piwheels

ont-remora

Nanopore methylation/modified base calling detached from basecalling

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install ont-remora

Dependencies

• plotnine
• tqdm
• torch
• pysam
• parasail
• polars
• scikit-learn
• toml
• pod5
• importlib-resources
• numpy
• thop
• requests

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
3.3.0	2024-09-17
ont_remora-3.3.0-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.3.0-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.3.0-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.3.0-cp39-cp39-linux_armv7l.whl (1 MB)
3.2.2	2024-08-17
ont_remora-3.2.2-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.2.2-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.2.2-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.2.2-cp39-cp39-linux_armv7l.whl (1 MB)
3.2.1	2024-08-16
ont_remora-3.2.1-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.2.1-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.2.1-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.2.1-cp39-cp39-linux_armv7l.whl (1 MB)
3.2.0	2024-05-21
ont_remora-3.2.0-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.2.0-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.2.0-cp37-cp37m-linux_armv6l.whl (529 KB) ont_remora-3.2.0-cp37-cp37m-linux_armv7l.whl (529 KB) ont_remora-3.2.0-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.2.0-cp39-cp39-linux_armv7l.whl (1 MB) ont_remora-3.2.0-cp313-cp313-linux_armv6l.whl (1 MB) ont_remora-3.2.0-cp313-cp313-linux_armv7l.whl (1 MB)
3.1.0	2023-12-05
ont_remora-3.1.0-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.1.0-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.1.0-cp37-cp37m-linux_armv6l.whl (522 KB) ont_remora-3.1.0-cp37-cp37m-linux_armv7l.whl (522 KB) ont_remora-3.1.0-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.1.0-cp39-cp39-linux_armv7l.whl (1 MB)
3.0.0	2023-11-15
ont_remora-3.0.0-cp37-cp37m-linux_armv6l.whl (520 KB) ont_remora-3.0.0-cp37-cp37m-linux_armv7l.whl (520 KB) ont_remora-3.0.0-cp311-cp311-linux_armv6l.whl (1 MB) ont_remora-3.0.0-cp311-cp311-linux_armv7l.whl (1 MB) ont_remora-3.0.0-cp39-cp39-linux_armv6l.whl (1 MB) ont_remora-3.0.0-cp39-cp39-linux_armv7l.whl (1 MB)
2.1.3	2023-07-24
ont_remora-2.1.3-cp37-cp37m-linux_armv6l.whl (374 KB) ont_remora-2.1.3-cp37-cp37m-linux_armv7l.whl (374 KB) ont_remora-2.1.3-cp39-cp39-linux_armv6l.whl (850 KB) ont_remora-2.1.3-cp39-cp39-linux_armv7l.whl (850 KB) ont_remora-2.1.3-cp311-cp311-linux_armv6l.whl (887 KB) ont_remora-2.1.3-cp311-cp311-linux_armv7l.whl (887 KB)
2.1.2	2023-06-05
ont_remora-2.1.2-cp37-cp37m-linux_armv6l.whl (338 KB) ont_remora-2.1.2-cp37-cp37m-linux_armv7l.whl (338 KB) ont_remora-2.1.2-cp39-cp39-linux_armv6l.whl (759 KB) ont_remora-2.1.2-cp39-cp39-linux_armv7l.whl (759 KB)
2.1.1	2023-05-18
ont_remora-2.1.1-cp37-cp37m-linux_armv6l.whl (338 KB) ont_remora-2.1.1-cp37-cp37m-linux_armv7l.whl (338 KB) ont_remora-2.1.1-cp39-cp39-linux_armv6l.whl (758 KB) ont_remora-2.1.1-cp39-cp39-linux_armv7l.whl (758 KB)
2.1.0	2023-05-04
ont_remora-2.1.0-cp37-cp37m-linux_armv6l.whl (338 KB) ont_remora-2.1.0-cp37-cp37m-linux_armv7l.whl (338 KB) ont_remora-2.1.0-cp39-cp39-linux_armv6l.whl (758 KB) ont_remora-2.1.0-cp39-cp39-linux_armv7l.whl (758 KB)
2.0.0	2022-12-06
ont_remora-2.0.0-cp39-cp39-linux_armv6l.whl (743 KB) ont_remora-2.0.0-cp39-cp39-linux_armv7l.whl (743 KB) ont_remora-2.0.0-cp37-cp37m-linux_armv6l.whl (322 KB) ont_remora-2.0.0-cp37-cp37m-linux_armv7l.whl (322 KB)
1.1.1	2022-06-16
ont_remora-1.1.1-cp35-cp35m-linux_armv6l.whl (41 MB) ont_remora-1.1.1-cp35-cp35m-linux_armv7l.whl (41 MB) ont_remora-1.1.1-cp37-cp37m-linux_armv6l.whl (41 MB) ont_remora-1.1.1-cp37-cp37m-linux_armv7l.whl (41 MB) ont_remora-1.1.1-cp39-cp39-linux_armv6l.whl (42 MB) ont_remora-1.1.1-cp39-cp39-linux_armv7l.whl (42 MB)
1.1.0	2022-05-18
ont_remora-1.1.0-cp35-cp35m-linux_armv6l.whl (41 MB) ont_remora-1.1.0-cp35-cp35m-linux_armv7l.whl (41 MB) ont_remora-1.1.0-cp37-cp37m-linux_armv6l.whl (41 MB) ont_remora-1.1.0-cp37-cp37m-linux_armv7l.whl (41 MB) ont_remora-1.1.0-cp39-cp39-linux_armv6l.whl (42 MB) ont_remora-1.1.0-cp39-cp39-linux_armv7l.whl (42 MB)
1.0.0	2022-03-25
ont_remora-1.0.0-cp35-cp35m-linux_armv6l.whl (18 MB) ont_remora-1.0.0-cp35-cp35m-linux_armv7l.whl (18 MB) ont_remora-1.0.0-cp37-cp37m-linux_armv6l.whl (17 MB) ont_remora-1.0.0-cp37-cp37m-linux_armv7l.whl (17 MB) ont_remora-1.0.0-cp39-cp39-linux_armv6l.whl (18 MB) ont_remora-1.0.0-cp39-cp39-linux_armv7l.whl (18 MB)
0.1.2	2022-01-26
ont_remora-0.1.2-cp311-cp311-linux_armv6l.whl (15 MB) ont_remora-0.1.2-cp311-cp311-linux_armv7l.whl (15 MB) ont_remora-0.1.2-cp35-cp35m-linux_armv6l.whl (14 MB) ont_remora-0.1.2-cp35-cp35m-linux_armv7l.whl (14 MB) ont_remora-0.1.2-cp39-cp39-linux_armv6l.whl (15 MB) ont_remora-0.1.2-cp39-cp39-linux_armv7l.whl (15 MB) ont_remora-0.1.2-cp37-cp37m-linux_armv6l.whl (14 MB) ont_remora-0.1.2-cp37-cp37m-linux_armv7l.whl (14 MB) ont_remora-0.1.2-cp313-cp313-linux_armv6l.whl (15 MB) ont_remora-0.1.2-cp313-cp313-linux_armv7l.whl (15 MB)
0.1.1	2021-12-01
ont_remora-0.1.1-cp311-cp311-linux_armv6l.whl (15 MB) ont_remora-0.1.1-cp311-cp311-linux_armv7l.whl (15 MB) ont_remora-0.1.1-cp35-cp35m-linux_armv6l.whl (14 MB) ont_remora-0.1.1-cp35-cp35m-linux_armv7l.whl (14 MB) ont_remora-0.1.1-cp37-cp37m-linux_armv6l.whl (15 MB) ont_remora-0.1.1-cp37-cp37m-linux_armv7l.whl (15 MB) ont_remora-0.1.1-cp39-cp39-linux_armv6l.whl (15 MB) ont_remora-0.1.1-cp39-cp39-linux_armv7l.whl (15 MB) ont_remora-0.1.1-cp313-cp313-linux_armv6l.whl (15 MB) ont_remora-0.1.1-cp313-cp313-linux_armv7l.whl (15 MB)
0.1.0	2021-11-30
ont_remora-0.1.0-cp311-cp311-linux_armv6l.whl (15 MB) ont_remora-0.1.0-cp311-cp311-linux_armv7l.whl (15 MB) ont_remora-0.1.0-cp37-cp37m-linux_armv6l.whl (15 MB) ont_remora-0.1.0-cp37-cp37m-linux_armv7l.whl (15 MB) ont_remora-0.1.0-cp39-cp39-linux_armv6l.whl (15 MB) ont_remora-0.1.0-cp39-cp39-linux_armv7l.whl (15 MB) ont_remora-0.1.0-cp35-cp35m-linux_armv6l.whl (14 MB) ont_remora-0.1.0-cp35-cp35m-linux_armv7l.whl (14 MB) ont_remora-0.1.0-cp313-cp313-linux_armv6l.whl (15 MB) ont_remora-0.1.0-cp313-cp313-linux_armv7l.whl (15 MB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue