piwheels

mDeepFRI

Pipeline for searching and aligning contact maps for proteins, and function prediction with DeepFRI.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install mdeepfri

Dependencies

• biotite
• tqdm
• foldcomp
• click
• pysam
• numpy
• onnxruntime-gpu
• pyopal

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
1.2.0	2026-08-17
1.1.10	2026-01-16
1.1.9	2026-01-08
1.1.8	2024-06-26
mDeepFRI-1.1.8-cp311-cp311-linux_armv6l.whl (44 MB) mDeepFRI-1.1.8-cp311-cp311-linux_armv7l.whl (44 MB) mDeepFRI-1.1.8-cp39-cp39-linux_armv6l.whl (44 MB) mDeepFRI-1.1.8-cp39-cp39-linux_armv7l.whl (44 MB)
1.1.7	2024-06-11
mDeepFRI-1.1.7-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.7-cp311-cp311-linux_armv7l.whl (3 MB) mdeepfri-1.1.7-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.7-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.6	2024-06-04
mDeepFRI-1.1.6-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.6-cp311-cp311-linux_armv7l.whl (3 MB) mdeepfri-1.1.6-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.6-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.5	2024-04-01
mDeepFRI-1.1.5-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.5-cp311-cp311-linux_armv7l.whl (3 MB) mDeepFRI-1.1.5-cp37-cp37m-linux_armv6l.whl (2 MB) mDeepFRI-1.1.5-cp37-cp37m-linux_armv7l.whl (2 MB) mDeepFRI-1.1.5-cp39-cp39-linux_armv6l.whl (3 MB) mDeepFRI-1.1.5-cp39-cp39-linux_armv7l.whl (3 MB) mdeepfri-1.1.5-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.5-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.4	2024-03-23
mDeepFRI-1.1.4-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.4-cp311-cp311-linux_armv7l.whl (3 MB) mDeepFRI-1.1.4-cp37-cp37m-linux_armv6l.whl (2 MB) mDeepFRI-1.1.4-cp37-cp37m-linux_armv7l.whl (2 MB) mDeepFRI-1.1.4-cp39-cp39-linux_armv6l.whl (3 MB) mDeepFRI-1.1.4-cp39-cp39-linux_armv7l.whl (3 MB) mdeepfri-1.1.4-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.4-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.3	2024-03-13
mDeepFRI-1.1.3-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.3-cp311-cp311-linux_armv7l.whl (3 MB) mDeepFRI-1.1.3-cp37-cp37m-linux_armv6l.whl (2 MB) mDeepFRI-1.1.3-cp37-cp37m-linux_armv7l.whl (2 MB) mDeepFRI-1.1.3-cp39-cp39-linux_armv6l.whl (3 MB) mDeepFRI-1.1.3-cp39-cp39-linux_armv7l.whl (3 MB) mdeepfri-1.1.3-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.3-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.2	2024-02-23
mDeepFRI-1.1.2-cp311-cp311-linux_armv6l.whl (3 MB) mDeepFRI-1.1.2-cp311-cp311-linux_armv7l.whl (3 MB) mDeepFRI-1.1.2-cp37-cp37m-linux_armv6l.whl (2 MB) mDeepFRI-1.1.2-cp37-cp37m-linux_armv7l.whl (2 MB) mDeepFRI-1.1.2-cp39-cp39-linux_armv6l.whl (3 MB) mDeepFRI-1.1.2-cp39-cp39-linux_armv7l.whl (3 MB) mdeepfri-1.1.2-cp313-cp313-linux_armv6l.whl (3 MB) mdeepfri-1.1.2-cp313-cp313-linux_armv7l.whl (3 MB)
1.1.1	2024-01-03
mDeepFRI-1.1.1-cp311-cp311-linux_armv6l.whl (2 MB) mDeepFRI-1.1.1-cp311-cp311-linux_armv7l.whl (2 MB) mDeepFRI-1.1.1-cp37-cp37m-linux_armv6l.whl (2 MB) mDeepFRI-1.1.1-cp37-cp37m-linux_armv7l.whl (2 MB) mDeepFRI-1.1.1-cp39-cp39-linux_armv6l.whl (2 MB) mDeepFRI-1.1.1-cp39-cp39-linux_armv7l.whl (2 MB)

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