34,275 !! 2026-10-24T21:13:34,276 ******************************************************************************** 2026-10-24T21:13:34,277 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-10-24T21:13:34,278 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-10-24T21:13:34,278 or your builds will no longer be supported. 2026-10-24T21:13:34,280 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:34,280 ******************************************************************************** 2026-10-24T21:13:34,281 !! 2026-10-24T21:13:34,282 corresp(dist, value, root_dir) 2026-10-24T21:13:34,544 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:34,545 !! 2026-10-24T21:13:34,546 ******************************************************************************** 2026-10-24T21:13:34,546 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:34,548 License :: OSI Approved :: MIT License 2026-10-24T21:13:34,549 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:34,549 ******************************************************************************** 2026-10-24T21:13:34,551 !! 2026-10-24T21:13:34,551 dist._finalize_license_expression() 2026-10-24T21:13:34,552 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:34,552 !! 2026-10-24T21:13:34,554 ******************************************************************************** 2026-10-24T21:13:34,554 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:34,555 License :: OSI Approved :: MIT License 2026-10-24T21:13:34,557 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:34,557 ******************************************************************************** 2026-10-24T21:13:34,558 !! 2026-10-24T21:13:34,559 self._finalize_license_expression() 2026-10-24T21:13:34,560 running egg_info 2026-10-24T21:13:34,568 writing pyranges.egg-info/PKG-INFO 2026-10-24T21:13:34,574 writing dependency_links to pyranges.egg-info/dependency_links.txt 2026-10-24T21:13:34,577 writing requirements to pyranges.egg-info/requires.txt 2026-10-24T21:13:34,578 writing top-level names to pyranges.egg-info/top_level.txt 2026-10-24T21:13:34,682 reading manifest file 'pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:34,693 adding license file 'LICENSE' 2026-10-24T21:13:34,701 writing manifest file 'pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:34,826 Getting requirements to build wheel: finished with status 'done' 2026-10-24T21:13:34,830 Created temporary directory: /tmp/pip-modern-metadata-yyismx8c 2026-10-24T21:13:34,833 Preparing metadata (pyproject.toml): started 2026-10-24T21:13:34,834 Running command Preparing metadata (pyproject.toml) 2026-10-24T21:13:35,545 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-10-24T21:13:35,545 !! 2026-10-24T21:13:35,546 ******************************************************************************** 2026-10-24T21:13:35,546 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-10-24T21:13:35,547 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-10-24T21:13:35,548 or your builds will no longer be supported. 2026-10-24T21:13:35,549 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:35,549 ******************************************************************************** 2026-10-24T21:13:35,550 !! 2026-10-24T21:13:35,551 corresp(dist, value, root_dir) 2026-10-24T21:13:35,797 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:35,798 !! 2026-10-24T21:13:35,799 ******************************************************************************** 2026-10-24T21:13:35,799 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:35,800 License :: OSI Approved :: MIT License 2026-10-24T21:13:35,802 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:35,802 ******************************************************************************** 2026-10-24T21:13:35,804 !! 2026-10-24T21:13:35,804 dist._finalize_license_expression() 2026-10-24T21:13:35,805 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:35,805 !! 2026-10-24T21:13:35,807 ******************************************************************************** 2026-10-24T21:13:35,807 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:35,808 License :: OSI Approved :: MIT License 2026-10-24T21:13:35,810 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:35,810 ******************************************************************************** 2026-10-24T21:13:35,812 !! 2026-10-24T21:13:35,812 self._finalize_license_expression() 2026-10-24T21:13:35,813 running dist_info 2026-10-24T21:13:35,827 creating /tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info 2026-10-24T21:13:35,828 writing /tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/PKG-INFO 2026-10-24T21:13:35,833 writing dependency_links to /tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/dependency_links.txt 2026-10-24T21:13:35,836 writing requirements to /tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/requires.txt 2026-10-24T21:13:35,838 writing top-level names to /tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/top_level.txt 2026-10-24T21:13:35,839 writing manifest file '/tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:35,935 reading manifest file '/tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:35,937 adding license file 'LICENSE' 2026-10-24T21:13:35,942 writing manifest file '/tmp/pip-modern-metadata-yyismx8c/pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:35,943 creating '/tmp/pip-modern-metadata-yyismx8c/pyranges-0.1.6.dist-info' 2026-10-24T21:13:36,093 Preparing metadata (pyproject.toml): finished with status 'done' 2026-10-24T21:13:36,098 Source in /tmp/pip-wheel-ch9gxr8o/pyranges_c101b5b31c104c1289bf6ea806c88ace has version 0.1.6, which satisfies requirement pyranges==0.1.6 from https://files.pythonhosted.org/packages/5e/4b/3224ae1fa3b5d930407bb66d38d81ade5fd2b0fccb5db360e2e7a0563596/pyranges-0.1.6.tar.gz 2026-10-24T21:13:36,098 Removed pyranges==0.1.6 from https://files.pythonhosted.org/packages/5e/4b/3224ae1fa3b5d930407bb66d38d81ade5fd2b0fccb5db360e2e7a0563596/pyranges-0.1.6.tar.gz from build tracker '/tmp/pip-build-tracker-1q8d0vb6' 2026-10-24T21:13:36,103 Created temporary directory: /tmp/pip-unpack-om90_ukc 2026-10-24T21:13:36,103 Building wheels for collected packages: pyranges 2026-10-24T21:13:36,108 Created temporary directory: /tmp/pip-wheel-qm1iq40j 2026-10-24T21:13:36,108 Destination directory: /tmp/pip-wheel-qm1iq40j 2026-10-24T21:13:36,110 Building wheel for pyranges (pyproject.toml): started 2026-10-24T21:13:36,111 Running command Building wheel for pyranges (pyproject.toml) 2026-10-24T21:13:36,838 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-10-24T21:13:36,839 !! 2026-10-24T21:13:36,840 ******************************************************************************** 2026-10-24T21:13:36,840 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-10-24T21:13:36,842 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-10-24T21:13:36,842 or your builds will no longer be supported. 2026-10-24T21:13:36,844 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:36,844 ******************************************************************************** 2026-10-24T21:13:36,845 !! 2026-10-24T21:13:36,846 corresp(dist, value, root_dir) 2026-10-24T21:13:37,086 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:37,086 !! 2026-10-24T21:13:37,087 ******************************************************************************** 2026-10-24T21:13:37,088 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:37,089 License :: OSI Approved :: MIT License 2026-10-24T21:13:37,090 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:37,091 ******************************************************************************** 2026-10-24T21:13:37,092 !! 2026-10-24T21:13:37,093 dist._finalize_license_expression() 2026-10-24T21:13:37,093 /tmp/pip-build-env-t12ejg_d/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-24T21:13:37,094 !! 2026-10-24T21:13:37,095 ******************************************************************************** 2026-10-24T21:13:37,096 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-24T21:13:37,097 License :: OSI Approved :: MIT License 2026-10-24T21:13:37,098 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-24T21:13:37,099 ******************************************************************************** 2026-10-24T21:13:37,100 !! 2026-10-24T21:13:37,101 self._finalize_license_expression() 2026-10-24T21:13:37,102 running bdist_wheel 2026-10-24T21:13:37,121 running build 2026-10-24T21:13:37,122 running build_py 2026-10-24T21:13:37,130 creating build/lib/docs 2026-10-24T21:13:37,132 copying docs/conf.py -> build/lib/docs 2026-10-24T21:13:37,136 creating build/lib/book 2026-10-24T21:13:37,137 copying book/exons.py -> build/lib/book 2026-10-24T21:13:37,141 copying book/make_book.py -> build/lib/book 2026-10-24T21:13:37,144 creating build/lib/pyranges 2026-10-24T21:13:37,145 copying pyranges/__init__.py -> build/lib/pyranges 2026-10-24T21:13:37,149 copying pyranges/subset.py -> build/lib/pyranges 2026-10-24T21:13:37,153 copying pyranges/multioverlap.py -> build/lib/pyranges 2026-10-24T21:13:37,159 copying pyranges/get_fasta.py -> build/lib/pyranges 2026-10-24T21:13:37,164 copying pyranges/pyranges_main.py -> build/lib/pyranges 2026-10-24T21:13:37,176 copying pyranges/statistics.py -> build/lib/pyranges 2026-10-24T21:13:37,182 copying pyranges/data.py -> build/lib/pyranges 2026-10-24T21:13:37,189 copying pyranges/tostring2.py -> build/lib/pyranges 2026-10-24T21:13:37,196 copying pyranges/genomicfeatures.py -> build/lib/pyranges 2026-10-24T21:13:37,199 copying pyranges/out.py -> build/lib/pyranges 2026-10-24T21:13:37,201 copying pyranges/readers.py -> build/lib/pyranges 2026-10-24T21:13:37,204 copying pyranges/multithreaded.py -> build/lib/pyranges 2026-10-24T21:13:37,206 copying pyranges/helpers.py -> build/lib/pyranges 2026-10-24T21:13:37,208 copying pyranges/stats.py -> build/lib/pyranges 2026-10-24T21:13:37,210 creating build/lib/tests 2026-10-24T21:13:37,211 copying tests/helpers.py -> build/lib/tests 2026-10-24T21:13:37,215 creating build/lib/pyranges/methods 2026-10-24T21:13:37,216 copying pyranges/methods/__init__.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,218 copying pyranges/methods/merge.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,220 copying pyranges/methods/intersection.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,222 copying pyranges/methods/join.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,224 copying pyranges/methods/split.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,226 copying pyranges/methods/nearest.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,228 copying pyranges/methods/drop_duplicates.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,230 copying pyranges/methods/drop.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,232 copying pyranges/methods/itergrs.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,233 copying pyranges/methods/coverage.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,235 copying pyranges/methods/sort.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,237 copying pyranges/methods/max_disjoint.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,238 copying pyranges/methods/k_nearest.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,241 copying pyranges/methods/statistics.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,242 copying pyranges/methods/getitem.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,245 copying pyranges/methods/windows.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,249 copying pyranges/methods/cluster.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,256 copying pyranges/methods/to_rle.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,262 copying pyranges/methods/spliced_subsequence.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,268 copying pyranges/methods/new_position.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,275 copying pyranges/methods/subsequence.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,284 copying pyranges/methods/insert.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,292 copying pyranges/methods/attr.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,299 copying pyranges/methods/summary.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,302 copying pyranges/methods/init.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,304 copying pyranges/methods/boundaries.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,307 copying pyranges/methods/call.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,309 copying pyranges/methods/concat.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,311 copying pyranges/methods/subtraction.py -> build/lib/pyranges/methods 2026-10-24T21:13:37,313 creating build/lib/tests/unit 2026-10-24T21:13:37,314 copying tests/unit/test_statistics.py -> build/lib/tests/unit 2026-10-24T21:13:37,316 copying tests/unit/__init__.py -> build/lib/tests/unit 2026-10-24T21:13:37,317 copying tests/unit/conftest.py -> build/lib/tests/unit 2026-10-24T21:13:37,319 copying tests/unit/test_getset_attr.py -> build/lib/tests/unit 2026-10-24T21:13:37,321 copying tests/unit/k_nearest.py -> build/lib/tests/unit 2026-10-24T21:13:37,323 copying tests/unit/test_guessers.py -> build/lib/tests/unit 2026-10-24T21:13:37,325 copying tests/unit/statistics.py -> build/lib/tests/unit 2026-10-24T21:13:37,326 copying tests/unit/test_io.py -> build/lib/tests/unit 2026-10-24T21:13:37,328 copying tests/unit/test_concat.py -> build/lib/tests/unit 2026-10-24T21:13:37,330 copying tests/unit/test_change_chromosome_custom.py -> build/lib/tests/unit 2026-10-24T21:13:37,332 copying tests/unit/test_pickle.py -> build/lib/tests/unit 2026-10-24T21:13:37,335 copying tests/unit/test_count_overlaps.py -> build/lib/tests/unit 2026-10-24T21:13:37,338 copying tests/unit/test_stranded.py -> build/lib/tests/unit 2026-10-24T21:13:37,341 copying tests/unit/test_genomicfeatures.py -> build/lib/tests/unit 2026-10-24T21:13:37,344 creating build/lib/tests/tutorial_doctest 2026-10-24T21:13:37,346 copying tests/tutorial_doctest/__init__.py -> build/lib/tests/tutorial_doctest 2026-10-24T21:13:37,348 copying tests/tutorial_doctest/test_how_to_pages.py -> build/lib/tests/tutorial_doctest 2026-10-24T21:13:37,350 copying tests/tutorial_doctest/test_tutorial.py -> build/lib/tests/tutorial_doctest 2026-10-24T21:13:37,353 creating build/lib/tests/property_based 2026-10-24T21:13:37,355 copying tests/property_based/__init__.py -> build/lib/tests/property_based 2026-10-24T21:13:37,357 copying tests/property_based/test_do_not_error.py -> build/lib/tests/property_based 2026-10-24T21:13:37,359 copying tests/property_based/hypothesis_helper.py -> build/lib/tests/property_based 2026-10-24T21:13:37,361 copying tests/property_based/test_binary.py -> build/lib/tests/property_based 2026-10-24T21:13:37,364 copying tests/property_based/test_unary.py -> build/lib/tests/property_based 2026-10-24T21:13:37,367 creating build/lib/tests/unit/data 2026-10-24T21:13:37,369 copying tests/unit/data/test_data.py -> build/lib/tests/unit/data 2026-10-24T21:13:37,372 creating build/lib/tests/unit/join 2026-10-24T21:13:37,373 copying tests/unit/join/test_join.py -> build/lib/tests/unit/join 2026-10-24T21:13:37,376 creating build/lib/tests/unit/unit 2026-10-24T21:13:37,377 copying tests/unit/unit/__init__.py -> build/lib/tests/unit/unit 2026-10-24T21:13:37,379 creating build/lib/tests/unit/slack 2026-10-24T21:13:37,380 copying tests/unit/slack/test_slack.py -> build/lib/tests/unit/slack 2026-10-24T21:13:37,382 creating build/lib/tests/unit/unstrand 2026-10-24T21:13:37,383 copying tests/unit/unstrand/test_unstrand.py -> build/lib/tests/unit/unstrand 2026-10-24T21:13:37,386 creating build/lib/tests/unit/new_position 2026-10-24T21:13:37,387 copying tests/unit/new_position/test_new_position.py -> build/lib/tests/unit/new_position 2026-10-24T21:13:37,390 creating build/lib/tests/unit/out 2026-10-24T21:13:37,391 copying tests/unit/out/test_out.py -> build/lib/tests/unit/out 2026-10-24T21:13:37,394 creating build/lib/tests/unit/df_dict_mismatch 2026-10-24T21:13:37,395 copying tests/unit/df_dict_mismatch/test_mismatch.py -> build/lib/tests/unit/df_dict_mismatch 2026-10-24T21:13:37,398 creating build/lib/tests/unit/windows 2026-10-24T21:13:37,400 copying tests/unit/windows/test_windows.py -> build/lib/tests/unit/windows 2026-10-24T21:13:37,402 creating build/lib/tests/unit/getitem 2026-10-24T21:13:37,404 copying tests/unit/getitem/test_getitem.py -> build/lib/tests/unit/getitem 2026-10-24T21:13:37,405 running egg_info 2026-10-24T21:13:37,421 writing pyranges.egg-info/PKG-INFO 2026-10-24T21:13:37,427 writing dependency_links to pyranges.egg-info/dependency_links.txt 2026-10-24T21:13:37,429 writing requirements to pyranges.egg-info/requires.txt 2026-10-24T21:13:37,430 writing top-level names to pyranges.egg-info/top_level.txt 2026-10-24T21:13:37,518 reading manifest file 'pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:37,528 adding license file 'LICENSE' 2026-10-24T21:13:37,537 writing manifest file 'pyranges.egg-info/SOURCES.txt' 2026-10-24T21:13:37,553 copying docs/Makefile -> build/lib/docs 2026-10-24T21:13:37,555 copying docs/_iframe.html -> build/lib/docs 2026-10-24T21:13:37,558 copying docs/_index.rst.html -> build/lib/docs 2026-10-24T21:13:37,560 copying docs/developer_guide.rst -> build/lib/docs 2026-10-24T21:13:37,562 copying docs/how_to_book_old_version.rst -> build/lib/docs 2026-10-24T21:13:37,567 copying docs/how_to_pages.rst -> build/lib/docs 2026-10-24T21:13:37,571 copying docs/index.rst -> build/lib/docs 2026-10-24T21:13:37,573 copying docs/installation.rst -> build/lib/docs 2026-10-24T21:13:37,576 copying docs/make.bat -> build/lib/docs 2026-10-24T21:13:37,579 copying docs/requirements.txt -> build/lib/docs 2026-10-24T21:13:37,581 copying docs/tutorial.rst -> build/lib/docs 2026-10-24T21:13:37,585 copying book/_bookdown.yml -> build/lib/book 2026-10-24T21:13:37,587 copying book/build_book.yml -> build/lib/book 2026-10-24T21:13:37,589 copying book/colocalization.Rmd -> build/lib/book 2026-10-24T21:13:37,591 copying book/compile.R -> build/lib/book 2026-10-24T21:13:37,593 copying book/compile2.R -> build/lib/book 2026-10-24T21:13:37,596 copying book/concat.Rmd -> build/lib/book 2026-10-24T21:13:37,598 copying book/count_overlaps.Rmd -> build/lib/book 2026-10-24T21:13:37,600 copying book/coverage.Rmd -> build/lib/book 2026-10-24T21:13:37,602 copying book/creating.Rmd -> build/lib/book 2026-10-24T21:13:37,605 copying book/custom_methods.Rmd -> build/lib/book 2026-10-24T21:13:37,607 copying book/databases.Rmd -> build/lib/book 2026-10-24T21:13:37,609 copying book/fisher_exact.Rmd -> build/lib/book 2026-10-24T21:13:37,611 copying book/genomicfeatures.Rmd -> build/lib/book 2026-10-24T21:13:37,613 copying book/index.Rmd -> build/lib/book 2026-10-24T21:13:37,616 copying book/insert.Rmd -> build/lib/book 2026-10-24T21:13:37,618 copying book/intersection.Rmd -> build/lib/book 2026-10-24T21:13:37,620 copying book/iterate.Rmd -> build/lib/book 2026-10-24T21:13:37,622 copying book/join.Rmd -> build/lib/book 2026-10-24T21:13:37,624 copying book/knearest.Rmd -> build/lib/book 2026-10-24T21:13:37,627 copying book/manipulation.Rmd -> build/lib/book 2026-10-24T21:13:37,629 copying book/mcc.Rmd -> build/lib/book 2026-10-24T21:13:37,631 copying book/multithreading.Rmd -> build/lib/book 2026-10-24T21:13:37,633 copying book/nearest.Rmd -> build/lib/book 2026-10-24T21:13:37,635 copying book/piping.Rmd -> build/lib/book 2026-10-24T21:13:37,637 copying book/printing.Rmd -> build/lib/book 2026-10-24T21:13:37,639 copying book/pyranges.css -> build/lib/book 2026-10-24T21:13:37,641 copying book/reldist.Rmd -> build/lib/book 2026-10-24T21:13:37,644 copying book/rowbased_statistics.Rmd -> build/lib/book 2026-10-24T21:13:37,646 copying book/runlength_dict.Rmd -> build/lib/book 2026-10-24T21:13:37,648 copying book/runlengths.Rmd -> build/lib/book 2026-10-24T21:13:37,650 copying book/simes.Rmd -> build/lib/book 2026-10-24T21:13:37,652 copying book/single_range_methods.Rmd -> build/lib/book 2026-10-24T21:13:37,654 copying book/sort.Rmd -> build/lib/book 2026-10-24T21:13:37,656 copying book/subset.Rmd -> build/lib/book 2026-10-24T21:13:37,658 copying book/subsetting_pyrles.Rmd -> build/lib/book 2026-10-24T21:13:37,660 copying book/subsetting_rles.Rmd -> build/lib/book 2026-10-24T21:13:37,663 copying book/subtract.Rmd -> build/lib/book 2026-10-24T21:13:37,665 copying book/summary.Rmd -> build/lib/book 2026-10-24T21:13:37,667 copying book/tutorial.Rmd -> build/lib/book 2026-10-24T21:13:37,670 copying book/writing.Rmd -> build/lib/book 2026-10-24T21:13:37,672 copying pyranges/docs -> build/lib/pyranges 2026-10-24T21:13:37,673 creating build/lib/graphs 2026-10-24T21:13:37,674 copying graphs/hypothesis-tested-brightgreen.svg -> build/lib/graphs 2026-10-24T21:13:37,676 copying graphs/main_paper_annotation_binary.png -> build/lib/graphs 2026-10-24T21:13:37,686 copying graphs/memory.png -> build/lib/graphs 2026-10-24T21:13:37,694 copying graphs/time.png -> build/lib/graphs 2026-10-24T21:13:37,702 copying tests/.fuse_hidden0000017200000002 -> build/lib/tests 2026-10-24T21:13:37,705 copying tests/hi -> build/lib/tests 2026-10-24T21:13:37,707 creating build/lib/pyranges/example_data 2026-10-24T21:13:37,708 copying pyranges/example_data/aorta.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,710 copying pyranges/example_data/aorta2.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,712 copying pyranges/example_data/bw.bw -> build/lib/pyranges/example_data 2026-10-24T21:13:37,715 copying pyranges/example_data/chipseq.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,723 copying pyranges/example_data/chipseq_background.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,730 copying pyranges/example_data/chromsizes.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,732 copying pyranges/example_data/control.bam -> build/lib/pyranges/example_data 2026-10-24T21:13:37,736 copying pyranges/example_data/control.bam.bai -> build/lib/pyranges/example_data 2026-10-24T21:13:37,773 copying pyranges/example_data/cpg.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,776 copying pyranges/example_data/ensembl.gtf -> build/lib/pyranges/example_data 2026-10-24T21:13:37,780 copying pyranges/example_data/ensembl_human.gtf.gz -> build/lib/pyranges/example_data 2026-10-24T21:13:37,784 copying pyranges/example_data/exons.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,788 copying pyranges/example_data/f1.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,791 copying pyranges/example_data/f2.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,794 copying pyranges/example_data/gencode_human.gtf.gz -> build/lib/pyranges/example_data 2026-10-24T21:13:37,798 copying pyranges/example_data/lamina.bed -> build/lib/pyranges/example_data 2026-10-24T21:13:37,803 copying pyranges/example_data/ucsc_human.bed.gz -> build/lib/pyranges/example_data 2026-10-24T21:13:37,808 copying tests/unit/chip_10.bed -> build/lib/tests/unit 2026-10-24T21:13:37,811 copying tests/unit/f1.bed -> build/lib/tests/unit 2026-10-24T21:13:37,814 copying tests/unit/f2.bed -> build/lib/tests/unit 2026-10-24T21:13:37,817 copying tests/unit/hi -> build/lib/tests/unit 2026-10-24T21:13:37,821 creating build/lib/tests/unit/test_data 2026-10-24T21:13:37,822 copying tests/unit/test_data/ensembl.gtf -> build/lib/tests/unit/test_data 2026-10-24T21:13:37,826 copying tests/unit/test_data/gencode.gff3 -> build/lib/tests/unit/test_data 2026-10-24T21:13:37,831 copying tests/unit/test_data/test_sorted.bam -> build/lib/tests/unit/test_data 2026-10-24T21:13:37,836 copying tests/unit/test_data/test_sorted.bam.bai -> build/lib/tests/unit/test_data 2026-10-24T21:13:37,891 installing to build/bdist.linux-armv7l/wheel 2026-10-24T21:13:37,892 running install 2026-10-24T21:13:37,915 running install_lib 2026-10-24T21:13:37,923 creating build/bdist.linux-armv7l/wheel 2026-10-24T21:13:37,925 creating build/bdist.linux-armv7l/wheel/docs 2026-10-24T21:13:37,926 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,928 copying build/lib/docs/_index.rst.html -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,930 copying build/lib/docs/how_to_book_old_version.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,933 copying build/lib/docs/tutorial.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,936 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,938 copying build/lib/docs/installation.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,940 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,942 copying build/lib/docs/how_to_pages.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,945 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,947 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,948 copying build/lib/docs/_iframe.html -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,950 copying build/lib/docs/developer_guide.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-10-24T21:13:37,953 creating build/bdist.linux-armv7l/wheel/book 2026-10-24T21:13:37,954 copying build/lib/book/rowbased_statistics.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,956 copying build/lib/book/build_book.yml -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,958 copying build/lib/book/coverage.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,960 copying build/lib/book/subset.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,961 copying build/lib/book/custom_methods.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,963 copying build/lib/book/runlengths.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,965 copying build/lib/book/iterate.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,966 copying build/lib/book/creating.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,968 copying build/lib/book/compile2.R -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,970 copying build/lib/book/tutorial.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,973 copying build/lib/book/mcc.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,974 copying build/lib/book/colocalization.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,976 copying build/lib/book/nearest.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,978 copying build/lib/book/printing.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,979 copying build/lib/book/piping.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,981 copying build/lib/book/sort.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,983 copying build/lib/book/reldist.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,985 copying build/lib/book/subtract.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,986 copying build/lib/book/exons.py -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,988 copying build/lib/book/pyranges.css -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,990 copying build/lib/book/runlength_dict.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,992 copying build/lib/book/intersection.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,993 copying build/lib/book/knearest.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,995 copying build/lib/book/databases.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,997 copying build/lib/book/insert.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:37,999 copying build/lib/book/make_book.py -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,000 copying build/lib/book/genomicfeatures.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,002 copying build/lib/book/join.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,004 copying build/lib/book/subsetting_pyrles.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,006 copying build/lib/book/multithreading.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,008 copying build/lib/book/manipulation.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,009 copying build/lib/book/writing.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,012 copying build/lib/book/compile.R -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,013 copying build/lib/book/single_range_methods.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,015 copying build/lib/book/count_overlaps.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,017 copying build/lib/book/subsetting_rles.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,018 copying build/lib/book/index.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,020 copying build/lib/book/_bookdown.yml -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,022 copying build/lib/book/concat.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,023 copying build/lib/book/fisher_exact.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,025 copying build/lib/book/simes.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,026 copying build/lib/book/summary.Rmd -> build/bdist.linux-armv7l/wheel/./book 2026-10-24T21:13:38,029 creating build/bdist.linux-armv7l/wheel/pyranges 2026-10-24T21:13:38,030 copying build/lib/pyranges/__init__.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,032 copying build/lib/pyranges/docs -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,034 creating build/bdist.linux-armv7l/wheel/pyranges/example_data 2026-10-24T21:13:38,035 copying build/lib/pyranges/example_data/chipseq_background.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,042 copying build/lib/pyranges/example_data/control.bam.bai -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,078 copying build/lib/pyranges/example_data/control.bam -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,082 copying build/lib/pyranges/example_data/ensembl_human.gtf.gz -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,085 copying build/lib/pyranges/example_data/exons.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,090 copying build/lib/pyranges/example_data/chromsizes.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,092 copying build/lib/pyranges/example_data/aorta2.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,094 copying build/lib/pyranges/example_data/f1.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,096 copying build/lib/pyranges/example_data/ucsc_human.bed.gz -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,100 copying build/lib/pyranges/example_data/chipseq.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,109 copying build/lib/pyranges/example_data/f2.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,111 copying build/lib/pyranges/example_data/cpg.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,114 copying build/lib/pyranges/example_data/aorta.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,116 copying build/lib/pyranges/example_data/bw.bw -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,119 copying build/lib/pyranges/example_data/gencode_human.gtf.gz -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,123 copying build/lib/pyranges/example_data/lamina.bed -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,127 copying build/lib/pyranges/example_data/ensembl.gtf -> build/bdist.linux-armv7l/wheel/./pyranges/example_data 2026-10-24T21:13:38,131 creating build/bdist.linux-armv7l/wheel/pyranges/methods 2026-10-24T21:13:38,133 copying build/lib/pyranges/methods/__init__.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,135 copying build/lib/pyranges/methods/merge.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,138 copying build/lib/pyranges/methods/intersection.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,141 copying build/lib/pyranges/methods/join.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,144 copying build/lib/pyranges/methods/split.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,147 copying build/lib/pyranges/methods/nearest.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,150 copying build/lib/pyranges/methods/drop_duplicates.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,152 copying build/lib/pyranges/methods/drop.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,155 copying build/lib/pyranges/methods/itergrs.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,157 copying build/lib/pyranges/methods/coverage.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,160 copying build/lib/pyranges/methods/sort.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,163 copying build/lib/pyranges/methods/max_disjoint.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,168 copying build/lib/pyranges/methods/k_nearest.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,176 copying build/lib/pyranges/methods/statistics.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,182 copying build/lib/pyranges/methods/getitem.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,186 copying build/lib/pyranges/methods/windows.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,192 copying build/lib/pyranges/methods/cluster.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,199 copying build/lib/pyranges/methods/to_rle.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,206 copying build/lib/pyranges/methods/spliced_subsequence.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,221 copying build/lib/pyranges/methods/new_position.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,236 copying build/lib/pyranges/methods/subsequence.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,244 copying build/lib/pyranges/methods/insert.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,247 copying build/lib/pyranges/methods/attr.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,250 copying build/lib/pyranges/methods/summary.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,252 copying build/lib/pyranges/methods/init.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,255 copying build/lib/pyranges/methods/boundaries.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,257 copying build/lib/pyranges/methods/call.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,259 copying build/lib/pyranges/methods/concat.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,262 copying build/lib/pyranges/methods/subtraction.py -> build/bdist.linux-armv7l/wheel/./pyranges/methods 2026-10-24T21:13:38,264 copying build/lib/pyranges/subset.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,267 copying build/lib/pyranges/multioverlap.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,269 copying build/lib/pyranges/get_fasta.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,272 copying build/lib/pyranges/pyranges_main.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,282 copying build/lib/pyranges/statistics.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,285 copying build/lib/pyranges/data.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,289 copying build/lib/pyranges/tostring2.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,292 copying build/lib/pyranges/genomicfeatures.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,296 copying build/lib/pyranges/out.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,299 copying build/lib/pyranges/readers.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,304 copying build/lib/pyranges/multithreaded.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,309 copying build/lib/pyranges/helpers.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,314 copying build/lib/pyranges/stats.py -> build/bdist.linux-armv7l/wheel/./pyranges 2026-10-24T21:13:38,320 creating build/bdist.linux-armv7l/wheel/graphs 2026-10-24T21:13:38,322 copying build/lib/graphs/hypothesis-tested-brightgreen.svg -> build/bdist.linux-armv7l/wheel/./graphs 2026-10-24T21:13:38,325 copying build/lib/graphs/memory.png -> build/bdist.linux-armv7l/wheel/./graphs 2026-10-24T21:13:38,334 copying build/lib/graphs/time.png -> build/bdist.linux-armv7l/wheel/./graphs 2026-10-24T21:13:38,343 copying build/lib/graphs/main_paper_annotation_binary.png -> build/bdist.linux-armv7l/wheel/./graphs 2026-10-24T21:13:38,354 creating build/bdist.linux-armv7l/wheel/tests 2026-10-24T21:13:38,356 creating build/bdist.linux-armv7l/wheel/tests/unit 2026-10-24T21:13:38,358 copying build/lib/tests/unit/test_statistics.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,360 creating build/bdist.linux-armv7l/wheel/tests/unit/data 2026-10-24T21:13:38,361 copying build/lib/tests/unit/data/test_data.py -> build/bdist.linux-armv7l/wheel/./tests/unit/data 2026-10-24T21:13:38,364 creating build/bdist.linux-armv7l/wheel/tests/unit/join 2026-10-24T21:13:38,365 copying build/lib/tests/unit/join/test_join.py -> build/bdist.linux-armv7l/wheel/./tests/unit/join 2026-10-24T21:13:38,368 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,370 copying build/lib/tests/unit/conftest.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,373 creating build/bdist.linux-armv7l/wheel/tests/unit/unit 2026-10-24T21:13:38,375 copying build/lib/tests/unit/unit/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/unit/unit 2026-10-24T21:13:38,378 creating build/bdist.linux-armv7l/wheel/tests/unit/test_data 2026-10-24T21:13:38,380 copying build/lib/tests/unit/test_data/gencode.gff3 -> build/bdist.linux-armv7l/wheel/./tests/unit/test_data 2026-10-24T21:13:38,383 copying build/lib/tests/unit/test_data/test_sorted.bam -> build/bdist.linux-armv7l/wheel/./tests/unit/test_data 2026-10-24T21:13:38,399 copying build/lib/tests/unit/test_data/test_sorted.bam.bai -> build/bdist.linux-armv7l/wheel/./tests/unit/test_data 2026-10-24T21:13:38,447 copying build/lib/tests/unit/test_data/ensembl.gtf -> build/bdist.linux-armv7l/wheel/./tests/unit/test_data 2026-10-24T21:13:38,451 creating build/bdist.linux-armv7l/wheel/tests/unit/slack 2026-10-24T21:13:38,454 copying build/lib/tests/unit/slack/test_slack.py -> build/bdist.linux-armv7l/wheel/./tests/unit/slack 2026-10-24T21:13:38,482 copying build/lib/tests/unit/chip_10.bed -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,484 copying build/lib/tests/unit/test_getset_attr.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,487 copying build/lib/tests/unit/k_nearest.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,490 copying build/lib/tests/unit/test_guessers.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,493 creating build/bdist.linux-armv7l/wheel/tests/unit/unstrand 2026-10-24T21:13:38,518 copying build/lib/tests/unit/unstrand/test_unstrand.py -> build/bdist.linux-armv7l/wheel/./tests/unit/unstrand 2026-10-24T21:13:38,521 copying build/lib/tests/unit/f1.bed -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,524 creating build/bdist.linux-armv7l/wheel/tests/unit/new_position 2026-10-24T21:13:38,525 copying build/lib/tests/unit/new_position/test_new_position.py -> build/bdist.linux-armv7l/wheel/./tests/unit/new_position 2026-10-24T21:13:38,528 copying build/lib/tests/unit/statistics.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,531 copying build/lib/tests/unit/test_io.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,533 copying build/lib/tests/unit/hi -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,547 creating build/bdist.linux-armv7l/wheel/tests/unit/out 2026-10-24T21:13:38,549 copying build/lib/tests/unit/out/test_out.py -> build/bdist.linux-armv7l/wheel/./tests/unit/out 2026-10-24T21:13:38,551 copying build/lib/tests/unit/test_concat.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,557 creating build/bdist.linux-armv7l/wheel/tests/unit/df_dict_mismatch 2026-10-24T21:13:38,558 copying build/lib/tests/unit/df_dict_mismatch/test_mismatch.py -> build/bdist.linux-armv7l/wheel/./tests/unit/df_dict_mismatch 2026-10-24T21:13:38,560 copying build/lib/tests/unit/f2.bed -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,562 copying build/lib/tests/unit/test_change_chromosome_custom.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,565 copying build/lib/tests/unit/test_pickle.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,567 creating build/bdist.linux-armv7l/wheel/tests/unit/windows 2026-10-24T21:13:38,569 copying build/lib/tests/unit/windows/test_windows.py -> build/bdist.linux-armv7l/wheel/./tests/unit/windows 2026-10-24T21:13:38,571 copying build/lib/tests/unit/test_count_overlaps.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,574 creating build/bdist.linux-armv7l/wheel/tests/unit/getitem 2026-10-24T21:13:38,575 copying build/lib/tests/unit/getitem/test_getitem.py -> build/bdist.linux-armv7l/wheel/./tests/unit/getitem 2026-10-24T21:13:38,577 copying build/lib/tests/unit/test_stranded.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,579 copying build/lib/tests/unit/test_genomicfeatures.py -> build/bdist.linux-armv7l/wheel/./tests/unit 2026-10-24T21:13:38,582 copying build/lib/tests/.fuse_hidden0000017200000002 -> build/bdist.linux-armv7l/wheel/./tests 2026-10-24T21:13:38,585 copying build/lib/tests/hi -> build/bdist.linux-armv7l/wheel/./tests 2026-10-24T21:13:38,587 creating build/bdist.linux-armv7l/wheel/tests/tutorial_doctest 2026-10-24T21:13:38,589 copying build/lib/tests/tutorial_doctest/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/tutorial_doctest 2026-10-24T21:13:38,590 copying build/lib/tests/tutorial_doctest/test_how_to_pages.py -> build/bdist.linux-armv7l/wheel/./tests/tutorial_doctest 2026-10-24T21:13:38,592 copying build/lib/tests/tutorial_doctest/test_tutorial.py -> build/bdist.linux-armv7l/wheel/./tests/tutorial_doctest 2026-10-24T21:13:38,595 creating build/bdist.linux-armv7l/wheel/tests/property_based 2026-10-24T21:13:38,596 copying build/lib/tests/property_based/__init__.py -> build/bdist.linux-armv7l/wheel/./tests/property_based 2026-10-24T21:13:38,598 copying build/lib/tests/property_based/test_do_not_error.py -> build/bdist.linux-armv7l/wheel/./tests/property_based 2026-10-24T21:13:38,601 copying build/lib/tests/property_based/hypothesis_helper.py -> build/bdist.linux-armv7l/wheel/./tests/property_based 2026-10-24T21:13:38,603 copying build/lib/tests/property_based/test_binary.py -> build/bdist.linux-armv7l/wheel/./tests/property_based 2026-10-24T21:13:38,606 copying build/lib/tests/property_based/test_unary.py -> build/bdist.linux-armv7l/wheel/./tests/property_based 2026-10-24T21:13:38,609 copying build/lib/tests/helpers.py -> build/bdist.linux-armv7l/wheel/./tests 2026-10-24T21:13:38,611 running install_egg_info 2026-10-24T21:13:38,618 Copying pyranges.egg-info to build/bdist.linux-armv7l/wheel/./pyranges-0.1.6-py3.11.egg-info 2026-10-24T21:13:38,628 running install_scripts 2026-10-24T21:13:38,637 creating build/bdist.linux-armv7l/wheel/pyranges-0.1.6.dist-info/WHEEL 2026-10-24T21:13:38,639 creating '/tmp/pip-wheel-qm1iq40j/.tmp-t4rucvar/pyranges-0.1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-10-24T21:13:38,642 adding 'book/_bookdown.yml' 2026-10-24T21:13:38,643 adding 'book/build_book.yml' 2026-10-24T21:13:38,645 adding 'book/colocalization.Rmd' 2026-10-24T21:13:38,646 adding 'book/compile.R' 2026-10-24T21:13:38,647 adding 'book/compile2.R' 2026-10-24T21:13:38,648 adding 'book/concat.Rmd' 2026-10-24T21:13:38,649 adding 'book/count_overlaps.Rmd' 2026-10-24T21:13:38,651 adding 'book/coverage.Rmd' 2026-10-24T21:13:38,652 adding 'book/creating.Rmd' 2026-10-24T21:13:38,653 adding 'book/custom_methods.Rmd' 2026-10-24T21:13:38,654 adding 'book/databases.Rmd' 2026-10-24T21:13:38,656 adding 'book/exons.py' 2026-10-24T21:13:38,657 adding 'book/fisher_exact.Rmd' 2026-10-24T21:13:38,658 adding 'book/genomicfeatures.Rmd' 2026-10-24T21:13:38,659 adding 'book/index.Rmd' 2026-10-24T21:13:38,660 adding 'book/insert.Rmd' 2026-10-24T21:13:38,662 adding 'book/intersection.Rmd' 2026-10-24T21:13:38,663 adding 'book/iterate.Rmd' 2026-10-24T21:13:38,664 adding 'book/join.Rmd' 2026-10-24T21:13:38,666 adding 'book/knearest.Rmd' 2026-10-24T21:13:38,667 adding 'book/make_book.py' 2026-10-24T21:13:38,668 adding 'book/manipulation.Rmd' 2026-10-24T21:13:38,669 adding 'book/mcc.Rmd' 2026-10-24T21:13:38,671 adding 'book/multithreading.Rmd' 2026-10-24T21:13:38,672 adding 'book/nearest.Rmd' 2026-10-24T21:13:38,673 adding 'book/piping.Rmd' 2026-10-24T21:13:38,674 adding 'book/printing.Rmd' 2026-10-24T21:13:38,675 adding 'book/pyranges.css' 2026-10-24T21:13:38,677 adding 'book/reldist.Rmd' 2026-10-24T21:13:38,678 adding 'book/rowbased_statistics.Rmd' 2026-10-24T21:13:38,679 adding 'book/runlength_dict.Rmd' 2026-10-24T21:13:38,680 adding 'book/runlengths.Rmd' 2026-10-24T21:13:38,682 adding 'book/simes.Rmd' 2026-10-24T21:13:38,683 adding 'book/single_range_methods.Rmd' 2026-10-24T21:13:38,684 adding 'book/sort.Rmd' 2026-10-24T21:13:38,685 adding 'book/subset.Rmd' 2026-10-24T21:13:38,687 adding 'book/subsetting_pyrles.Rmd' 2026-10-24T21:13:38,688 adding 'book/subsetting_rles.Rmd' 2026-10-24T21:13:38,689 adding 'book/subtract.Rmd' 2026-10-24T21:13:38,690 adding 'book/summary.Rmd' 2026-10-24T21:13:38,694 adding 'book/tutorial.Rmd' 2026-10-24T21:13:38,695 adding 'book/writing.Rmd' 2026-10-24T21:13:38,697 adding 'docs/Makefile' 2026-10-24T21:13:38,698 adding 'docs/_iframe.html' 2026-10-24T21:13:38,699 adding 'docs/_index.rst.html' 2026-10-24T21:13:38,701 adding 'docs/conf.py' 2026-10-24T21:13:38,703 adding 'docs/developer_guide.rst' 2026-10-24T21:13:38,709 adding 'docs/how_to_book_old_version.rst' 2026-10-24T21:13:38,715 adding 'docs/how_to_pages.rst' 2026-10-24T21:13:38,717 adding 'docs/index.rst' 2026-10-24T21:13:38,719 adding 'docs/installation.rst' 2026-10-24T21:13:38,720 adding 'docs/make.bat' 2026-10-24T21:13:38,721 adding 'docs/requirements.txt' 2026-10-24T21:13:38,727 adding 'docs/tutorial.rst' 2026-10-24T21:13:38,729 adding 'graphs/hypothesis-tested-brightgreen.svg' 2026-10-24T21:13:38,757 adding 'graphs/main_paper_annotation_binary.png' 2026-10-24T21:13:38,784 adding 'graphs/memory.png' 2026-10-24T21:13:38,807 adding 'graphs/time.png' 2026-10-24T21:13:38,811 adding 'pyranges/__init__.py' 2026-10-24T21:13:38,814 adding 'pyranges/data.py' 2026-10-24T21:13:38,815 adding 'pyranges/docs' 2026-10-24T21:13:38,818 adding 'pyranges/genomicfeatures.py' 2026-10-24T21:13:38,820 adding 'pyranges/get_fasta.py' 2026-10-24T21:13:38,821 adding 'pyranges/helpers.py' 2026-10-24T21:13:38,823 adding 'pyranges/multioverlap.py' 2026-10-24T21:13:38,825 adding 'pyranges/multithreaded.py' 2026-10-24T21:13:38,826 adding 'pyranges/out.py' 2026-10-24T21:13:38,845 adding 'pyranges/pyranges_main.py' 2026-10-24T21:13:38,850 adding 'pyranges/readers.py' 2026-10-24T21:13:38,853 adding 'pyranges/statistics.py' 2026-10-24T21:13:38,855 adding 'pyranges/stats.py' 2026-10-24T21:13:38,856 adding 'pyranges/subset.py' 2026-10-24T21:13:38,858 adding 'pyranges/tostring2.py' 2026-10-24T21:13:38,860 adding 'pyranges/example_data/aorta.bed' 2026-10-24T21:13:38,861 adding 'pyranges/example_data/aorta2.bed' 2026-10-24T21:13:38,862 adding 'pyranges/example_data/bw.bw' 2026-10-24T21:13:38,915 adding 'pyranges/example_data/chipseq.bed' 2026-10-24T21:13:38,970 adding 'pyranges/example_data/chipseq_background.bed' 2026-10-24T21:13:38,973 adding 'pyranges/example_data/chromsizes.bed' 2026-10-24T21:13:38,983 adding 'pyranges/example_data/control.bam' 2026-10-24T21:13:39,053 adding 'pyranges/example_data/control.bam.bai' 2026-10-24T21:13:39,068 adding 'pyranges/example_data/cpg.bed' 2026-10-24T21:13:39,071 adding 'pyranges/example_data/ensembl.gtf' 2026-10-24T21:13:39,075 adding 'pyranges/example_data/ensembl_human.gtf.gz' 2026-10-24T21:13:39,084 adding 'pyranges/example_data/exons.bed' 2026-10-24T21:13:39,086 adding 'pyranges/example_data/f1.bed' 2026-10-24T21:13:39,087 adding 'pyranges/example_data/f2.bed' 2026-10-24T21:13:39,096 adding 'pyranges/example_data/gencode_human.gtf.gz' 2026-10-24T21:13:39,109 adding 'pyranges/example_data/lamina.bed' 2026-10-24T21:13:39,117 adding 'pyranges/example_data/ucsc_human.bed.gz' 2026-10-24T21:13:39,119 adding 'pyranges/methods/__init__.py' 2026-10-24T21:13:39,121 adding 'pyranges/methods/attr.py' 2026-10-24T21:13:39,122 adding 'pyranges/methods/boundaries.py' 2026-10-24T21:13:39,123 adding 'pyranges/methods/call.py' 2026-10-24T21:13:39,124 adding 'pyranges/methods/cluster.py' 2026-10-24T21:13:39,126 adding 'pyranges/methods/concat.py' 2026-10-24T21:13:39,128 adding 'pyranges/methods/coverage.py' 2026-10-24T21:13:39,129 adding 'pyranges/methods/drop.py' 2026-10-24T21:13:39,131 adding 'pyranges/methods/drop_duplicates.py' 2026-10-24T21:13:39,133 adding 'pyranges/methods/getitem.py' 2026-10-24T21:13:39,135 adding 'pyranges/methods/init.py' 2026-10-24T21:13:39,137 adding 'pyranges/methods/insert.py' 2026-10-24T21:13:39,140 adding 'pyranges/methods/intersection.py' 2026-10-24T21:13:39,142 adding 'pyranges/methods/itergrs.py' 2026-10-24T21:13:39,144 adding 'pyranges/methods/join.py' 2026-10-24T21:13:39,146 adding 'pyranges/methods/k_nearest.py' 2026-10-24T21:13:39,148 adding 'pyranges/methods/max_disjoint.py' 2026-10-24T21:13:39,150 adding 'pyranges/methods/merge.py' 2026-10-24T21:13:39,153 adding 'pyranges/methods/nearest.py' 2026-10-24T21:13:39,155 adding 'pyranges/methods/new_position.py' 2026-10-24T21:13:39,157 adding 'pyranges/methods/sort.py' 2026-10-24T21:13:39,159 adding 'pyranges/methods/spliced_subsequence.py' 2026-10-24T21:13:39,161 adding 'pyranges/methods/split.py' 2026-10-24T21:13:39,163 adding 'pyranges/methods/statistics.py' 2026-10-24T21:13:39,164 adding 'pyranges/methods/subsequence.py' 2026-10-24T21:13:39,166 adding 'pyranges/methods/subtraction.py' 2026-10-24T21:13:39,168 adding 'pyranges/methods/summary.py' 2026-10-24T21:13:39,169 adding 'pyranges/methods/to_rle.py' 2026-10-24T21:13:39,171 adding 'pyranges/methods/windows.py' 2026-10-24T21:13:39,176 adding 'pyranges-0.1.6.dist-info/licenses/LICENSE' 2026-10-24T21:13:39,180 adding 'tests/.fuse_hidden0000017200000002' 2026-10-24T21:13:39,182 adding 'tests/helpers.py' 2026-10-24T21:13:39,183 adding 'tests/hi' 2026-10-24T21:13:39,186 adding 'tests/property_based/__init__.py' 2026-10-24T21:13:39,188 adding 'tests/property_based/hypothesis_helper.py' 2026-10-24T21:13:39,190 adding 'tests/property_based/test_binary.py' 2026-10-24T21:13:39,192 adding 'tests/property_based/test_do_not_error.py' 2026-10-24T21:13:39,195 adding 'tests/property_based/test_unary.py' 2026-10-24T21:13:39,198 adding 'tests/tutorial_doctest/__init__.py' 2026-10-24T21:13:39,200 adding 'tests/tutorial_doctest/test_how_to_pages.py' 2026-10-24T21:13:39,202 adding 'tests/tutorial_doctest/test_tutorial.py' 2026-10-24T21:13:39,206 adding 'tests/unit/__init__.py' 2026-10-24T21:13:39,207 adding 'tests/unit/chip_10.bed' 2026-10-24T21:13:39,209 adding 'tests/unit/conftest.py' 2026-10-24T21:13:39,211 adding 'tests/unit/f1.bed' 2026-10-24T21:13:39,212 adding 'tests/unit/f2.bed' 2026-10-24T21:13:39,214 adding 'tests/unit/hi' 2026-10-24T21:13:39,215 adding 'tests/unit/k_nearest.py' 2026-10-24T21:13:39,217 adding 'tests/unit/statistics.py' 2026-10-24T21:13:39,218 adding 'tests/unit/test_change_chromosome_custom.py' 2026-10-24T21:13:39,219 adding 'tests/unit/test_concat.py' 2026-10-24T21:13:39,220 adding 'tests/unit/test_count_overlaps.py' 2026-10-24T21:13:39,222 adding 'tests/unit/test_genomicfeatures.py' 2026-10-24T21:13:39,223 adding 'tests/unit/test_getset_attr.py' 2026-10-24T21:13:39,224 adding 'tests/unit/test_guessers.py' 2026-10-24T21:13:39,225 adding 'tests/unit/test_io.py' 2026-10-24T21:13:39,226 adding 'tests/unit/test_pickle.py' 2026-10-24T21:13:39,228 adding 'tests/unit/test_statistics.py' 2026-10-24T21:13:39,229 adding 'tests/unit/test_stranded.py' 2026-10-24T21:13:39,231 adding 'tests/unit/data/test_data.py' 2026-10-24T21:13:39,232 adding 'tests/unit/df_dict_mismatch/test_mismatch.py' 2026-10-24T21:13:39,234 adding 'tests/unit/getitem/test_getitem.py' 2026-10-24T21:13:39,236 adding 'tests/unit/join/test_join.py' 2026-10-24T21:13:39,237 adding 'tests/unit/new_position/test_new_position.py' 2026-10-24T21:13:39,239 adding 'tests/unit/out/test_out.py' 2026-10-24T21:13:39,240 adding 'tests/unit/slack/test_slack.py' 2026-10-24T21:13:39,243 adding 'tests/unit/test_data/ensembl.gtf' 2026-10-24T21:13:39,246 adding 'tests/unit/test_data/gencode.gff3' 2026-10-24T21:13:39,255 adding 'tests/unit/test_data/test_sorted.bam' 2026-10-24T21:13:39,327 adding 'tests/unit/test_data/test_sorted.bam.bai' 2026-10-24T21:13:39,341 adding 'tests/unit/unit/__init__.py' 2026-10-24T21:13:39,343 adding 'tests/unit/unstrand/test_unstrand.py' 2026-10-24T21:13:39,345 adding 'tests/unit/windows/test_windows.py' 2026-10-24T21:13:39,346 adding 'pyranges-0.1.6.dist-info/METADATA' 2026-10-24T21:13:39,347 adding 'pyranges-0.1.6.dist-info/WHEEL' 2026-10-24T21:13:39,348 adding 'pyranges-0.1.6.dist-info/top_level.txt' 2026-10-24T21:13:39,350 adding 'pyranges-0.1.6.dist-info/RECORD' 2026-10-24T21:13:39,386 removing build/bdist.linux-armv7l/wheel 2026-10-24T21:13:39,575 Building wheel for pyranges (pyproject.toml): finished with status 'done' 2026-10-24T21:13:39,617 Created wheel for pyranges: filename=pyranges-0.1.6-py3-none-any.whl size=1513932 sha256=62cfe42705f06f33313104cf8935010388eeea66da336f5dd6abc1f03d8841ee 2026-10-24T21:13:39,618 Stored in directory: /tmp/pip-ephem-wheel-cache-bbq5gbv0/wheels/50/dc/23/ce682212e9feb445a770c7ebcd909315e88cc11f976cea31e2 2026-10-24T21:13:39,634 Successfully built pyranges 2026-10-24T21:13:39,675 Removed build tracker: '/tmp/pip-build-tracker-1q8d0vb6'