piwheels

pyvariant

Map biological sequence variants (mutations) to their equivalent chromosome, cDNA, gene, exon, protein, and RNA positions.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install pyvariant

Dependencies

• gtfparse
• biopython
• polars
• packaging
• pandas
• appdirs
• pyfaidx
• pyarrow

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
2.2.4	2023-12-21
pyvariant-2.2.4-py3-none-any.whl (50 KB)
2.2.3	2023-09-28
pyvariant-2.2.3-py3-none-any.whl (49 KB)
2.2.2	2023-09-22
pyvariant-2.2.2-py3-none-any.whl (49 KB)
2.2.1	2023-06-02
pyvariant-2.2.1-py3-none-any.whl (47 KB)
2.2.0	2023-06-01
pyvariant-2.2.0-py3-none-any.whl (46 KB)
2.1.0	2023-05-26
pyvariant-2.1.0-py3-none-any.whl (45 KB)
2.0.0	2023-05-15
pyvariant-2.0.0-py3-none-any.whl (45 KB)

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