piwheels

nanocompore

Software package that identifies raw signal changes between two conditions from dRNA-Seq data.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install nanocompore

Dependencies

• gmm-gpu
• tqdm
• matplotlib
• pynvml
• scipy
• gtfparse
• ont-remora
• pod5
• pysam
• numpy
• jaxtyping
• pyfaidx
• pyyaml
• schema
• statsmodels
• loguru
• seaborn
• scikit-learn
• pandas

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
2.2.0	2026-01-12
nanocompore-2.2.0-py3-none-any.whl (3 MB)
2.0.0	2025-05-20
1.0.4	2021-05-27
nanocompore-1.0.4-py3-none-any.whl (227 KB)
1.0.3	2021-01-15
nanocompore-1.0.3-py3-none-any.whl (226 KB)
1.0.2	2020-12-18
nanocompore-1.0.2-py3-none-any.whl (226 KB)
1.0.1	2020-11-27
nanocompore-1.0.1-py3-none-any.whl (220 KB)
1.0.0rc3.post2 pre-release	2020-05-01
nanocompore-1.0.0rc3.post2-py3-none-any.whl (220 KB)
1.0.0rc3.post1 pre-release	2019-11-20
nanocompore-1.0.0rc3.post1-py3-none-any.whl (220 KB)

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