2026-10-28T18:44:19,557 Created temporary directory: /tmp/pip-ephem-wheel-cache-gcb6fd8f 2026-10-28T18:44:19,559 Created temporary directory: /tmp/pip-build-tracker-nz0zw8me 2026-10-28T18:44:19,560 Initialized build tracking at /tmp/pip-build-tracker-nz0zw8me 2026-10-28T18:44:19,560 Created build tracker: /tmp/pip-build-tracker-nz0zw8me 2026-10-28T18:44:19,561 Entered build tracker: /tmp/pip-build-tracker-nz0zw8me 2026-10-28T18:44:19,562 Created temporary directory: /tmp/pip-wheel-5lsulgup 2026-10-28T18:44:19,565 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-28T18:44:19,567 Created temporary directory: /tmp/pip-ephem-wheel-cache-51_8w6uc 2026-10-28T18:44:19,593 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-28T18:44:19,596 2 location(s) to search for versions of orfdata: 2026-10-28T18:44:19,596 * https://pypi.org/simple/orfdata/ 2026-10-28T18:44:19,596 * https://www.piwheels.org/simple/orfdata/ 2026-10-28T18:44:19,597 Fetching project page and analyzing links: https://pypi.org/simple/orfdata/ 2026-10-28T18:44:19,598 Getting page https://pypi.org/simple/orfdata/ 2026-10-28T18:44:19,599 Found index url https://pypi.org/simple 2026-10-28T18:44:19,864 Fetched page https://pypi.org/simple/orfdata/ as application/vnd.pypi.simple.v1+json 2026-10-28T18:44:19,878 Skipping link: No binaries permitted for orfdata: 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Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/0d/2b/8a1cf6202277071564f33ec9b1c23f9169b59d6b24aaaaeb07114d584f39/orfdata-0.38.2-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,931 Found link https://files.pythonhosted.org/packages/31/c7/6cbf4bd3b6313d41d9f9fe8f64318f40651c61ad793fcf2f554dd4d6bebd/orfdata-0.38.2.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.38.2 2026-10-28T18:44:19,932 Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/ee/a3/b89e60a0cbec810ca17422aec8a680bffd57c39a70b985913dad447bdae1/orfdata-0.39.0-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,933 Found link https://files.pythonhosted.org/packages/d7/c8/f6f8144382cbb4f97023936babb7b072de0e25128d9181c8114b2ca06e83/orfdata-0.39.0.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.39.0 2026-10-28T18:44:19,934 Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/4b/6b/0b41720d0bdf51527920d20c2bdac7ee80329a458e6a685f4cfcce82040f/orfdata-0.39.1-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,934 Found link https://files.pythonhosted.org/packages/c7/73/787b01d73cbd236688fc5aa5a27a87330445cdd616c30b78841163e6ff7d/orfdata-0.39.1.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.39.1 2026-10-28T18:44:19,935 Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/99/28/439d153b8b62273349b84ad0039cb3c954c37ac29810a727c88500535886/orfdata-0.40.0-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,936 Found link https://files.pythonhosted.org/packages/1f/99/bca943d4a01f16a07e1e19d9d2fea7a98ca63ac775cb62b4631efb291023/orfdata-0.40.0.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.40.0 2026-10-28T18:44:19,937 Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/2b/b1/2d1cb807b905a8ecb4036383e6932d52d8cf41b5f89778ec83a62deb015a/orfdata-0.41.0-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,938 Found link https://files.pythonhosted.org/packages/a1/d7/ab033e3637432a9f30eb9fa23cff8139bd5708e4d7eb14a1bf79715668b8/orfdata-0.41.0.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.41.0 2026-10-28T18:44:19,939 Skipping link: No binaries permitted for orfdata: https://files.pythonhosted.org/packages/52/d9/406ff9bce960a08271c306d0a0b6a65bdeecd04e8c4a5280b9fe46c9faac/orfdata-0.42.0-py3-none-any.whl (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:19,940 Found link https://files.pythonhosted.org/packages/b8/cc/8a13eb30076b53c6843ebe9b29b579333b006a61e9742930ebe7aa1f4667/orfdata-0.42.0.tar.gz (from https://pypi.org/simple/orfdata/) (requires-python:>=3.11), version: 0.42.0 2026-10-28T18:44:19,940 Fetching project page and analyzing links: https://www.piwheels.org/simple/orfdata/ 2026-10-28T18:44:19,941 Getting page https://www.piwheels.org/simple/orfdata/ 2026-10-28T18:44:19,942 Found index url https://www.piwheels.org/simple 2026-10-28T18:44:20,127 Fetched page https://www.piwheels.org/simple/orfdata/ as text/html 2026-10-28T18:44:20,138 Skipping link: No binaries permitted for orfdata: https://www.piwheels.org/simple/orfdata/orfdata-0.41.0-py3-none-any.whl#sha256=4c9aa2ac84e11a7ca46f4f7a776a09850504eeaeffecd5dac3cd09ca3556db70 (from https://www.piwheels.org/simple/orfdata/) (requires-python:>=3.11) 2026-10-28T18:44:20,138 Skipping link: No binaries permitted for orfdata: 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https://www.piwheels.org/simple/orfdata/orfdata-0.2.0-py3-none-any.whl#sha256=a889faefe720028ad527c5374560c0105d7d523a59d934e2df48a81a4d3afaf9 (from https://www.piwheels.org/simple/orfdata/) (requires-python:>=3.9) 2026-10-28T18:44:20,158 Skipping link: No binaries permitted for orfdata: https://www.piwheels.org/simple/orfdata/orfdata-0.1.0-py3-none-any.whl#sha256=15ac8bf705aaa4a152b713902cdb680ae29105f8302c3bcb9c1be544506ff01e (from https://www.piwheels.org/simple/orfdata/) (requires-python:>=3.9) 2026-10-28T18:44:20,158 Skipping link: not a file: https://www.piwheels.org/simple/orfdata/ 2026-10-28T18:44:20,159 Skipping link: not a file: https://pypi.org/simple/orfdata/ 2026-10-28T18:44:20,182 Given no hashes to check 1 links for project 'orfdata': discarding no candidates 2026-10-28T18:44:20,200 Collecting orfdata==0.42.0 2026-10-28T18:44:20,202 Created temporary directory: /tmp/pip-unpack-eyyihn8h 2026-10-28T18:44:20,428 Downloading orfdata-0.42.0.tar.gz (3.6 MB) 2026-10-28T18:44:22,027 Added orfdata==0.42.0 from https://files.pythonhosted.org/packages/b8/cc/8a13eb30076b53c6843ebe9b29b579333b006a61e9742930ebe7aa1f4667/orfdata-0.42.0.tar.gz to build tracker '/tmp/pip-build-tracker-nz0zw8me' 2026-10-28T18:44:22,034 Created temporary directory: /tmp/pip-build-env-35w7ochh 2026-10-28T18:44:22,041 Installing build dependencies: started 2026-10-28T18:44:22,042 Running command pip subprocess to install build dependencies 2026-10-28T18:44:23,201 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-10-28T18:44:23,678 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-10-28T18:44:23,702 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-10-28T18:44:25,477 Collecting setuptools>=77 2026-10-28T18:44:25,478 Obtaining dependency information for setuptools>=77 from https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata 2026-10-28T18:44:25,493 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl.metadata (6.6 kB) 2026-10-28T18:44:25,733 Collecting wheel 2026-10-28T18:44:25,734 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata 2026-10-28T18:44:25,748 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl.metadata (2.3 kB) 2026-10-28T18:44:25,932 Collecting packaging>=24.0 2026-10-28T18:44:25,933 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata 2026-10-28T18:44:25,947 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl.metadata (3.6 kB) 2026-10-28T18:44:26,140 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB) 2026-10-28T18:44:26,163 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-10-28T18:44:26,241 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-28T18:44:26,279 Using cached https://www.piwheels.org/simple/wheel/wheel-0.48.0-py3-none-any.whl (33 kB) 2026-10-28T18:44:26,307 Using cached https://www.piwheels.org/simple/packaging/packaging-26.3-py3-none-any.whl (129 kB) 2026-10-28T18:44:26,391 Using cached https://www.piwheels.org/simple/setuptools/setuptools-84.2.1-py3-none-any.whl (876 kB) 2026-10-28T18:44:29,180 Installing collected packages: setuptools, packaging, wheel 2026-10-28T18:44:32,012 Creating /tmp/pip-build-env-35w7ochh/overlay/local/bin 2026-10-28T18:44:32,014 changing mode of /tmp/pip-build-env-35w7ochh/overlay/local/bin/wheel to 755 2026-10-28T18:44:32,034 Successfully installed packaging-26.3 setuptools-84.2.1 wheel-0.48.0 2026-10-28T18:44:32,337 Installing build dependencies: finished with status 'done' 2026-10-28T18:44:32,344 Getting requirements to build wheel: started 2026-10-28T18:44:32,345 Running command Getting requirements to build wheel 2026-10-28T18:44:33,062 running egg_info 2026-10-28T18:44:33,068 writing orfdata.egg-info/PKG-INFO 2026-10-28T18:44:33,075 writing dependency_links to orfdata.egg-info/dependency_links.txt 2026-10-28T18:44:33,077 writing entry points to orfdata.egg-info/entry_points.txt 2026-10-28T18:44:33,081 writing requirements to orfdata.egg-info/requires.txt 2026-10-28T18:44:33,082 writing top-level names to orfdata.egg-info/top_level.txt 2026-10-28T18:44:33,117 reading manifest file 'orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:33,137 reading manifest template 'MANIFEST.in' 2026-10-28T18:44:33,714 adding license file 'LICENSE' 2026-10-28T18:44:33,733 writing manifest file 'orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:33,833 Getting requirements to build wheel: finished with status 'done' 2026-10-28T18:44:33,837 Created temporary directory: /tmp/pip-modern-metadata-vtbebeqx 2026-10-28T18:44:33,839 Preparing metadata (pyproject.toml): started 2026-10-28T18:44:33,840 Running command Preparing metadata (pyproject.toml) 2026-10-28T18:44:34,510 running dist_info 2026-10-28T18:44:34,521 creating /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info 2026-10-28T18:44:34,524 writing /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/PKG-INFO 2026-10-28T18:44:34,530 writing dependency_links to /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/dependency_links.txt 2026-10-28T18:44:34,533 writing entry points to /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/entry_points.txt 2026-10-28T18:44:34,536 writing requirements to /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/requires.txt 2026-10-28T18:44:34,538 writing top-level names to /tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/top_level.txt 2026-10-28T18:44:34,539 writing manifest file '/tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:34,569 reading manifest file '/tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:34,571 reading manifest template 'MANIFEST.in' 2026-10-28T18:44:35,167 adding license file 'LICENSE' 2026-10-28T18:44:35,181 writing manifest file '/tmp/pip-modern-metadata-vtbebeqx/orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:35,183 creating '/tmp/pip-modern-metadata-vtbebeqx/orfdata-0.42.0.dist-info' 2026-10-28T18:44:35,313 Preparing metadata (pyproject.toml): finished with status 'done' 2026-10-28T18:44:35,319 Source in /tmp/pip-wheel-5lsulgup/orfdata_71fdeebb922d4436b4e9c6478633c09e has version 0.42.0, which satisfies requirement orfdata==0.42.0 from https://files.pythonhosted.org/packages/b8/cc/8a13eb30076b53c6843ebe9b29b579333b006a61e9742930ebe7aa1f4667/orfdata-0.42.0.tar.gz 2026-10-28T18:44:35,319 Removed orfdata==0.42.0 from https://files.pythonhosted.org/packages/b8/cc/8a13eb30076b53c6843ebe9b29b579333b006a61e9742930ebe7aa1f4667/orfdata-0.42.0.tar.gz from build tracker '/tmp/pip-build-tracker-nz0zw8me' 2026-10-28T18:44:35,326 Created temporary directory: /tmp/pip-unpack-4g9lvy_l 2026-10-28T18:44:35,326 Building wheels for collected packages: orfdata 2026-10-28T18:44:35,331 Created temporary directory: /tmp/pip-wheel-rpzrahu5 2026-10-28T18:44:35,332 Destination directory: /tmp/pip-wheel-rpzrahu5 2026-10-28T18:44:35,334 Building wheel for orfdata (pyproject.toml): started 2026-10-28T18:44:35,336 Running command Building wheel for orfdata (pyproject.toml) 2026-10-28T18:44:35,993 running bdist_wheel 2026-10-28T18:44:36,011 running build 2026-10-28T18:44:36,011 running build_py 2026-10-28T18:44:36,018 creating build/lib/orfdata 2026-10-28T18:44:36,020 copying orfdata/genomes_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,022 copying orfdata/cli_output.py -> build/lib/orfdata 2026-10-28T18:44:36,024 copying orfdata/_pinned_genome.py -> build/lib/orfdata 2026-10-28T18:44:36,026 copying orfdata/liftover_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,029 copying orfdata/viral_registry.py -> build/lib/orfdata 2026-10-28T18:44:36,031 copying orfdata/reference.py -> build/lib/orfdata 2026-10-28T18:44:36,033 copying orfdata/_structure.py -> build/lib/orfdata 2026-10-28T18:44:36,035 copying orfdata/dataset_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,038 copying orfdata/install.py -> build/lib/orfdata 2026-10-28T18:44:36,040 copying orfdata/download_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,043 copying orfdata/fasta.py -> build/lib/orfdata 2026-10-28T18:44:36,045 copying orfdata/version.py -> build/lib/orfdata 2026-10-28T18:44:36,046 copying orfdata/genbank.py -> build/lib/orfdata 2026-10-28T18:44:36,049 copying orfdata/measurements.py -> build/lib/orfdata 2026-10-28T18:44:36,051 copying orfdata/model.py -> build/lib/orfdata 2026-10-28T18:44:36,054 copying orfdata/build.py -> build/lib/orfdata 2026-10-28T18:44:36,057 copying orfdata/proteome.py -> build/lib/orfdata 2026-10-28T18:44:36,062 copying orfdata/evidence.py -> build/lib/orfdata 2026-10-28T18:44:36,064 copying orfdata/dataset.py -> build/lib/orfdata 2026-10-28T18:44:36,067 copying orfdata/data_resources.py -> build/lib/orfdata 2026-10-28T18:44:36,070 copying orfdata/refseq.py -> build/lib/orfdata 2026-10-28T18:44:36,072 copying orfdata/search_reference.py -> build/lib/orfdata 2026-10-28T18:44:36,075 copying orfdata/evidence_summary.py -> build/lib/orfdata 2026-10-28T18:44:36,078 copying orfdata/catalog_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,080 copying orfdata/downloads.py -> build/lib/orfdata 2026-10-28T18:44:36,083 copying orfdata/viral_annotation.py -> build/lib/orfdata 2026-10-28T18:44:36,086 copying orfdata/catalog_manifest.py -> build/lib/orfdata 2026-10-28T18:44:36,089 copying orfdata/cli.py -> build/lib/orfdata 2026-10-28T18:44:36,092 copying orfdata/viral_coverage.py -> build/lib/orfdata 2026-10-28T18:44:36,095 copying orfdata/viral_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,098 copying orfdata/catalog.py -> build/lib/orfdata 2026-10-28T18:44:36,101 copying orfdata/initiation_context.py -> build/lib/orfdata 2026-10-28T18:44:36,104 copying orfdata/catalogs.py -> build/lib/orfdata 2026-10-28T18:44:36,107 copying orfdata/reference_mapping.py -> build/lib/orfdata 2026-10-28T18:44:36,109 copying orfdata/__init__.py -> build/lib/orfdata 2026-10-28T18:44:36,112 copying orfdata/sequence.py -> build/lib/orfdata 2026-10-28T18:44:36,114 copying orfdata/viral_panel.py -> build/lib/orfdata 2026-10-28T18:44:36,118 copying orfdata/net.py -> build/lib/orfdata 2026-10-28T18:44:36,120 copying orfdata/pairing.py -> build/lib/orfdata 2026-10-28T18:44:36,123 copying orfdata/gtf.py -> build/lib/orfdata 2026-10-28T18:44:36,125 copying orfdata/proteome_cli.py -> build/lib/orfdata 2026-10-28T18:44:36,128 copying orfdata/viral.py -> build/lib/orfdata 2026-10-28T18:44:36,130 copying orfdata/artifact_archives.py -> build/lib/orfdata 2026-10-28T18:44:36,133 copying orfdata/genomes.py -> build/lib/orfdata 2026-10-28T18:44:36,135 copying orfdata/liftover.py -> build/lib/orfdata 2026-10-28T18:44:36,138 copying orfdata/rna.py -> build/lib/orfdata 2026-10-28T18:44:36,141 copying orfdata/datasets.py -> build/lib/orfdata 2026-10-28T18:44:36,144 copying orfdata/numeric_vector.py -> build/lib/orfdata 2026-10-28T18:44:36,146 copying orfdata/record_sources.py -> build/lib/orfdata 2026-10-28T18:44:36,149 copying orfdata/viral_subsets.py -> build/lib/orfdata 2026-10-28T18:44:36,151 copying orfdata/reference_ledger.py -> build/lib/orfdata 2026-10-28T18:44:36,154 copying orfdata/reference_table.py -> build/lib/orfdata 2026-10-28T18:44:36,157 creating build/lib/orfdata/sources 2026-10-28T18:44:36,158 copying orfdata/sources/pfizer_vendor.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,161 copying orfdata/sources/pfizer_definitions.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,164 copying orfdata/sources/pfizer_evidence.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,166 copying orfdata/sources/peptideatlas.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,169 copying orfdata/sources/copy.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,172 copying orfdata/sources/pfizer_native.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,175 copying orfdata/sources/pfizer_lineage.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,178 copying orfdata/sources/riborf.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,181 copying orfdata/sources/wang.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,184 copying orfdata/sources/ingolia.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,186 copying orfdata/sources/pfizer_queries.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,189 copying orfdata/sources/__init__.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,192 copying orfdata/sources/pfizer_dataset.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,194 copying orfdata/sources/ncorf_mammals.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,197 copying orfdata/sources/openprot.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,200 copying orfdata/sources/kaabinejadian.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,203 copying orfdata/sources/pfizer_rna.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,205 copying orfdata/sources/pfizer_attribution.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,208 copying orfdata/sources/pfizer.py -> build/lib/orfdata/sources 2026-10-28T18:44:36,213 running egg_info 2026-10-28T18:44:36,223 writing orfdata.egg-info/PKG-INFO 2026-10-28T18:44:36,230 writing dependency_links to orfdata.egg-info/dependency_links.txt 2026-10-28T18:44:36,231 writing entry points to orfdata.egg-info/entry_points.txt 2026-10-28T18:44:36,235 writing requirements to orfdata.egg-info/requires.txt 2026-10-28T18:44:36,236 writing top-level names to orfdata.egg-info/top_level.txt 2026-10-28T18:44:36,258 reading manifest file 'orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:36,279 reading manifest template 'MANIFEST.in' 2026-10-28T18:44:36,856 adding license file 'LICENSE' 2026-10-28T18:44:36,875 writing manifest file 'orfdata.egg-info/SOURCES.txt' 2026-10-28T18:44:36,892 creating build/lib/orfdata/data/uorf-evidence 2026-10-28T18:44:36,894 copying orfdata/data/uorf-evidence/NOTICE.txt -> build/lib/orfdata/data/uorf-evidence 2026-10-28T18:44:36,897 copying orfdata/data/uorf-evidence/catalog.json.gz -> build/lib/orfdata/data/uorf-evidence 2026-10-28T18:44:36,915 copying orfdata/data/uorf-evidence/AUTHOR-LICENSE.txt -> build/lib/orfdata/data/uorf-evidence 2026-10-28T18:44:36,917 copying orfdata/data/uorf-evidence/manifest.json -> build/lib/orfdata/data/uorf-evidence 2026-10-28T18:44:36,919 creating build/lib/orfdata/data/orf-evidence 2026-10-28T18:44:36,921 copying orfdata/data/orf-evidence/NOTICE.txt -> build/lib/orfdata/data/orf-evidence 2026-10-28T18:44:36,924 copying orfdata/data/orf-evidence/catalog.json.gz -> build/lib/orfdata/data/orf-evidence 2026-10-28T18:44:36,953 copying orfdata/data/orf-evidence/AUTHOR-LICENSE.txt -> build/lib/orfdata/data/orf-evidence 2026-10-28T18:44:36,955 copying orfdata/data/orf-evidence/manifest.json -> build/lib/orfdata/data/orf-evidence 2026-10-28T18:44:36,957 creating build/lib/orfdata/data/ires 2026-10-28T18:44:36,958 copying orfdata/data/ires/rfam-15.1-human-ires.json -> build/lib/orfdata/data/ires 2026-10-28T18:44:36,961 creating build/lib/orfdata/data/viral 2026-10-28T18:44:36,962 copying orfdata/data/viral/gdc-grch38-d1-vd1-coverage.tsv -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,965 copying orfdata/data/viral/gdc-grch38-d1-vd1-genbank.tsv -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,968 copying orfdata/data/viral/gdc-grch38-d1-vd1-pave.tsv -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,971 copying orfdata/data/viral/NOTICE.md -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,974 copying orfdata/data/viral/subsets.yaml -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,976 copying orfdata/data/viral/hpv16-refseq-CDS.json.gz -> build/lib/orfdata/data/viral 2026-10-28T18:44:36,979 copying orfdata/data/datasets.json -> build/lib/orfdata/data 2026-10-28T18:44:36,984 copying orfdata/data/catalogs.json -> build/lib/orfdata/data 2026-10-28T18:44:36,988 copying orfdata/data/chains.json -> build/lib/orfdata/data 2026-10-28T18:44:36,990 copying orfdata/data/genomes.json -> build/lib/orfdata/data 2026-10-28T18:44:37,013 installing to build/bdist.linux-armv7l/wheel 2026-10-28T18:44:37,014 running install 2026-10-28T18:44:37,035 running install_lib 2026-10-28T18:44:37,041 creating build/bdist.linux-armv7l/wheel 2026-10-28T18:44:37,044 creating build/bdist.linux-armv7l/wheel/orfdata 2026-10-28T18:44:37,045 copying build/lib/orfdata/genomes_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,048 copying build/lib/orfdata/cli_output.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,049 copying build/lib/orfdata/_pinned_genome.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,051 copying build/lib/orfdata/liftover_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,054 copying build/lib/orfdata/viral_registry.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,056 copying build/lib/orfdata/reference.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,058 copying build/lib/orfdata/_structure.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,060 copying build/lib/orfdata/dataset_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,063 copying build/lib/orfdata/install.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,065 copying build/lib/orfdata/download_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,067 copying build/lib/orfdata/fasta.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,069 copying build/lib/orfdata/version.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,071 copying build/lib/orfdata/genbank.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,073 copying build/lib/orfdata/measurements.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,075 copying build/lib/orfdata/model.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,079 copying build/lib/orfdata/build.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,082 copying build/lib/orfdata/proteome.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,087 copying build/lib/orfdata/evidence.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,089 copying build/lib/orfdata/dataset.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,092 copying build/lib/orfdata/data_resources.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,095 creating build/bdist.linux-armv7l/wheel/orfdata/sources 2026-10-28T18:44:37,096 copying build/lib/orfdata/sources/pfizer_vendor.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,099 copying build/lib/orfdata/sources/pfizer_definitions.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,101 copying build/lib/orfdata/sources/pfizer_evidence.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,104 copying build/lib/orfdata/sources/peptideatlas.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,106 copying build/lib/orfdata/sources/copy.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,109 copying build/lib/orfdata/sources/pfizer_native.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,112 copying build/lib/orfdata/sources/pfizer_lineage.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,114 copying build/lib/orfdata/sources/riborf.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,117 copying build/lib/orfdata/sources/wang.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,119 copying build/lib/orfdata/sources/ingolia.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,122 copying build/lib/orfdata/sources/pfizer_queries.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,124 copying build/lib/orfdata/sources/__init__.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,126 copying build/lib/orfdata/sources/pfizer_dataset.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,129 copying build/lib/orfdata/sources/ncorf_mammals.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,131 copying build/lib/orfdata/sources/openprot.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,133 copying build/lib/orfdata/sources/kaabinejadian.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,136 copying build/lib/orfdata/sources/pfizer_rna.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,138 copying build/lib/orfdata/sources/pfizer_attribution.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,141 copying build/lib/orfdata/sources/pfizer.py -> build/bdist.linux-armv7l/wheel/./orfdata/sources 2026-10-28T18:44:37,143 copying build/lib/orfdata/refseq.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,145 copying build/lib/orfdata/search_reference.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,148 copying build/lib/orfdata/evidence_summary.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,150 copying build/lib/orfdata/catalog_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,152 copying build/lib/orfdata/downloads.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,154 copying build/lib/orfdata/viral_annotation.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,157 copying build/lib/orfdata/catalog_manifest.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,159 copying build/lib/orfdata/cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,161 copying build/lib/orfdata/viral_coverage.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,164 copying build/lib/orfdata/viral_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,166 copying build/lib/orfdata/catalog.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,170 copying build/lib/orfdata/initiation_context.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,172 copying build/lib/orfdata/catalogs.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,175 copying build/lib/orfdata/reference_mapping.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,177 copying build/lib/orfdata/__init__.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,179 copying build/lib/orfdata/sequence.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,182 copying build/lib/orfdata/viral_panel.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,185 copying build/lib/orfdata/net.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,188 creating build/bdist.linux-armv7l/wheel/orfdata/data 2026-10-28T18:44:37,189 creating build/bdist.linux-armv7l/wheel/orfdata/data/ires 2026-10-28T18:44:37,190 copying build/lib/orfdata/data/ires/rfam-15.1-human-ires.json -> build/bdist.linux-armv7l/wheel/./orfdata/data/ires 2026-10-28T18:44:37,194 creating build/bdist.linux-armv7l/wheel/orfdata/data/uorf-evidence 2026-10-28T18:44:37,195 copying build/lib/orfdata/data/uorf-evidence/NOTICE.txt -> build/bdist.linux-armv7l/wheel/./orfdata/data/uorf-evidence 2026-10-28T18:44:37,197 copying build/lib/orfdata/data/uorf-evidence/catalog.json.gz -> build/bdist.linux-armv7l/wheel/./orfdata/data/uorf-evidence 2026-10-28T18:44:37,209 copying build/lib/orfdata/data/uorf-evidence/AUTHOR-LICENSE.txt -> build/bdist.linux-armv7l/wheel/./orfdata/data/uorf-evidence 2026-10-28T18:44:37,211 copying build/lib/orfdata/data/uorf-evidence/manifest.json -> build/bdist.linux-armv7l/wheel/./orfdata/data/uorf-evidence 2026-10-28T18:44:37,213 copying build/lib/orfdata/data/genomes.json -> build/bdist.linux-armv7l/wheel/./orfdata/data 2026-10-28T18:44:37,216 creating build/bdist.linux-armv7l/wheel/orfdata/data/viral 2026-10-28T18:44:37,217 copying build/lib/orfdata/data/viral/gdc-grch38-d1-vd1-coverage.tsv -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,219 copying build/lib/orfdata/data/viral/gdc-grch38-d1-vd1-genbank.tsv -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,222 copying build/lib/orfdata/data/viral/gdc-grch38-d1-vd1-pave.tsv -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,225 copying build/lib/orfdata/data/viral/NOTICE.md -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,227 copying build/lib/orfdata/data/viral/subsets.yaml -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,229 copying build/lib/orfdata/data/viral/hpv16-refseq-CDS.json.gz -> build/bdist.linux-armv7l/wheel/./orfdata/data/viral 2026-10-28T18:44:37,231 copying build/lib/orfdata/data/datasets.json -> build/bdist.linux-armv7l/wheel/./orfdata/data 2026-10-28T18:44:37,236 copying build/lib/orfdata/data/chains.json -> build/bdist.linux-armv7l/wheel/./orfdata/data 2026-10-28T18:44:37,238 copying build/lib/orfdata/data/catalogs.json -> build/bdist.linux-armv7l/wheel/./orfdata/data 2026-10-28T18:44:37,242 creating build/bdist.linux-armv7l/wheel/orfdata/data/orf-evidence 2026-10-28T18:44:37,243 copying build/lib/orfdata/data/orf-evidence/NOTICE.txt -> build/bdist.linux-armv7l/wheel/./orfdata/data/orf-evidence 2026-10-28T18:44:37,246 copying build/lib/orfdata/data/orf-evidence/catalog.json.gz -> build/bdist.linux-armv7l/wheel/./orfdata/data/orf-evidence 2026-10-28T18:44:37,273 copying build/lib/orfdata/data/orf-evidence/AUTHOR-LICENSE.txt -> build/bdist.linux-armv7l/wheel/./orfdata/data/orf-evidence 2026-10-28T18:44:37,276 copying build/lib/orfdata/data/orf-evidence/manifest.json -> build/bdist.linux-armv7l/wheel/./orfdata/data/orf-evidence 2026-10-28T18:44:37,278 copying build/lib/orfdata/pairing.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,281 copying build/lib/orfdata/gtf.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,283 copying build/lib/orfdata/proteome_cli.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,286 copying build/lib/orfdata/viral.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,289 copying build/lib/orfdata/artifact_archives.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,291 copying build/lib/orfdata/genomes.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,294 copying build/lib/orfdata/liftover.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,297 copying build/lib/orfdata/rna.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,300 copying build/lib/orfdata/datasets.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,303 copying build/lib/orfdata/numeric_vector.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,305 copying build/lib/orfdata/record_sources.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,308 copying build/lib/orfdata/viral_subsets.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,311 copying build/lib/orfdata/reference_ledger.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,314 copying build/lib/orfdata/reference_table.py -> build/bdist.linux-armv7l/wheel/./orfdata 2026-10-28T18:44:37,316 running install_egg_info 2026-10-28T18:44:37,323 Copying orfdata.egg-info to build/bdist.linux-armv7l/wheel/./orfdata-0.42.0-py3.11.egg-info 2026-10-28T18:44:37,338 running install_scripts 2026-10-28T18:44:37,353 creating build/bdist.linux-armv7l/wheel/orfdata-0.42.0.dist-info/WHEEL 2026-10-28T18:44:37,356 creating '/tmp/pip-wheel-rpzrahu5/.tmp-6ptm58aq/orfdata-0.42.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-10-28T18:44:37,361 adding 'orfdata/__init__.py' 2026-10-28T18:44:37,362 adding 'orfdata/_pinned_genome.py' 2026-10-28T18:44:37,365 adding 'orfdata/_structure.py' 2026-10-28T18:44:37,367 adding 'orfdata/artifact_archives.py' 2026-10-28T18:44:37,372 adding 'orfdata/build.py' 2026-10-28T18:44:37,382 adding 'orfdata/catalog.py' 2026-10-28T18:44:37,384 adding 'orfdata/catalog_cli.py' 2026-10-28T18:44:37,386 adding 'orfdata/catalog_manifest.py' 2026-10-28T18:44:37,388 adding 'orfdata/catalogs.py' 2026-10-28T18:44:37,391 adding 'orfdata/cli.py' 2026-10-28T18:44:37,392 adding 'orfdata/cli_output.py' 2026-10-28T18:44:37,394 adding 'orfdata/data_resources.py' 2026-10-28T18:44:37,399 adding 'orfdata/dataset.py' 2026-10-28T18:44:37,401 adding 'orfdata/dataset_cli.py' 2026-10-28T18:44:37,404 adding 'orfdata/datasets.py' 2026-10-28T18:44:37,406 adding 'orfdata/download_cli.py' 2026-10-28T18:44:37,409 adding 'orfdata/downloads.py' 2026-10-28T18:44:37,411 adding 'orfdata/evidence.py' 2026-10-28T18:44:37,413 adding 'orfdata/evidence_summary.py' 2026-10-28T18:44:37,414 adding 'orfdata/fasta.py' 2026-10-28T18:44:37,416 adding 'orfdata/genbank.py' 2026-10-28T18:44:37,417 adding 'orfdata/genomes.py' 2026-10-28T18:44:37,419 adding 'orfdata/genomes_cli.py' 2026-10-28T18:44:37,420 adding 'orfdata/gtf.py' 2026-10-28T18:44:37,422 adding 'orfdata/initiation_context.py' 2026-10-28T18:44:37,424 adding 'orfdata/install.py' 2026-10-28T18:44:37,427 adding 'orfdata/liftover.py' 2026-10-28T18:44:37,429 adding 'orfdata/liftover_cli.py' 2026-10-28T18:44:37,431 adding 'orfdata/measurements.py' 2026-10-28T18:44:37,437 adding 'orfdata/model.py' 2026-10-28T18:44:37,439 adding 'orfdata/net.py' 2026-10-28T18:44:37,440 adding 'orfdata/numeric_vector.py' 2026-10-28T18:44:37,443 adding 'orfdata/pairing.py' 2026-10-28T18:44:37,459 adding 'orfdata/proteome.py' 2026-10-28T18:44:37,461 adding 'orfdata/proteome_cli.py' 2026-10-28T18:44:37,463 adding 'orfdata/record_sources.py' 2026-10-28T18:44:37,466 adding 'orfdata/reference.py' 2026-10-28T18:44:37,468 adding 'orfdata/reference_ledger.py' 2026-10-28T18:44:37,469 adding 'orfdata/reference_mapping.py' 2026-10-28T18:44:37,471 adding 'orfdata/reference_table.py' 2026-10-28T18:44:37,473 adding 'orfdata/refseq.py' 2026-10-28T18:44:37,475 adding 'orfdata/rna.py' 2026-10-28T18:44:37,477 adding 'orfdata/search_reference.py' 2026-10-28T18:44:37,479 adding 'orfdata/sequence.py' 2026-10-28T18:44:37,480 adding 'orfdata/version.py' 2026-10-28T18:44:37,482 adding 'orfdata/viral.py' 2026-10-28T18:44:37,485 adding 'orfdata/viral_annotation.py' 2026-10-28T18:44:37,487 adding 'orfdata/viral_cli.py' 2026-10-28T18:44:37,489 adding 'orfdata/viral_coverage.py' 2026-10-28T18:44:37,495 adding 'orfdata/viral_panel.py' 2026-10-28T18:44:37,498 adding 'orfdata/viral_registry.py' 2026-10-28T18:44:37,499 adding 'orfdata/viral_subsets.py' 2026-10-28T18:44:37,503 adding 'orfdata/data/catalogs.json' 2026-10-28T18:44:37,505 adding 'orfdata/data/chains.json' 2026-10-28T18:44:37,514 adding 'orfdata/data/datasets.json' 2026-10-28T18:44:37,517 adding 'orfdata/data/genomes.json' 2026-10-28T18:44:37,520 adding 'orfdata/data/ires/rfam-15.1-human-ires.json' 2026-10-28T18:44:37,522 adding 'orfdata/data/orf-evidence/AUTHOR-LICENSE.txt' 2026-10-28T18:44:37,524 adding 'orfdata/data/orf-evidence/NOTICE.txt' 2026-10-28T18:44:37,678 adding 'orfdata/data/orf-evidence/catalog.json.gz' 2026-10-28T18:44:37,690 adding 'orfdata/data/orf-evidence/manifest.json' 2026-10-28T18:44:37,692 adding 'orfdata/data/uorf-evidence/AUTHOR-LICENSE.txt' 2026-10-28T18:44:37,693 adding 'orfdata/data/uorf-evidence/NOTICE.txt' 2026-10-28T18:44:37,773 adding 'orfdata/data/uorf-evidence/catalog.json.gz' 2026-10-28T18:44:37,780 adding 'orfdata/data/uorf-evidence/manifest.json' 2026-10-28T18:44:37,782 adding 'orfdata/data/viral/NOTICE.md' 2026-10-28T18:44:37,785 adding 'orfdata/data/viral/gdc-grch38-d1-vd1-coverage.tsv' 2026-10-28T18:44:37,790 adding 'orfdata/data/viral/gdc-grch38-d1-vd1-genbank.tsv' 2026-10-28T18:44:37,795 adding 'orfdata/data/viral/gdc-grch38-d1-vd1-pave.tsv' 2026-10-28T18:44:37,797 adding 'orfdata/data/viral/hpv16-refseq-CDS.json.gz' 2026-10-28T18:44:37,798 adding 'orfdata/data/viral/subsets.yaml' 2026-10-28T18:44:37,800 adding 'orfdata/sources/__init__.py' 2026-10-28T18:44:37,804 adding 'orfdata/sources/copy.py' 2026-10-28T18:44:37,806 adding 'orfdata/sources/ingolia.py' 2026-10-28T18:44:37,809 adding 'orfdata/sources/kaabinejadian.py' 2026-10-28T18:44:37,811 adding 'orfdata/sources/ncorf_mammals.py' 2026-10-28T18:44:37,813 adding 'orfdata/sources/openprot.py' 2026-10-28T18:44:37,815 adding 'orfdata/sources/peptideatlas.py' 2026-10-28T18:44:37,817 adding 'orfdata/sources/pfizer.py' 2026-10-28T18:44:37,820 adding 'orfdata/sources/pfizer_attribution.py' 2026-10-28T18:44:37,823 adding 'orfdata/sources/pfizer_dataset.py' 2026-10-28T18:44:37,825 adding 'orfdata/sources/pfizer_definitions.py' 2026-10-28T18:44:37,827 adding 'orfdata/sources/pfizer_evidence.py' 2026-10-28T18:44:37,829 adding 'orfdata/sources/pfizer_lineage.py' 2026-10-28T18:44:37,831 adding 'orfdata/sources/pfizer_native.py' 2026-10-28T18:44:37,833 adding 'orfdata/sources/pfizer_queries.py' 2026-10-28T18:44:37,835 adding 'orfdata/sources/pfizer_rna.py' 2026-10-28T18:44:37,838 adding 'orfdata/sources/pfizer_vendor.py' 2026-10-28T18:44:37,840 adding 'orfdata/sources/riborf.py' 2026-10-28T18:44:37,843 adding 'orfdata/sources/wang.py' 2026-10-28T18:44:37,847 adding 'orfdata-0.42.0.dist-info/licenses/LICENSE' 2026-10-28T18:44:37,850 adding 'orfdata-0.42.0.dist-info/METADATA' 2026-10-28T18:44:37,851 adding 'orfdata-0.42.0.dist-info/WHEEL' 2026-10-28T18:44:37,852 adding 'orfdata-0.42.0.dist-info/entry_points.txt' 2026-10-28T18:44:37,853 adding 'orfdata-0.42.0.dist-info/top_level.txt' 2026-10-28T18:44:37,854 adding 'orfdata-0.42.0.dist-info/RECORD' 2026-10-28T18:44:37,879 removing build/bdist.linux-armv7l/wheel 2026-10-28T18:44:38,003 Building wheel for orfdata (pyproject.toml): finished with status 'done' 2026-10-28T18:44:38,063 Created wheel for orfdata: filename=orfdata-0.42.0-py3-none-any.whl size=2282464 sha256=26f6cd1a31c662897f458f49767b46b58431111961fe7a5b6097a03448cc17ae 2026-10-28T18:44:38,064 Stored in directory: /tmp/pip-ephem-wheel-cache-51_8w6uc/wheels/d6/d8/75/79ea02466ca7eee6ad2ab7b405500ae92d7f4ac16dee8af335 2026-10-28T18:44:38,080 Successfully built orfdata 2026-10-28T18:44:38,140 Removed build tracker: '/tmp/pip-build-tracker-nz0zw8me'