piwheels

pairtools

CLI tools to process mapped Hi-C data

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install pairtools

Dependencies

• bioframe
• pyyaml
• cython
• click
• pysam
• numpy
• scipy
• pandas

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
1.1.2	2024-12-11
pairtools-1.1.2-cp311-cp311-linux_armv6l.whl (979 KB) pairtools-1.1.2-cp311-cp311-linux_armv7l.whl (979 KB) pairtools-1.1.2-cp39-cp39-linux_armv6l.whl (932 KB) pairtools-1.1.2-cp39-cp39-linux_armv7l.whl (932 KB)
1.1.1	2024-12-10
pairtools-1.1.1-cp311-cp311-linux_armv6l.whl (1 MB) pairtools-1.1.1-cp311-cp311-linux_armv7l.whl (1 MB) pairtools-1.1.1-cp39-cp39-linux_armv6l.whl (1 MB) pairtools-1.1.1-cp39-cp39-linux_armv7l.whl (1 MB)
1.1.0	2024-04-23
1.0.3	2023-11-20
1.0.2	2022-11-08
1.0.1	2022-09-07
1.0.0	2022-08-24
0.3.0	2019-07-13
pairtools-0.3.0-cp34-cp34m-linux_armv7l.whl (387 KB) pairtools-0.3.0-cp34-cp34m-linux_armv6l.whl (387 KB) pairtools-0.3.0-cp35-cp35m-linux_armv6l.whl (365 KB) pairtools-0.3.0-cp35-cp35m-linux_armv7l.whl (365 KB) pairtools-0.3.0-cp39-cp39-linux_armv6l.whl (469 KB) pairtools-0.3.0-cp39-cp39-linux_armv7l.whl (469 KB) pairtools-0.3.0-cp37-cp37m-linux_armv7l.whl (432 KB) pairtools-0.3.0-cp37-cp37m-linux_armv6l.whl (432 KB) pairtools-0.3.0-cp313-cp313-linux_armv6l.whl (574 KB) pairtools-0.3.0-cp313-cp313-linux_armv7l.whl (574 KB)
0.2.2	2019-01-07
pairtools-0.2.2-cp39-cp39-linux_armv6l.whl (467 KB) pairtools-0.2.2-cp39-cp39-linux_armv7l.whl (467 KB) pairtools-0.2.2-cp37-cp37m-linux_armv6l.whl (434 KB) pairtools-0.2.2-cp37-cp37m-linux_armv7l.whl (434 KB) pairtools-0.2.2-cp34-cp34m-linux_armv6l.whl (397 KB) pairtools-0.2.2-cp34-cp34m-linux_armv7l.whl (397 KB) pairtools-0.2.2-cp35-cp35m-linux_armv7l.whl (369 KB) pairtools-0.2.2-cp35-cp35m-linux_armv6l.whl (369 KB) pairtools-0.2.2-cp313-cp313-linux_armv6l.whl (573 KB) pairtools-0.2.2-cp313-cp313-linux_armv7l.whl (573 KB)
0.2.1	2018-12-21
pairtools-0.2.1-cp39-cp39-linux_armv6l.whl (467 KB) pairtools-0.2.1-cp39-cp39-linux_armv7l.whl (467 KB) pairtools-0.2.1-cp37-cp37m-linux_armv6l.whl (434 KB) pairtools-0.2.1-cp37-cp37m-linux_armv7l.whl (434 KB) pairtools-0.2.1-cp34-cp34m-linux_armv6l.whl (397 KB) pairtools-0.2.1-cp34-cp34m-linux_armv7l.whl (397 KB) pairtools-0.2.1-cp35-cp35m-linux_armv7l.whl (369 KB) pairtools-0.2.1-cp35-cp35m-linux_armv6l.whl (369 KB) pairtools-0.2.1-cp313-cp313-linux_armv6l.whl (572 KB) pairtools-0.2.1-cp313-cp313-linux_armv7l.whl (572 KB)
0.2.0	2018-08-03
pairtools-0.2.0-cp39-cp39-linux_armv6l.whl (467 KB) pairtools-0.2.0-cp39-cp39-linux_armv7l.whl (467 KB) pairtools-0.2.0-cp37-cp37m-linux_armv6l.whl (434 KB) pairtools-0.2.0-cp37-cp37m-linux_armv7l.whl (434 KB) pairtools-0.2.0-cp34-cp34m-linux_armv7l.whl (396 KB) pairtools-0.2.0-cp34-cp34m-linux_armv6l.whl (396 KB) pairtools-0.2.0-cp35-cp35m-linux_armv7l.whl (368 KB) pairtools-0.2.0-cp35-cp35m-linux_armv6l.whl (368 KB) pairtools-0.2.0-cp313-cp313-linux_armv6l.whl (572 KB) pairtools-0.2.0-cp313-cp313-linux_armv7l.whl (572 KB)
0.1.1	2018-07-19
pairtools-0.1.1-cp39-cp39-linux_armv6l.whl (465 KB) pairtools-0.1.1-cp39-cp39-linux_armv7l.whl (465 KB) pairtools-0.1.1-cp37-cp37m-linux_armv6l.whl (432 KB) pairtools-0.1.1-cp37-cp37m-linux_armv7l.whl (432 KB) pairtools-0.1.1-cp34-cp34m-linux_armv7l.whl (394 KB) pairtools-0.1.1-cp34-cp34m-linux_armv6l.whl (394 KB) pairtools-0.1.1-cp35-cp35m-linux_armv6l.whl (366 KB) pairtools-0.1.1-cp35-cp35m-linux_armv7l.whl (366 KB) pairtools-0.1.1-cp313-cp313-linux_armv6l.whl (571 KB) pairtools-0.1.1-cp313-cp313-linux_armv7l.whl (571 KB)
0.1.0	2018-07-19
pairtools-0.1.0-py3-none-any.whl (45 KB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue