piwheels

pyscenic

Python implementation of the SCENIC pipeline for transcription factor inference from single-cell transcriptomics experiments.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install pyscenic

Dependencies

• numexpr
• tqdm
• cloudpickle
• interlap
• scipy
• umap-learn
• fsspec
• arboreto
• networkx
• llvmlite
• aiohttp
• boltons
• frozendict
• ctxcore
• attrs
• distributed
• cytoolz
• numpy
• multiprocessing-on-dill
• requests
• numba
• pyyaml
• loompy
• scikit-learn
• pandas
• setuptools
• dask

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
0.12.1	2022-11-21
pyscenic-0.12.1-py3-none-any.whl (7 MB)
0.12.0	2022-08-16
pyscenic-0.12.0-py3-none-any.whl (7 MB)
0.11.2	2021-05-07
0.11.1	2021-04-16
pyscenic-0.11.1-py3-none-any.whl (7 MB)
0.11.0	2021-02-10
pyscenic-0.11.0-py3-none-any.whl (7 MB)
0.10.4	2020-11-24
pyscenic-0.10.4-py3-none-any.whl (7 MB)
0.10.3	2020-07-17
pyscenic-0.10.3-py3-none-any.whl (7 MB)
0.10.2	2020-06-05
pyscenic-0.10.2-py3-none-any.whl (7 MB)
0.10.1	2020-05-17
pyscenic-0.10.1-py3-none-any.whl (7 MB)
0.10.0	2020-02-27
0.9.19	2019-10-09
0.9.18	2019-09-25
0.9.17	2019-09-19
0.9.16	2019-08-21
0.9.15	2019-07-28
0.9.14	2019-07-12
pyscenic-0.9.14-py3-none-any.whl (14 MB)
0.9.13	2019-07-07
0.9.12	2019-07-07
0.9.11	2019-06-23
0.9.10	2019-06-14
0.9.9	2019-05-10
pyscenic-0.9.9-py3-none-any.whl (14 MB)
0.9.8	2019-04-29
pyscenic-0.9.8-py3-none-any.whl (14 MB)
0.9.7	2019-03-21
pyscenic-0.9.7-py3-none-any.whl (14 MB)
0.9.6	2019-03-10
pyscenic-0.9.6-py3-none-any.whl (14 MB)
0.9.5	2019-02-12
pyscenic-0.9.5-py3-none-any.whl (14 MB)
0.9.4	2019-01-24
pyscenic-0.9.4-py3-none-any.whl (14 MB)
0.9.3	2019-01-16
pyscenic-0.9.3-py3-none-any.whl (14 MB)
0.9.2	2019-01-14
pyscenic-0.9.2-py3-none-any.whl (14 MB)
0.9.1	2018-12-20
pyscenic-0.9.1-py3-none-any.whl (14 MB)
0.9.0	2018-12-18
pyscenic-0.9.0-py3-none-any.whl (14 MB)
0.8.16	2018-12-04
pyscenic-0.8.16-py3-none-any.whl (14 MB)
0.8.15	2018-12-04
pyscenic-0.8.15-py3-none-any.whl (14 MB)
0.8.14	2018-11-29
pyscenic-0.8.14-py3-none-any.whl (14 MB)
0.8.13	2018-11-28
pyscenic-0.8.13-py3-none-any.whl (14 MB)
0.8.12	2018-11-26
pyscenic-0.8.12-py3-none-any.whl (14 MB)
0.8.11	2018-11-05
pyscenic-0.8.11-py3-none-any.whl (14 MB)
0.8.10	2018-11-05
pyscenic-0.8.10-py3-none-any.whl (14 MB)
0.8.9	2018-08-22
pyscenic-0.8.9-py3-none-any.whl (14 MB)
0.8.8	2018-08-02
pyscenic-0.8.8-py3-none-any.whl (14 MB)
0.8.7	2018-07-12
pyscenic-0.8.7-py3-none-any.whl (14 MB)
0.8.6	2018-06-27
pyscenic-0.8.6-py3-none-any.whl (14 MB)
0.8.5	2018-06-14
pyscenic-0.8.5-py3-none-any.whl (14 MB)
0.8.4	2018-05-03
pyscenic-0.8.4-py3-none-any.whl (14 MB)
0.8.3	2018-05-02
pyscenic-0.8.3-py3-none-any.whl (14 MB)
0.8.2	2018-05-01
pyscenic-0.8.2-py3-none-any.whl (14 MB)
0.8.1	2018-04-28
pyscenic-0.8.1-py3-none-any.whl (14 MB)
0.8.0	2018-04-27
pyscenic-0.8.0-py3-none-any.whl (14 MB)
0.7.2	2018-04-23
pyscenic-0.7.2-py3-none-any.whl (14 MB)
0.7.1	2018-04-18
pyscenic-0.7.1-py3-none-any.whl (14 MB)
0.7.0	2018-04-17
pyscenic-0.7.0-py3-none-any.whl (14 MB)
0.6.14	2018-04-05
pyscenic-0.6.14-py3-none-any.whl (7 MB)
0.6.12	2018-03-27
pyscenic-0.6.12-py3-none-any.whl (7 MB)
0.6.11	2018-03-26
pyscenic-0.6.11-py3-none-any.whl (7 MB)
0.6.10	2018-03-23
pyscenic-0.6.10-py3-none-any.whl (7 MB)
0.6.9	2018-03-22
pyscenic-0.6.9-py3-none-any.whl (7 MB)
0.6.8	2018-03-22
pyscenic-0.6.8-py3-none-any.whl (7 MB)
0.6.7	2018-03-20
pyscenic-0.6.7-py3-none-any.whl (3 MB)
0.6.6	2018-03-20
pyscenic-0.6.6-py3-none-any.whl (3 MB)
0.6.5	2018-03-19
pyscenic-0.6.5-py3-none-any.whl (3 MB)
0.6.4	2018-03-17
pyscenic-0.6.4-py3-none-any.whl (3 MB)
0.6.3	2018-03-16
pyscenic-0.6.3-py3-none-any.whl (3 MB)
0.6.2	2018-03-16
pyscenic-0.6.2-py3-none-any.whl (3 MB)
0.6.1	2018-03-16
pyscenic-0.6.1-py3-none-any.whl (3 MB)

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