piwheels

bpnet

BPNet: toolkit to learn motif synthax from high-resolution functional genomics data using convolutional neural networks

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install bpnet

Dependencies

• pandas
• py2bit
• plotly
• deepdish
• tqdm
• pyfaidx
• hdf5plugin
• deeplift
• kundajelab-shap
• matplotlib
• scikit-image
• tensorflow-probability
• pysam
• deeptools
• scipy
• scikit-learn
• tensorflow

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
2.0.0	2025-09-23
bpnet-2.0.0-py3-none-any.whl (91 KB)
0.0.23	2020-07-05
bpnet-0.0.23-py3-none-any.whl (3 MB)
0.0.22	2019-09-02
bpnet-0.0.22-py3-none-any.whl (3 MB)
0.0.21	2019-08-08
bpnet-0.0.21-py3-none-any.whl (5 MB)
0.0.20	2019-08-08
bpnet-0.0.20-py3-none-any.whl (5 MB)
0.0.19	2019-08-07
bpnet-0.0.19-py3-none-any.whl (3 MB)
0.0.18	2019-08-07
bpnet-0.0.18-py3-none-any.whl (3 MB)
0.0.17	2019-08-07
bpnet-0.0.17-py3-none-any.whl (3 MB)
0.0.16	2019-08-07
bpnet-0.0.16-py3-none-any.whl (3 MB)
0.0.15	2019-08-07
bpnet-0.0.15-py3-none-any.whl (3 MB)
0.0.14	2019-08-07
bpnet-0.0.14-py3-none-any.whl (3 MB)
0.0.13	2019-08-07
bpnet-0.0.13-py3-none-any.whl (3 MB)
0.0.12	2019-08-07
bpnet-0.0.12-py3-none-any.whl (3 MB)
0.0.11	2019-08-07
bpnet-0.0.11-py3-none-any.whl (3 MB)
0.0.10	2019-08-06
bpnet-0.0.10-py3-none-any.whl (3 MB)
0.0.9	2019-08-06
bpnet-0.0.9-py3-none-any.whl (5 MB)
0.0.8	2019-08-05
bpnet-0.0.8-py3-none-any.whl (5 MB)
0.0.7	2019-08-05
bpnet-0.0.7-py3-none-any.whl (5 MB)
0.0.6	2019-08-05
bpnet-0.0.6-py3-none-any.whl (5 MB)
0.0.5	2019-08-05
bpnet-0.0.5-py3-none-any.whl (5 MB)
0.0.4	2019-08-05
bpnet-0.0.4-py3-none-any.whl (5 MB)
0.0.3	2019-08-05
bpnet-0.0.3-py3-none-any.whl (5 MB)
0.0.2	2019-08-03
bpnet-0.0.2-py3-none-any.whl (3 MB)
0.0.1	2019-08-03
bpnet-0.0.1-py3-none-any.whl (3 MB)

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