{"package": "sonnia", "summary": "SoNNia is a Python 3 software developed to infer selection pressures on features of amino acid CDR3 sequences. SoNNia takes as input TCR CDR3 amino acid sequences with  V and J genes. Its output is s\u2026", "pypi_url": "https://pypi.org/project/sonnia", "piwheels_url": "https://www.piwheels.org/project/sonnia", "releases": {"0.4.0": {"released": "2025-11-18 15:02:10", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.4.0-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.4.0-py3-none-any.whl", "filehash": "33f27a4ad1759b70fce9540b105f28cce9ff53fb8e5f0a2d9fbb4a1dcf00acec", "filesize": 1918459, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": ">=3.9", "apt_dependencies": [], "pip_dependencies": ["keras", "matplotlib", "numpy", "olga", "pandas", "polars", "scipy", "torch", "tqdm", "typer"]}}}, "0.3.1": {"released": "2024-08-16 06:42:44", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.3.1-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.3.1-py3-none-any.whl", "filehash": "c50752cb7542d1541538676e56fa7bfddbfffeac38a06b31f58417e81b30f3a6", "filesize": 1800863, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": ">=3.9", "apt_dependencies": [], "pip_dependencies": ["keras", "matplotlib", "numpy", "olga", "pandas", "scikit-learn", "scipy", "seaborn", "tensorflow", "tqdm"]}}}, "0.3.0": {"released": "2024-07-31 08:16:27", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.3.0-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.3.0-py3-none-any.whl", "filehash": "61cc2ef16d37f149a977c9bde5dd46cd28d60b01d3ca1908d554423a82aa8eb0", "filesize": 1609082, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": ">=3.9", "apt_dependencies": [], "pip_dependencies": ["keras", "matplotlib", "numpy", "olga", "pandas", "scikit-learn", "scipy", "seaborn", "tensorflow", "tqdm"]}}}, "0.2.5": {"released": "2024-07-26 13:45:33", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.5-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.5-py3-none-any.whl", "filehash": "6c57a04a21d0669506a3b234975be30e912294e37e5c7aa8342f94d234afb491", "filesize": 1609968, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.2.4": {"released": "2024-07-11 08:45:41", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.4-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.4-py3-none-any.whl", "filehash": "b45c7825f22c527651dcb7c25a200e2db3e76c8a57c888cde2608eae333b9ed4", "filesize": 1609732, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.2.3": {"released": "2024-04-16 10:40:57", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.3-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.3-py3-none-any.whl", "filehash": "148e5d4ce100cf7018bc19cf4feb7746357609764dc20fae58fc62bd4824bc28", "filesize": 1411827, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.2.2": {"released": "2024-04-15 11:28:01", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.2-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.2-py3-none-any.whl", "filehash": "36659e5a0e1c37f6531935673f5a447dbf2f3ff931ad2b5709f21cefa8dd3eef", "filesize": 1429574, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.2.1": {"released": "2024-04-15 09:30:50", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.1-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.1-py3-none-any.whl", "filehash": "6ca7c28e624e3c4b18ede3b8d1b3b607076a4dadddb0c1b736b414f5175bcd8c", "filesize": 83874, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.2.0": {"released": "2024-04-04 14:57:10", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.2.0-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.2.0-py3-none-any.whl", "filehash": "e7d9ee9accf617fb612c9cb143cf41e1d81bc29ba40c34a6b364a309718df202", "filesize": 84424, "builder_abi": "cp311", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "tensorflow", "tqdm"]}}}, "0.1.5": {"released": "2022-05-24 17:47:15", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.5-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.5-py3-none-any.whl", "filehash": "3d4c87a4bcb1744ac4b6a83556d86e556c39b4ead38f604ce2de6ca7ca0b443d", "filesize": 64836, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.1.4": {"released": "2022-03-25 17:43:11", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.4-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.4-py3-none-any.whl", "filehash": "eac24cfc06de55f702d38a65fca21e53ca12d767886369621792272399009aff", "filesize": 64812, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.1.3": {"released": "2022-03-15 22:51:05", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.3-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.3-py3-none-any.whl", "filehash": "fda82edfeba3660ac150cad9fb5ac6ac24802a0513e4c3f5e8e37d990a8ef23d", "filesize": 64812, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.1.2": {"released": "2022-03-08 16:35:46", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.2-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.2-py3-none-any.whl", "filehash": "12af95d14d5033c44eb8e1f678f26e72615315cbbe94eeeb32f9dff9ad396d90", "filesize": 64815, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.1.1": {"released": "2022-03-08 16:27:26", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.1-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.1-py3-none-any.whl", "filehash": "892ade639bd13f96837bc1c3a22bc1c30337fbb6b89902fc56025ec93904faff", "filesize": 64813, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.1.0": {"released": "2022-03-08 15:18:41", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.1.0-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.1.0-py3-none-any.whl", "filehash": "eab5bd9c41328616fbe26cfe69c35638f43152cfa8d7128401b21f0d6039bce7", "filesize": 64806, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.9": {"released": "2021-12-23 12:32:13", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.9-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.9-py3-none-any.whl", "filehash": "95564182121915301d912a188f40d967343969b57dbb8934109dfa54a6d43236", "filesize": 64744, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.8": {"released": "2021-07-06 15:00:28", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.8-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.8-py3-none-any.whl", "filehash": "111dff13c4a8622d17e4187338ca365041d97c3693a5f85247b9e4eb2f6eae8d", "filesize": 75614, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.7": {"released": "2021-03-15 12:45:32", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.7-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.7-py3-none-any.whl", "filehash": "4c3d2ad96ea1a8d5bda71192b2ff77a89047ef795a7da09b575022d54c0f9160", "filesize": 75290, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.6": {"released": "2021-03-15 12:02:47", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.6-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.6-py3-none-any.whl", "filehash": "0c5f15e30154c4f9015e3597b7355a1062f3b5be1cf4a16fa80a73366078202b", "filesize": 75272, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.5": {"released": "2021-01-30 09:19:12", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.5-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.5-py3-none-any.whl", "filehash": "1e97537f3fc2f27af4c017199b708bced81ae2950c2a2a35bc35f216392e13df", "filesize": 74910, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.4": {"released": "2021-01-21 09:28:39", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.4-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.4-py3-none-any.whl", "filehash": "2f5f51d4ad5dd983e782190d5c9a9597983634e7b9c3e427b375c3c287dd5fb7", "filesize": 74853, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.3": {"released": "2021-01-05 22:43:41", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.3-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.3-py3-none-any.whl", "filehash": "df1c2e5918a2c2b539a2e509a64a47db930d1f78ad94eceee472a528024d7890", "filesize": 74849, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.2": {"released": "2021-01-05 22:31:24", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.2-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.2-py3-none-any.whl", "filehash": "70bbf1088f0055ee7ab4de8a01529745783d39a95077dca894090ea9e9737c17", "filesize": 74983, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}, "0.0.1": {"released": "2020-12-14 15:10:02", "prerelease": false, "yanked": false, "skip_reason": "", "files": {"sonnia-0.0.1-py3-none-any.whl": {"file_url": "https://archive1.piwheels.org/simple/sonnia/sonnia-0.0.1-py3-none-any.whl", "filehash": "84fc00eda2fd198eca5659f8e9d3d5f78fa333486e659c03bf6bdfead01a286e", "filesize": 71631, "builder_abi": "cp35m", "file_abi_tag": "none", "platform": "any", "requires_python": null, "apt_dependencies": [], "pip_dependencies": ["matplotlib", "numpy", "olga", "sonia", "tensorflow", "tqdm"]}}}}}