2026-10-27T03:05:16,401 Created temporary directory: /tmp/pip-ephem-wheel-cache-qsrfs8vy 2026-10-27T03:05:16,403 Created temporary directory: /tmp/pip-build-tracker-ltfegknm 2026-10-27T03:05:16,403 Initialized build tracking at /tmp/pip-build-tracker-ltfegknm 2026-10-27T03:05:16,404 Created build tracker: /tmp/pip-build-tracker-ltfegknm 2026-10-27T03:05:16,404 Entered build tracker: /tmp/pip-build-tracker-ltfegknm 2026-10-27T03:05:16,405 Created temporary directory: /tmp/pip-wheel-3tgrt0wy 2026-10-27T03:05:16,408 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-27T03:05:16,410 Created temporary directory: /tmp/pip-ephem-wheel-cache-yfyy0qe9 2026-10-27T03:05:16,432 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-27T03:05:16,435 2 location(s) to search for versions of weirdo: 2026-10-27T03:05:16,435 * https://pypi.org/simple/weirdo/ 2026-10-27T03:05:16,435 * https://www.piwheels.org/simple/weirdo/ 2026-10-27T03:05:16,436 Fetching project page and analyzing links: https://pypi.org/simple/weirdo/ 2026-10-27T03:05:16,437 Getting page https://pypi.org/simple/weirdo/ 2026-10-27T03:05:16,438 Found index url https://pypi.org/simple 2026-10-27T03:05:16,588 Fetched page https://pypi.org/simple/weirdo/ as application/vnd.pypi.simple.v1+json 2026-10-27T03:05:16,592 Found link https://files.pythonhosted.org/packages/e1/70/f02435b2ff70c1734076ae5cba91c0098383d4ac61ca5310c2dd879bc8eb/weirdo-1.0.0.macosx-11.1-arm64.tar.gz (from https://pypi.org/simple/weirdo/), version: 1.0.0.macosx-11.1-arm64 2026-10-27T03:05:16,593 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/db/5b/1ed1b05a9069776f9e75033f935a8302c670899de7f48571cc9e36ae0b52/weirdo-2.1.0-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,594 Found link https://files.pythonhosted.org/packages/99/38/b95e25db2b4ca7f2b6cef3132536bf1ac4fa359e334df4b0be4b55769290/weirdo-2.1.0.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.0 2026-10-27T03:05:16,595 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/e8/3e/d81b6b6e2439118d2f375ec31991688836ae0743dd492b09b74f27aad6cb/weirdo-2.1.1-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,596 Found link https://files.pythonhosted.org/packages/6d/e7/9ebe5cd8201edbdfe0ade6d30534f05a7071290e025ee428709d459690ba/weirdo-2.1.1.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.1 2026-10-27T03:05:16,596 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/44/d1/34f6e84eb573c83fac5591e7cb337c03d8db018ff6cbf3e021cc7fc5e237/weirdo-2.1.2-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,598 Found link https://files.pythonhosted.org/packages/2c/a9/74f3892b028cfed8b4e7c76c6cdae64c7533c60bd509037338f1dfde244c/weirdo-2.1.2.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.2 2026-10-27T03:05:16,598 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/d4/be/002b2c7ee2e53f6f78ab6aca37359252d941634ffbb560e44c1e728b5fa7/weirdo-2.1.3-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,599 Found link https://files.pythonhosted.org/packages/dd/f2/52cb382568fe4a7124a7c3a3e8e706c582d3dbd0a1a70e3ed0b64de98b89/weirdo-2.1.3.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.3 2026-10-27T03:05:16,600 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/3a/a9/50de4a395ed0d48e5073b040d3bdaf4f28d159cc2f6908fc5a299a232f4d/weirdo-2.1.4-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,601 Found link https://files.pythonhosted.org/packages/b1/1c/54edd5f1b5cc6d5c9a1dd4aaef9e6283f5e0ccd985f02285e0e85f66614c/weirdo-2.1.4.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.9), version: 2.1.4 2026-10-27T03:05:16,602 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/f1/1b/2020a837d3b7139683e7224d61eb825ddecb290d2a83d1fe4735c1173015/weirdo-2.2.0-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10) 2026-10-27T03:05:16,603 Found link https://files.pythonhosted.org/packages/30/31/e961b6dba09982281aa0f90ec21b40dc843b89266a5c7bfe518e924fd95b/weirdo-2.2.0.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10), version: 2.2.0 2026-10-27T03:05:16,603 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/fb/c0/c54f6a5bcb95c127351e649dcf619f2967c2c22a9553f4b1e61267743582/weirdo-2.3.0-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10) 2026-10-27T03:05:16,604 Found link https://files.pythonhosted.org/packages/18/db/f9ebe239c8069e85d2c57cd0807d6a825d9caf15fdf010bd8a8d512cba07/weirdo-2.3.0.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10), version: 2.3.0 2026-10-27T03:05:16,605 Skipping link: No binaries permitted for weirdo: https://files.pythonhosted.org/packages/18/fe/481ce8d279e2c3ac9bd6081c83f7b1ea73b6f0fdfc7acd53b981fe0fb8db/weirdo-2.4.0-py3-none-any.whl (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10) 2026-10-27T03:05:16,606 Found link https://files.pythonhosted.org/packages/92/85/544d58fda6fe7ca718993a706421a0bf65eebf3ceb4fad2597f3c8acc32c/weirdo-2.4.0.tar.gz (from https://pypi.org/simple/weirdo/) (requires-python:>=3.10), version: 2.4.0 2026-10-27T03:05:16,606 Fetching project page and analyzing links: https://www.piwheels.org/simple/weirdo/ 2026-10-27T03:05:16,607 Getting page https://www.piwheels.org/simple/weirdo/ 2026-10-27T03:05:16,609 Found index url https://www.piwheels.org/simple 2026-10-27T03:05:16,792 Fetched page https://www.piwheels.org/simple/weirdo/ as text/html 2026-10-27T03:05:16,796 Skipping link: No binaries permitted for weirdo: https://www.piwheels.org/simple/weirdo/weirdo-2.3.0-py3-none-any.whl#sha256=15a1e830d7088888e47fd11392e02e63aeb2ec245d1f1750cf82511935bd8706 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.10) 2026-10-27T03:05:16,796 Skipping link: No binaries permitted for weirdo: https://www.piwheels.org/simple/weirdo/weirdo-2.2.0-py3-none-any.whl#sha256=5e839bb533363158ffaf7d8b52ec8d1cc27484326b3000d21663baf215735994 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.10) 2026-10-27T03:05:16,797 Skipping link: No binaries permitted for weirdo: https://www.piwheels.org/simple/weirdo/weirdo-2.1.4-py3-none-any.whl#sha256=a9a3bd49df0a0f1fd85d6433edbe1732111a85876a7b11ac95d6867b992621e2 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,798 Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.3-py3-none-any.whl#sha256=ff84ac8d49141b246047de68cd6dd13db19bb1a622f0692b834a5bf0c4bbc482 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,798 Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.2-py3-none-any.whl#sha256=b21550f393d664cc311a1302ae149d7d5e99a964ee3d74e9d5ff36572012ac83 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,799 Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.1-py3-none-any.whl#sha256=cfc6759704a74137305b6abb3571ba04d22b5cacc6034e7d3bd85896ffb6426e (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,800 Skipping link: No binaries permitted for weirdo: https://archive1.piwheels.org/simple/weirdo/weirdo-2.1.0-py3-none-any.whl#sha256=d2d02b6afd6ff93c178404f24f360b291375a352dbf7a5f132f6b4f640fe8911 (from https://www.piwheels.org/simple/weirdo/) (requires-python:>=3.9) 2026-10-27T03:05:16,800 Skipping link: not a file: https://www.piwheels.org/simple/weirdo/ 2026-10-27T03:05:16,801 Skipping link: not a file: https://pypi.org/simple/weirdo/ 2026-10-27T03:05:16,820 Given no hashes to check 1 links for project 'weirdo': discarding no candidates 2026-10-27T03:05:16,838 Collecting weirdo==2.4.0 2026-10-27T03:05:16,840 Created temporary directory: /tmp/pip-unpack-jay0pq_c 2026-10-27T03:05:16,990 Downloading weirdo-2.4.0.tar.gz (1.7 MB) 2026-10-27T03:05:17,443 Added weirdo==2.4.0 from https://files.pythonhosted.org/packages/92/85/544d58fda6fe7ca718993a706421a0bf65eebf3ceb4fad2597f3c8acc32c/weirdo-2.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-ltfegknm' 2026-10-27T03:05:17,448 Created temporary directory: /tmp/pip-build-env-7edxzkb0 2026-10-27T03:05:17,452 Installing build dependencies: started 2026-10-27T03:05:17,453 Running command pip subprocess to install build dependencies 2026-10-27T03:05:18,849 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-10-27T03:05:19,301 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-27T03:05:19,323 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-27T03:05:21,189 Collecting setuptools>=64 2026-10-27T03:05:21,191 Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata 2026-10-27T03:05:21,207 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata (6.6 kB) 2026-10-27T03:05:21,463 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-27T03:05:21,551 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-27T03:05:24,329 Installing collected packages: setuptools 2026-10-27T03:05:26,917 Successfully installed setuptools-84.2.1 2026-10-27T03:05:27,221 Installing build dependencies: finished with status 'done' 2026-10-27T03:05:27,279 Getting requirements to build wheel: started 2026-10-27T03:05:27,281 Running command Getting requirements to build wheel 2026-10-27T03:05:28,032 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:28,033 !! 2026-10-27T03:05:28,034 ******************************************************************************** 2026-10-27T03:05:28,034 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:28,036 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:28,037 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:28,037 ******************************************************************************** 2026-10-27T03:05:28,038 !! 2026-10-27T03:05:28,039 dist._finalize_license_expression() 2026-10-27T03:05:28,041 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:28,042 !! 2026-10-27T03:05:28,044 ******************************************************************************** 2026-10-27T03:05:28,044 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:28,046 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:28,047 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:28,047 ******************************************************************************** 2026-10-27T03:05:28,048 !! 2026-10-27T03:05:28,048 self._finalize_license_expression() 2026-10-27T03:05:28,053 running egg_info 2026-10-27T03:05:28,058 writing weirdo.egg-info/PKG-INFO 2026-10-27T03:05:28,065 writing dependency_links to weirdo.egg-info/dependency_links.txt 2026-10-27T03:05:28,066 writing entry points to weirdo.egg-info/entry_points.txt 2026-10-27T03:05:28,070 writing requirements to weirdo.egg-info/requires.txt 2026-10-27T03:05:28,071 writing top-level names to weirdo.egg-info/top_level.txt 2026-10-27T03:05:28,104 reading manifest file 'weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:28,111 reading manifest template 'MANIFEST.in' 2026-10-27T03:05:28,117 adding license file 'LICENSE' 2026-10-27T03:05:28,124 writing manifest file 'weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:28,223 Getting requirements to build wheel: finished with status 'done' 2026-10-27T03:05:28,226 Created temporary directory: /tmp/pip-modern-metadata-_z1r7it5 2026-10-27T03:05:28,229 Preparing metadata (pyproject.toml): started 2026-10-27T03:05:28,230 Running command Preparing metadata (pyproject.toml) 2026-10-27T03:05:28,868 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:28,868 !! 2026-10-27T03:05:28,869 ******************************************************************************** 2026-10-27T03:05:28,870 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:28,871 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:28,872 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:28,873 ******************************************************************************** 2026-10-27T03:05:28,874 !! 2026-10-27T03:05:28,875 dist._finalize_license_expression() 2026-10-27T03:05:28,875 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:28,876 !! 2026-10-27T03:05:28,877 ******************************************************************************** 2026-10-27T03:05:28,878 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:28,879 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:28,880 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:28,881 ******************************************************************************** 2026-10-27T03:05:28,882 !! 2026-10-27T03:05:28,882 self._finalize_license_expression() 2026-10-27T03:05:28,883 running dist_info 2026-10-27T03:05:28,890 creating /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info 2026-10-27T03:05:28,891 writing /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/PKG-INFO 2026-10-27T03:05:28,898 writing dependency_links to /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/dependency_links.txt 2026-10-27T03:05:28,899 writing entry points to /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/entry_points.txt 2026-10-27T03:05:28,903 writing requirements to /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/requires.txt 2026-10-27T03:05:28,904 writing top-level names to /tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/top_level.txt 2026-10-27T03:05:28,906 writing manifest file '/tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:28,934 reading manifest file '/tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:28,936 reading manifest template 'MANIFEST.in' 2026-10-27T03:05:28,942 adding license file 'LICENSE' 2026-10-27T03:05:28,948 writing manifest file '/tmp/pip-modern-metadata-_z1r7it5/weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:28,949 creating '/tmp/pip-modern-metadata-_z1r7it5/weirdo-2.4.0.dist-info' 2026-10-27T03:05:29,075 Preparing metadata (pyproject.toml): finished with status 'done' 2026-10-27T03:05:29,080 Source in /tmp/pip-wheel-3tgrt0wy/weirdo_9c0bbcf8b7f14b588cecb91e4baf7c38 has version 2.4.0, which satisfies requirement weirdo==2.4.0 from https://files.pythonhosted.org/packages/92/85/544d58fda6fe7ca718993a706421a0bf65eebf3ceb4fad2597f3c8acc32c/weirdo-2.4.0.tar.gz 2026-10-27T03:05:29,081 Removed weirdo==2.4.0 from https://files.pythonhosted.org/packages/92/85/544d58fda6fe7ca718993a706421a0bf65eebf3ceb4fad2597f3c8acc32c/weirdo-2.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-ltfegknm' 2026-10-27T03:05:29,088 Created temporary directory: /tmp/pip-unpack-gpg9ndn4 2026-10-27T03:05:29,089 Building wheels for collected packages: weirdo 2026-10-27T03:05:29,093 Created temporary directory: /tmp/pip-wheel-_aj350qk 2026-10-27T03:05:29,093 Destination directory: /tmp/pip-wheel-_aj350qk 2026-10-27T03:05:29,095 Building wheel for weirdo (pyproject.toml): started 2026-10-27T03:05:29,097 Running command Building wheel for weirdo (pyproject.toml) 2026-10-27T03:05:29,721 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:29,721 !! 2026-10-27T03:05:29,722 ******************************************************************************** 2026-10-27T03:05:29,723 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:29,724 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:29,725 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:29,726 ******************************************************************************** 2026-10-27T03:05:29,727 !! 2026-10-27T03:05:29,728 dist._finalize_license_expression() 2026-10-27T03:05:29,728 /tmp/pip-build-env-7edxzkb0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-10-27T03:05:29,729 !! 2026-10-27T03:05:29,730 ******************************************************************************** 2026-10-27T03:05:29,731 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-10-27T03:05:29,732 License :: OSI Approved :: Apache Software License 2026-10-27T03:05:29,733 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-10-27T03:05:29,734 ******************************************************************************** 2026-10-27T03:05:29,735 !! 2026-10-27T03:05:29,735 self._finalize_license_expression() 2026-10-27T03:05:29,736 running bdist_wheel 2026-10-27T03:05:29,747 running build 2026-10-27T03:05:29,747 running build_py 2026-10-27T03:05:29,753 creating build/lib/scripts 2026-10-27T03:05:29,756 copying scripts/category_data.py -> build/lib/scripts 2026-10-27T03:05:29,758 copying scripts/train_peptide_content_models.py -> build/lib/scripts 2026-10-27T03:05:29,761 copying scripts/tcell_stratified_eval.py -> build/lib/scripts 2026-10-27T03:05:29,764 copying scripts/viral_host_peptide_content_data.py -> build/lib/scripts 2026-10-27T03:05:29,767 copying scripts/check_released_model.py -> build/lib/scripts 2026-10-27T03:05:29,769 copying scripts/evaluate_improve_foreignness.py -> build/lib/scripts 2026-10-27T03:05:29,771 copying scripts/train_modal_long_run.py -> build/lib/scripts 2026-10-27T03:05:29,774 copying scripts/analyze_taxonomy_buckets.py -> build/lib/scripts 2026-10-27T03:05:29,776 copying scripts/train_category_predictor.py -> build/lib/scripts 2026-10-27T03:05:29,779 copying scripts/category_eval.py -> build/lib/scripts 2026-10-27T03:05:29,781 copying scripts/peptide_content_data.py -> build/lib/scripts 2026-10-27T03:05:29,783 copying scripts/category_headroom.py -> build/lib/scripts 2026-10-27T03:05:29,786 copying scripts/evaluate_peptide_content_immunogenicity.py -> build/lib/scripts 2026-10-27T03:05:29,788 copying scripts/reference_proteome_data.py -> build/lib/scripts 2026-10-27T03:05:29,791 copying scripts/evaluate_tcell_transfer.py -> build/lib/scripts 2026-10-27T03:05:29,793 copying scripts/audit_foreignness_definitions.py -> build/lib/scripts 2026-10-27T03:05:29,795 copying scripts/train_peptide_content_modal.py -> build/lib/scripts 2026-10-27T03:05:29,799 creating build/lib/weirdo 2026-10-27T03:05:29,800 copying weirdo/pmbec.py -> build/lib/weirdo 2026-10-27T03:05:29,802 copying weirdo/peptide_vectorizer.py -> build/lib/weirdo 2026-10-27T03:05:29,803 copying weirdo/peptide_content.py -> build/lib/weirdo 2026-10-27T03:05:29,805 copying weirdo/released.py -> build/lib/weirdo 2026-10-27T03:05:29,808 copying weirdo/reference_proteomes.py -> build/lib/weirdo 2026-10-27T03:05:29,810 copying weirdo/common.py -> build/lib/weirdo 2026-10-27T03:05:29,812 copying weirdo/distances.py -> build/lib/weirdo 2026-10-27T03:05:29,814 copying weirdo/amino_acid_alphabet.py -> build/lib/weirdo 2026-10-27T03:05:29,816 copying weirdo/kmer_table.py -> build/lib/weirdo 2026-10-27T03:05:29,818 copying weirdo/amino_acid.py -> build/lib/weirdo 2026-10-27T03:05:29,820 copying weirdo/__init__.py -> build/lib/weirdo 2026-10-27T03:05:29,822 copying weirdo/reduced_alphabet.py -> build/lib/weirdo 2026-10-27T03:05:29,824 copying weirdo/cli.py -> build/lib/weirdo 2026-10-27T03:05:29,826 copying weirdo/chou_fasman.py -> build/lib/weirdo 2026-10-27T03:05:29,828 copying weirdo/static_data.py -> build/lib/weirdo 2026-10-27T03:05:29,830 copying weirdo/amino_acid_properties.py -> build/lib/weirdo 2026-10-27T03:05:29,832 copying weirdo/api.py -> build/lib/weirdo 2026-10-27T03:05:29,835 copying weirdo/uniprot.py -> build/lib/weirdo 2026-10-27T03:05:29,838 copying weirdo/data_manager.py -> build/lib/weirdo 2026-10-27T03:05:29,840 copying weirdo/model_manager.py -> build/lib/weirdo 2026-10-27T03:05:29,843 copying weirdo/residue_contact_energies.py -> build/lib/weirdo 2026-10-27T03:05:29,844 copying weirdo/blosum.py -> build/lib/weirdo 2026-10-27T03:05:29,846 copying weirdo/score_policies.py -> build/lib/weirdo 2026-10-27T03:05:29,849 creating build/lib/weirdo/scorers 2026-10-27T03:05:29,850 copying weirdo/scorers/trainable.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,853 copying weirdo/scorers/__init__.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,855 copying weirdo/scorers/peptide_features.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,858 copying weirdo/scorers/base.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,860 copying weirdo/scorers/swissprot.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,862 copying weirdo/scorers/registry.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,864 copying weirdo/scorers/mlp.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,868 copying weirdo/scorers/config.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,870 copying weirdo/scorers/similarity.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,872 copying weirdo/scorers/reference.py -> build/lib/weirdo/scorers 2026-10-27T03:05:29,875 creating build/lib/weirdo/matrices 2026-10-27T03:05:29,876 copying weirdo/matrices/__init__.py -> build/lib/weirdo/matrices 2026-10-27T03:05:29,879 running egg_info 2026-10-27T03:05:29,889 writing weirdo.egg-info/PKG-INFO 2026-10-27T03:05:29,895 writing dependency_links to weirdo.egg-info/dependency_links.txt 2026-10-27T03:05:29,896 writing entry points to weirdo.egg-info/entry_points.txt 2026-10-27T03:05:29,899 writing requirements to weirdo.egg-info/requires.txt 2026-10-27T03:05:29,900 writing top-level names to weirdo.egg-info/top_level.txt 2026-10-27T03:05:29,920 reading manifest file 'weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:29,927 reading manifest template 'MANIFEST.in' 2026-10-27T03:05:29,933 adding license file 'LICENSE' 2026-10-27T03:05:29,939 writing manifest file 'weirdo.egg-info/SOURCES.txt' 2026-10-27T03:05:29,949 copying weirdo/matrices/BLOSUM62 -> build/lib/weirdo/matrices 2026-10-27T03:05:29,951 copying weirdo/matrices/amino_acid_properties.txt -> build/lib/weirdo/matrices 2026-10-27T03:05:29,954 copying weirdo/matrices/BLOSUM30 -> build/lib/weirdo/matrices 2026-10-27T03:05:29,957 copying weirdo/matrices/BLOSUM50 -> build/lib/weirdo/matrices 2026-10-27T03:05:29,959 copying weirdo/matrices/helix_vs_coil.txt -> build/lib/weirdo/matrices 2026-10-27T03:05:29,961 copying weirdo/matrices/helix_vs_strand.txt -> build/lib/weirdo/matrices 2026-10-27T03:05:29,963 copying weirdo/matrices/strand_vs_coil.txt -> build/lib/weirdo/matrices 2026-10-27T03:05:29,965 copying weirdo/matrices/pmbec.mat -> build/lib/weirdo/matrices 2026-10-27T03:05:29,968 creating build/lib/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:29,969 copying weirdo/pretrained/peptide-content-v1/metadata.json -> build/lib/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:29,971 copying weirdo/pretrained/peptide-content-v1/config.json -> build/lib/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:29,973 copying weirdo/pretrained/peptide-content-v1/evaluation.json -> build/lib/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:29,976 copying weirdo/pretrained/peptide-content-v1/model.pt -> build/lib/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:29,989 creating build/lib/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:29,990 copying weirdo/pretrained/swissprot-categories/metadata.json -> build/lib/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:29,993 copying weirdo/pretrained/swissprot-categories/config.json -> build/lib/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:29,995 copying weirdo/pretrained/swissprot-categories/model.pt -> build/lib/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,011 copying weirdo/pretrained/swissprot-categories/manifest.json -> build/lib/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,013 creating build/lib/weirdo/reference_proteome_manifests 2026-10-27T03:05:30,014 copying weirdo/reference_proteome_manifests/reference-proteomes-v1.yaml -> build/lib/weirdo/reference_proteome_manifests 2026-10-27T03:05:30,036 installing to build/bdist.linux-armv7l/wheel 2026-10-27T03:05:30,037 running install 2026-10-27T03:05:30,059 running install_lib 2026-10-27T03:05:30,065 creating build/bdist.linux-armv7l/wheel 2026-10-27T03:05:30,067 creating build/bdist.linux-armv7l/wheel/scripts 2026-10-27T03:05:30,068 copying build/lib/scripts/category_data.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,071 copying build/lib/scripts/train_peptide_content_models.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,074 copying build/lib/scripts/tcell_stratified_eval.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,076 copying build/lib/scripts/viral_host_peptide_content_data.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,079 copying build/lib/scripts/check_released_model.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,080 copying build/lib/scripts/evaluate_improve_foreignness.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,083 copying build/lib/scripts/train_modal_long_run.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,086 copying build/lib/scripts/analyze_taxonomy_buckets.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,088 copying build/lib/scripts/train_category_predictor.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,091 copying build/lib/scripts/category_eval.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,093 copying build/lib/scripts/peptide_content_data.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,096 copying build/lib/scripts/category_headroom.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,098 copying build/lib/scripts/evaluate_peptide_content_immunogenicity.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,101 copying build/lib/scripts/reference_proteome_data.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,103 copying build/lib/scripts/evaluate_tcell_transfer.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,105 copying build/lib/scripts/audit_foreignness_definitions.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,107 copying build/lib/scripts/train_peptide_content_modal.py -> build/bdist.linux-armv7l/wheel/./scripts 2026-10-27T03:05:30,111 creating build/bdist.linux-armv7l/wheel/weirdo 2026-10-27T03:05:30,112 copying build/lib/weirdo/pmbec.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,114 copying build/lib/weirdo/peptide_vectorizer.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,116 copying build/lib/weirdo/peptide_content.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,117 copying build/lib/weirdo/released.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,120 copying build/lib/weirdo/reference_proteomes.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,123 creating build/bdist.linux-armv7l/wheel/weirdo/scorers 2026-10-27T03:05:30,124 copying build/lib/weirdo/scorers/trainable.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,126 copying build/lib/weirdo/scorers/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,128 copying build/lib/weirdo/scorers/peptide_features.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,131 copying build/lib/weirdo/scorers/base.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,133 copying build/lib/weirdo/scorers/swissprot.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,135 copying build/lib/weirdo/scorers/registry.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,137 copying build/lib/weirdo/scorers/mlp.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,140 copying build/lib/weirdo/scorers/config.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,142 copying build/lib/weirdo/scorers/similarity.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,145 copying build/lib/weirdo/scorers/reference.py -> build/bdist.linux-armv7l/wheel/./weirdo/scorers 2026-10-27T03:05:30,147 copying build/lib/weirdo/common.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,149 copying build/lib/weirdo/distances.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,151 creating build/bdist.linux-armv7l/wheel/weirdo/matrices 2026-10-27T03:05:30,152 copying build/lib/weirdo/matrices/BLOSUM62 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,154 copying build/lib/weirdo/matrices/amino_acid_properties.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,157 copying build/lib/weirdo/matrices/BLOSUM30 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,159 copying build/lib/weirdo/matrices/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,160 copying build/lib/weirdo/matrices/BLOSUM50 -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,162 copying build/lib/weirdo/matrices/helix_vs_coil.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,164 copying build/lib/weirdo/matrices/helix_vs_strand.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,166 copying build/lib/weirdo/matrices/strand_vs_coil.txt -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,168 copying build/lib/weirdo/matrices/pmbec.mat -> build/bdist.linux-armv7l/wheel/./weirdo/matrices 2026-10-27T03:05:30,170 copying build/lib/weirdo/amino_acid_alphabet.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,172 copying build/lib/weirdo/kmer_table.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,175 creating build/bdist.linux-armv7l/wheel/weirdo/pretrained 2026-10-27T03:05:30,177 creating build/bdist.linux-armv7l/wheel/weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:30,178 copying build/lib/weirdo/pretrained/peptide-content-v1/metadata.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:30,180 copying build/lib/weirdo/pretrained/peptide-content-v1/config.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:30,181 copying build/lib/weirdo/pretrained/peptide-content-v1/evaluation.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:30,184 copying build/lib/weirdo/pretrained/peptide-content-v1/model.pt -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/peptide-content-v1 2026-10-27T03:05:30,205 creating build/bdist.linux-armv7l/wheel/weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,206 copying build/lib/weirdo/pretrained/swissprot-categories/metadata.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,209 copying build/lib/weirdo/pretrained/swissprot-categories/config.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,211 copying build/lib/weirdo/pretrained/swissprot-categories/model.pt -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,225 copying build/lib/weirdo/pretrained/swissprot-categories/manifest.json -> build/bdist.linux-armv7l/wheel/./weirdo/pretrained/swissprot-categories 2026-10-27T03:05:30,227 copying build/lib/weirdo/amino_acid.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,229 copying build/lib/weirdo/__init__.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,231 copying build/lib/weirdo/reduced_alphabet.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,233 copying build/lib/weirdo/cli.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,236 copying build/lib/weirdo/chou_fasman.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,238 copying build/lib/weirdo/static_data.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,240 creating build/bdist.linux-armv7l/wheel/weirdo/reference_proteome_manifests 2026-10-27T03:05:30,241 copying build/lib/weirdo/reference_proteome_manifests/reference-proteomes-v1.yaml -> build/bdist.linux-armv7l/wheel/./weirdo/reference_proteome_manifests 2026-10-27T03:05:30,244 copying build/lib/weirdo/amino_acid_properties.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,246 copying build/lib/weirdo/api.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,249 copying build/lib/weirdo/uniprot.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,251 copying build/lib/weirdo/data_manager.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,254 copying build/lib/weirdo/model_manager.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,256 copying build/lib/weirdo/residue_contact_energies.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,258 copying build/lib/weirdo/blosum.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,260 copying build/lib/weirdo/score_policies.py -> build/bdist.linux-armv7l/wheel/./weirdo 2026-10-27T03:05:30,262 running install_egg_info 2026-10-27T03:05:30,267 Copying weirdo.egg-info to build/bdist.linux-armv7l/wheel/./weirdo-2.4.0-py3.11.egg-info 2026-10-27T03:05:30,279 running install_scripts 2026-10-27T03:05:30,293 creating build/bdist.linux-armv7l/wheel/weirdo-2.4.0.dist-info/WHEEL 2026-10-27T03:05:30,296 creating '/tmp/pip-wheel-_aj350qk/.tmp-ydx4cpxc/weirdo-2.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-10-27T03:05:30,299 adding 'scripts/analyze_taxonomy_buckets.py' 2026-10-27T03:05:30,301 adding 'scripts/audit_foreignness_definitions.py' 2026-10-27T03:05:30,303 adding 'scripts/category_data.py' 2026-10-27T03:05:30,305 adding 'scripts/category_eval.py' 2026-10-27T03:05:30,307 adding 'scripts/category_headroom.py' 2026-10-27T03:05:30,309 adding 'scripts/check_released_model.py' 2026-10-27T03:05:30,312 adding 'scripts/evaluate_improve_foreignness.py' 2026-10-27T03:05:30,316 adding 'scripts/evaluate_peptide_content_immunogenicity.py' 2026-10-27T03:05:30,318 adding 'scripts/evaluate_tcell_transfer.py' 2026-10-27T03:05:30,321 adding 'scripts/peptide_content_data.py' 2026-10-27T03:05:30,323 adding 'scripts/reference_proteome_data.py' 2026-10-27T03:05:30,328 adding 'scripts/tcell_stratified_eval.py' 2026-10-27T03:05:30,331 adding 'scripts/train_category_predictor.py' 2026-10-27T03:05:30,333 adding 'scripts/train_modal_long_run.py' 2026-10-27T03:05:30,336 adding 'scripts/train_peptide_content_modal.py' 2026-10-27T03:05:30,339 adding 'scripts/train_peptide_content_models.py' 2026-10-27T03:05:30,342 adding 'scripts/viral_host_peptide_content_data.py' 2026-10-27T03:05:30,344 adding 'weirdo/__init__.py' 2026-10-27T03:05:30,345 adding 'weirdo/amino_acid.py' 2026-10-27T03:05:30,347 adding 'weirdo/amino_acid_alphabet.py' 2026-10-27T03:05:30,348 adding 'weirdo/amino_acid_properties.py' 2026-10-27T03:05:30,351 adding 'weirdo/api.py' 2026-10-27T03:05:30,353 adding 'weirdo/blosum.py' 2026-10-27T03:05:30,354 adding 'weirdo/chou_fasman.py' 2026-10-27T03:05:30,358 adding 'weirdo/cli.py' 2026-10-27T03:05:30,360 adding 'weirdo/common.py' 2026-10-27T03:05:30,363 adding 'weirdo/data_manager.py' 2026-10-27T03:05:30,364 adding 'weirdo/distances.py' 2026-10-27T03:05:30,366 adding 'weirdo/kmer_table.py' 2026-10-27T03:05:30,368 adding 'weirdo/model_manager.py' 2026-10-27T03:05:30,370 adding 'weirdo/peptide_content.py' 2026-10-27T03:05:30,371 adding 'weirdo/peptide_vectorizer.py' 2026-10-27T03:05:30,372 adding 'weirdo/pmbec.py' 2026-10-27T03:05:30,374 adding 'weirdo/reduced_alphabet.py' 2026-10-27T03:05:30,376 adding 'weirdo/reference_proteomes.py' 2026-10-27T03:05:30,379 adding 'weirdo/released.py' 2026-10-27T03:05:30,380 adding 'weirdo/residue_contact_energies.py' 2026-10-27T03:05:30,382 adding 'weirdo/score_policies.py' 2026-10-27T03:05:30,384 adding 'weirdo/static_data.py' 2026-10-27T03:05:30,386 adding 'weirdo/uniprot.py' 2026-10-27T03:05:30,388 adding 'weirdo/matrices/BLOSUM30' 2026-10-27T03:05:30,390 adding 'weirdo/matrices/BLOSUM50' 2026-10-27T03:05:30,391 adding 'weirdo/matrices/BLOSUM62' 2026-10-27T03:05:30,392 adding 'weirdo/matrices/__init__.py' 2026-10-27T03:05:30,394 adding 'weirdo/matrices/amino_acid_properties.txt' 2026-10-27T03:05:30,396 adding 'weirdo/matrices/helix_vs_coil.txt' 2026-10-27T03:05:30,398 adding 'weirdo/matrices/helix_vs_strand.txt' 2026-10-27T03:05:30,399 adding 'weirdo/matrices/pmbec.mat' 2026-10-27T03:05:30,401 adding 'weirdo/matrices/strand_vs_coil.txt' 2026-10-27T03:05:30,403 adding 'weirdo/pretrained/peptide-content-v1/config.json' 2026-10-27T03:05:30,405 adding 'weirdo/pretrained/peptide-content-v1/evaluation.json' 2026-10-27T03:05:30,406 adding 'weirdo/pretrained/peptide-content-v1/metadata.json' 2026-10-27T03:05:30,483 adding 'weirdo/pretrained/peptide-content-v1/model.pt' 2026-10-27T03:05:30,490 adding 'weirdo/pretrained/swissprot-categories/config.json' 2026-10-27T03:05:30,491 adding 'weirdo/pretrained/swissprot-categories/manifest.json' 2026-10-27T03:05:30,497 adding 'weirdo/pretrained/swissprot-categories/metadata.json' 2026-10-27T03:05:30,580 adding 'weirdo/pretrained/swissprot-categories/model.pt' 2026-10-27T03:05:30,587 adding 'weirdo/reference_proteome_manifests/reference-proteomes-v1.yaml' 2026-10-27T03:05:30,589 adding 'weirdo/scorers/__init__.py' 2026-10-27T03:05:30,591 adding 'weirdo/scorers/base.py' 2026-10-27T03:05:30,592 adding 'weirdo/scorers/config.py' 2026-10-27T03:05:30,600 adding 'weirdo/scorers/mlp.py' 2026-10-27T03:05:30,604 adding 'weirdo/scorers/peptide_features.py' 2026-10-27T03:05:30,606 adding 'weirdo/scorers/reference.py' 2026-10-27T03:05:30,608 adding 'weirdo/scorers/registry.py' 2026-10-27T03:05:30,609 adding 'weirdo/scorers/similarity.py' 2026-10-27T03:05:30,612 adding 'weirdo/scorers/swissprot.py' 2026-10-27T03:05:30,613 adding 'weirdo/scorers/trainable.py' 2026-10-27T03:05:30,617 adding 'weirdo-2.4.0.dist-info/licenses/LICENSE' 2026-10-27T03:05:30,619 adding 'weirdo-2.4.0.dist-info/METADATA' 2026-10-27T03:05:30,620 adding 'weirdo-2.4.0.dist-info/WHEEL' 2026-10-27T03:05:30,621 adding 'weirdo-2.4.0.dist-info/entry_points.txt' 2026-10-27T03:05:30,622 adding 'weirdo-2.4.0.dist-info/top_level.txt' 2026-10-27T03:05:30,624 adding 'weirdo-2.4.0.dist-info/RECORD' 2026-10-27T03:05:30,644 removing build/bdist.linux-armv7l/wheel 2026-10-27T03:05:30,788 Building wheel for weirdo (pyproject.toml): finished with status 'done' 2026-10-27T03:05:30,838 Created wheel for weirdo: filename=weirdo-2.4.0-py3-none-any.whl size=1686906 sha256=ad3ec5d99e50d8fbf86fe237c3d15c3b455717c2660b7f7d46e2701049237d2c 2026-10-27T03:05:30,840 Stored in directory: /tmp/pip-ephem-wheel-cache-yfyy0qe9/wheels/27/f9/98/10151fa5e54287b98ce3f141ef6aaa11e362a4db92731e0d2e 2026-10-27T03:05:30,856 Successfully built weirdo 2026-10-27T03:05:30,899 Removed build tracker: '/tmp/pip-build-tracker-ltfegknm'