sourmash

tools for comparing biological sequences with k-mer sketches

Installation

In a virtualenv (see these instructions if you need to create one):

sudo apt install libstdc++6
pip3 install sourmash

Dependencies

Releases

Version Released Bookworm
Python 3.11
Trixie
Python 3.13
Files
4.9.4 2025-08-07    
4.9.3 2025-06-28    
4.9.2 2025-06-02    
4.9.1 2025-06-02    
4.9.0 2025-05-08    
4.8.14 2025-01-15    
4.8.13 2025-01-11    
4.8.12 2024-12-05    
4.8.11 2024-07-31    
4.8.10 2024-06-29    
4.8.9 2024-06-11    
4.8.8 2024-04-09    
4.8.7 2024-03-21    
4.8.6 2024-02-11    
4.8.5 2023-12-12    
4.8.4 2023-09-15    
4.8.3 2023-08-17    
4.8.2 2023-04-20
4.8.1 2023-04-17
4.8.0 2023-04-06
4.7.0 2023-03-03
4.6.1 2022-12-03    
4.6.0 2022-12-02    
4.5.0 2022-09-07
4.5.0rc1 pre-release 2022-09-07
4.4.3 2022-07-24
4.4.2 2022-07-19
4.4.1 2022-07-09
4.4.0 2022-05-13
4.3.0 2022-03-11
4.2.4 2022-02-05
4.2.3 2021-12-20
4.2.2 2021-08-11
4.2.1 2021-07-17
4.2.0 2021-07-01
4.1.2 2021-06-07
4.1.1 2021-05-22
4.1.0 2021-05-14
4.0.0 2021-03-02
4.0.0rc2 pre-release 2021-03-02
4.0.0rc1 pre-release 2021-02-18
4.0.0a3 pre-release 2020-12-08
4.0.0a2 pre-release 2020-12-08
4.0.0a1 pre-release 2020-11-25
3.5.1 2021-02-16
3.5.0 2020-08-11
3.4.1 2020-07-23
3.4.0 2020-07-14
3.3.1 2020-05-27
3.3.0 2020-05-04
3.2.3 2020-04-21
3.2.2 2020-02-09
3.2.1 2020-02-04
3.2.0 2020-01-27
3.1.0 2020-01-15
3.0.1 2020-01-04
3.0.0 2020-01-03
3.0.0rc1 pre-release 2019-12-27
2.3.1 2019-12-16    
2.3.0 2019-11-22    
2.2.0 2019-09-30    
2.1.0 2019-08-27    
2.0.1 2019-06-06    
2.0.0 2019-03-21    
2.0.0a11 pre-release 2019-01-04    
2.0.0a10 pre-release 2018-10-03    
2.0.0a9 pre-release 2018-07-23    
2.0.0a8 pre-release 2018-06-22    
2.0.0a7 pre-release 2018-06-22    
2.0.0a6 pre-release 2018-06-22    
2.0.0a5 pre-release 2018-06-22    
2.0.0a4 pre-release 2018-06-22    
2.0.0a2 pre-release 2018-06-22    
1.0 2016-09-13    
0.9.6 2016-09-11    
0.9.5 2016-09-11    
0.9.4 2016-07-12    
0.9.4-rc1 pre-release 2016-07-12    
0.9.3 2016-07-10    
0.9.2 2016-06-16    
0.3 2016-06-07    

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Page last updated 2026-09-03 09:19:56 UTC