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nagini3D

Implementation of NAGINI-3D, a python package designed for Multi-Object Segmentation in Biological Imaging based on deep learning and active surfaces.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install nagini3d

Dependencies

• scipy
• einops
• scikit-image
• csbdeep
• omegaconf

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.2.3	2026-03-26
nagini3d-0.2.3-py3-none-any.whl (45 KB)
0.2.2	2025-12-06
nagini3d-0.2.2-py3-none-any.whl (45 KB)
0.2.1	2025-12-05
nagini3d-0.2.1-py3-none-any.whl (45 KB)
0.2.0	2025-12-05
nagini3d-0.2.0-py3-none-any.whl (45 KB)
0.1.2	2025-08-28
nagini3d-0.1.2-py3-none-any.whl (41 KB)
0.1.1	2025-06-10
nagini3d-0.1.1-py3-none-any.whl (41 KB)
0.0.2	2025-03-06
nagini3d-0.0.2-py3-none-any.whl (38 KB)
0.0.1	2025-03-04
nagini3d-0.0.1-py3-none-any.whl (41 KB)

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