HTSeq

A framework to process and analyze data from high-throughput sequencing (HTS) assays

Installation

In a virtualenv (see these instructions if you need to create one):

sudo apt install libstdc++6 libc6 libgcc-s1
pip3 install htseq

Dependencies

PyPI page
pypi.org/project/htseq
Project JSON
piwheels.org/project/htseq/json
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Python 3.9		 Bookworm
Python 3.11		 Trixie
Python 3.13		 Files
2.1.2 2026-02-04      
2.0.9 2024-09-12      
2.0.8 2024-07-03      
2.0.7 2024-06-04      
2.0.5 2023-12-13      
2.0.4 2023-08-01      
2.0.3 2023-05-16      
2.0.2 2022-07-02      
2.0.1 2022-03-25      
2.0.0 2022-03-24      
1.99.2 2021-11-19      
0.13.5 2020-12-29      
0.13.4 2020-12-29      
0.12.4 2020-04-19      
0.12.3 2020-04-18      
0.11.4 2020-03-30      
0.11.3 2020-03-01      
0.11.2 2019-01-08      
0.11.1 2019-01-03      
0.11.0 2018-09-07      
0.10.0 2018-05-11      
0.9.1 2017-07-27      
0.9.0 2017-07-14      
0.8.0 2017-06-07      
0.7.2 2017-03-25      
0.7.1 2017-03-17      
0.6.1 2014-02-27      
0.6.0 2014-02-26      
0.5.4 2013-02-21      
0.5.3 2011-06-29      
0.5.0 2011-04-21      
0.4.7 2010-12-22      
0.4.6 2010-12-09      
0.4.5 2010-09-29      
0.4.4 2010-05-19      
0.4.3 2010-05-01      
0.4.2 2010-04-19      
0.4.1 2010-04-19      
0.4.0 2010-04-07      
0.3.7 2010-03-11      
0.5.4p5 2013-10-10      
0.5.4p3 2013-04-29      
0.5.4p2 2013-04-18      
0.5.4p1 2013-02-22      
0.5.3p7 2012-06-13      
0.5.3p6 2012-06-11      
0.5.3p5 2012-05-29      
0.5.3p3 2011-09-15      
0.5.3p2 2011-09-15      
0.5.3p1 2011-07-15      
0.5.1p3 2011-06-22      
0.5.1p2 2011-05-12      
0.5.1p1 2011-05-11      
0.5.0p4 2011-05-03      
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0.5.0p2 2011-04-22      
0.5.0p1 2011-04-22      
0.4.7p4 2011-03-18      
0.4.7p3 2011-03-15      
0.4.7p2 2011-03-13      
0.4.7p1 2011-02-14      
0.4.6p2 2010-12-21      
0.4.6p1 2010-12-17      
0.4.5p7 2010-11-16      
0.4.5p6 2010-11-02      
0.4.5p5 2010-10-28      
0.4.5p4 2010-10-21      
0.4.5p3 2010-10-20      
0.4.5p1 2010-10-08      
0.4.4p6 2010-07-21      
0.4.4p5 2010-07-13      
0.4.4p4 2010-07-12      
0.4.4p3 2010-06-25      
0.4.4p2 2010-06-05      
0.4.4p1 2010-05-26      
0.4.3-p4 2010-05-17      
0.4.3-p3 2010-05-16      
0.4.3-p2 2010-05-15      
0.4.3-p1 2010-05-04      
0.4.2-p5 2010-04-30      
0.4.2-p4 2010-04-29      
0.4.2-p3 2010-04-26      
0.4.2-p2 2010-04-23      
0.4.2-p1 2010-04-20      

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Page last updated 2026-05-12 18:51:26 UTC