piwheels

genotype

genotype provides an automated pipipeline for comparinggenotypes from different assays.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install genotype

Dependencies

• sqlalchemy
• flask-bootstrap
• flask-sqlalchemy
• ruamel-yaml
• flask
• xlrd
• pymysql
• click
• flask-dance
• coloredlogs
• flask-login
• cyvcf2
• werkzeug
• cython
• pysam
• pyyaml
• flask-reverse-proxy
• flask-security
• flask-alchy
• alchy

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
3.0.0	2020-09-23
genotype-3.0.0-py3-none-any.whl (30 KB)
2.5.2	2020-09-22
genotype-2.5.2-py3-none-any.whl (31 KB)
2.5.1	2020-09-16
genotype-2.5.1-py3-none-any.whl (29 KB)
2.5.0	2020-09-16
genotype-2.5.0-py3-none-any.whl (29 KB)
2.2.1	2017-09-28
genotype-2.2.1-py2.py3-none-any.whl (28 KB)
2.2.0	2017-09-04
genotype-2.2.0-py2.py3-none-any.whl (28 KB)
2.1.0	2017-05-08
genotype-2.1.0-py2.py3-none-any.whl (26 KB)
2.0.1	2017-01-02
genotype-2.0.1-py2.py3-none-any.whl (59 KB)
2.0.0	2017-01-02
genotype-2.0.0-py2.py3-none-any.whl (59 KB)

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