piwheels

smallgenomeutilities

A collection of scripts that are useful for dealing with viral RNA NGS data.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install smallgenomeutilities

Dependencies

• biopython
• pysam
• scipy
• pyyaml
• pysamstats
• matplotlib
• scikit-learn
• progress
• more-itertools
• numpy
• bcbio-gff
• pandas

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.5.2	2025-05-27
smallgenomeutilities-0.5.2-py3-none-any.whl (79 KB)
0.5.1	2025-04-24
smallgenomeutilities-0.5.1-py3-none-any.whl (78 KB)
0.4.1	2024-05-27
smallgenomeutilities-0.4.1-py3-none-any.whl (77 KB)
0.4.0	2023-08-03
smallgenomeutilities-0.4.0-py3-none-any.whl (76 KB)
0.3.0	2020-04-02
smallgenomeutilities-0.3.0-py3-none-any.whl (47 KB)
0.2.1	2017-11-13
smallgenomeutilities-0.2.1-py3-none-any.whl (38 KB)
0.2	2017-11-09
smallgenomeutilities-0.2-py3-none-any.whl (36 KB)
0.1	2017-06-02
smallgenomeutilities-0.1-py3-none-any.whl (31 KB)

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