piwheels

harmonypy

Batch correction for single-cell data using the Harmony algorithm with a C++ Armadillo backend.

Installation

In a virtualenv (see these instructions if you need to create one):

sudo apt install libopenblas0-pthread libgfortran5
pip3 install harmonypy

Dependencies

• numpy

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
2.0.0	2026-04-26
harmonypy-2.0.0-cp39-cp39-linux_armv6l.whl (129 KB) harmonypy-2.0.0-cp39-cp39-linux_armv7l.whl (129 KB) harmonypy-2.0.0-cp311-cp311-linux_armv6l.whl (123 KB) harmonypy-2.0.0-cp311-cp311-linux_armv7l.whl (123 KB) harmonypy-2.0.0-cp313-cp313-linux_armv6l.whl (126 KB) harmonypy-2.0.0-cp313-cp313-linux_armv7l.whl (126 KB)
0.2.0	2026-01-09
harmonypy-0.2.0-py3-none-any.whl (23 KB)
0.1.0	2026-01-09
harmonypy-0.1.0-py3-none-any.whl (22 KB)
0.0.10	2024-07-04
harmonypy-0.0.10-py3-none-any.whl (20 KB)
0.0.9	2022-11-23
harmonypy-0.0.9-py3-none-any.whl (20 KB)
0.0.6	2022-07-30
harmonypy-0.0.6-py3-none-any.whl (20 KB)
0.0.5	2020-08-11
harmonypy-0.0.5-py3-none-any.whl (20 KB)
0.0.4	2020-03-03
harmonypy-0.0.4-py3-none-any.whl (20 KB)
0.0.3	2019-12-26
harmonypy-0.0.3-py3-none-any.whl (19 KB)
0.0.2	2019-12-20
0.0.1	2019-12-19
harmonypy-0.0.1-py3-none-any.whl (16 KB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue