piwheels

biodbs

biodbs is a Python library providing unified access to major biological and chemical databases with built-in support for ID translation and enrichment analysis.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install biodbs

Dependencies

• pyyaml
• tqdm
• polars
• scipy
• pandas
• pydantic
• aiohttp
• requests

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
0.4.1	2026-07-19
biodbs-0.4.1-py3-none-any.whl (465 KB)
0.4.0	2026-07-05
biodbs-0.4.0-py3-none-any.whl (461 KB)
0.3.1	2026-06-21
biodbs-0.3.1-py3-none-any.whl (423 KB)
0.3.0	2026-04-04
biodbs-0.3.0-py3-none-any.whl (422 KB)
0.2.1	2026-02-11
biodbs-0.2.1-py3-none-any.whl (386 KB)
0.2.0	2026-02-08
biodbs-0.2.0-py3-none-any.whl (289 KB)
0.0.1	2021-05-19
biodbs-0.0.1-py3-none-any.whl (12 KB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue