spats-shape-seq

The Spats package implements a read mapping and reactivity analysis pipeline for calculating SHAPE-Seq reactivities from an input set of next-generation reads.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install spats-shape-seq

Dependencies

  • None

Releases

Version Released Bookworm
Python 3.11
Trixie
Python 3.13
Files
2.0.5 2021-03-30    
2.0.4 2021-01-13    
2.0.3 2020-07-16    
2.0.2 2020-04-03    
2.0.1 2020-03-31    
2.0.0 2020-03-04    
1.9.44 2020-02-12    
1.9.43 2020-02-11    
1.9.42 2020-01-15    
1.9.41 2019-12-06    
1.9.40 2019-11-26    
1.9.39 2019-11-21    
1.9.38 2019-09-10    
1.9.37 2019-09-03    
1.9.36 2019-08-27    
1.9.35 2019-08-05    
1.9.34 2019-07-31    
1.9.33 2019-07-29    
1.9.32 2019-07-22    
1.9.31 2019-07-19    
1.9.30 2019-03-20    
1.9.29 2019-03-13    
1.9.28 2019-03-08    
1.9.27 2019-03-06    
1.9.26 2019-03-05    
1.9.25 2019-02-03    
1.9.24 2019-01-23    
1.9.23 2019-01-10    
1.9.22 2019-01-09    
1.9.21 2018-11-30    
1.9.20 2018-11-14    
1.9.19 2018-09-09    
1.9.18 2018-09-09    
1.9.17 2018-09-06    
1.9.16 2018-09-04    
1.9.15 2018-08-23    
1.9.14 2018-08-08    
1.9.13 2018-07-23    
1.9.12 2018-06-28    
1.9.11 2018-06-28    
1.9.10 2018-06-20    
1.9.9 2018-05-22    
1.9.8 2018-04-27    
1.9.6 2018-03-17    
1.9.5 2018-02-28    
1.9.4 2017-08-30    
1.9.3 2017-08-30    
1.9.1 2017-05-01
1.9.0 2017-05-01    

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Page last updated 2026-09-03 11:55:32 UTC