piwheels

sistr-cmd

Serovar predictions from Salmonella whole-genome sequence assemblies by determination of antigen geneand cgMLST gene alleles using BLAST. Mash MinHash can also be used for serovar prediction.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install sistr-cmd

Dependencies

• scipy
• tables
• pycurl
• numpy
• pandas

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
1.1.3	2024-12-05
1.1.2	2023-02-09
1.1.1	2020-04-30
sistr_cmd-1.1.1-py3-none-any.whl (48 MB)
1.1.0	2019-11-28
sistr_cmd-1.1.0-py3-none-any.whl (48 MB)
1.0.2	2017-05-23
sistr_cmd-1.0.2-py3-none-any.whl (47 MB)
1.0.1	2017-05-23
sistr_cmd-1.0.1-py3-none-any.whl (47 MB)
0.3.6	2017-04-13
sistr_cmd-0.3.6-py3-none-any.whl (26 MB)
0.3.5	2017-04-13
sistr_cmd-0.3.5-py3-none-any.whl (26 MB)
0.3.4	2017-02-23
sistr_cmd-0.3.4-py3-none-any.whl (26 MB)
0.3.3	2017-02-21
sistr_cmd-0.3.3-py3-none-any.whl (26 MB)
0.3.2	2017-02-21
sistr_cmd-0.3.2-py3-none-any.whl (26 MB)
0.3.1	2017-02-13
sistr_cmd-0.3.1-py3-none-any.whl (26 MB)
0.3.0	2017-02-01
sistr_cmd-0.3.0-py3-none-any.whl (26 MB)

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