piwheels

refgenie

Refgenie creates a standardized folder structure for reference genome files and indexes

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install refgenie

Dependencies

• piper
• rich
• refgenconf
• yacman
• logmuse
• pyfaidx
• ubiquerg

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.13.0	2026-02-25
refgenie-0.13.0-py3-none-any.whl (32 KB)
0.12.1	2021-11-04
refgenie-0.12.1-py3-none-any.whl (33 KB)
0.12.0	2021-06-28
refgenie-0.12.0-py3-none-any.whl (33 KB)
0.11.0	2021-04-27
refgenie-0.11.0-py3-none-any.whl (30 KB)
0.10.0	2021-03-11
refgenie-0.10.0-py3-none-any.whl (29 KB)
0.9.3	2020-07-29
refgenie-0.9.3-py3-none-any.whl (27 KB)
0.9.2	2020-07-01
refgenie-0.9.2-py3-none-any.whl (26 KB)
0.9.1	2020-05-01
refgenie-0.9.1-py3-none-any.whl (25 KB)
0.9.0	2020-03-17
refgenie-0.9.0-py3-none-any.whl (25 KB)
0.8.2	2020-01-08
refgenie-0.8.2-py3-none-any.whl (25 KB)
0.8.1	2019-12-13
refgenie-0.8.1-py3-none-any.whl (25 KB)
0.8.0	2019-12-06
refgenie-0.8.0-py3-none-any.whl (25 KB)
0.7.2	2019-11-06
refgenie-0.7.2-py3-none-any.whl (22 KB)
0.7.1	2019-10-29
refgenie-0.7.1-py3-none-any.whl (21 KB)
0.7.0	2019-10-21
refgenie-0.7.0-py3-none-any.whl (21 KB)
0.6.0	2019-08-05
refgenie-0.6.0-py3-none-any.whl (13 KB)
0.5.0	2019-07-11
refgenie-0.5.0-py3-none-any.whl (12 KB)
0.4.4	2019-07-01
refgenie-0.4.4-py3-none-any.whl (11 KB)
0.4.3	2019-06-21
refgenie-0.4.3-py3-none-any.whl (11 KB)
0.4.2	2019-06-19
refgenie-0.4.2-py3-none-any.whl (8 KB)
0.4.1	2019-06-14
refgenie-0.4.1-py3-none-any.whl (9 KB)
0.4.0	2019-06-14
refgenie-0.4.0-py3-none-any.whl (9 KB)
0.3.2	2019-05-14
refgenie-0.3.2-py3-none-any.whl (5 KB)
0.3.1	2019-05-14
refgenie-0.3.1-py3-none-any.whl (6 KB)
0.3.0	2019-05-10
refgenie-0.3.0-py3-none-any.whl (6 KB)
0.0.1	2018-07-02
refgenie-0.0.1-py3-none-any.whl (1 KB)

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