vsnpdev
USDA APHIS Veterinary Services (VS) Mycobacterium tuberculosis complex, mainly M. bovis, and Brucella sp. SNP pipeline. Genotyping from whole genome sequence (WGS) outputting BAM, VCF, SNP tables and…
Installation
In a virtualenv (see these instructions if you need to create one):
pip3 install vsnpdev
Releases
| Version | Released | Buster Python 3.7 |
Bullseye Python 3.9 |
Bookworm Python 3.11 |
Files |
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| 0.0.21 | 2020-01-30 | ||||
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| 0.0.20 | 2019-07-04 | ||||
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| 0.0.19 | 2019-07-02 | ||||
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| 0.0.18 | 2019-07-02 | ||||
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| 0.0.17 | 2019-06-24 | ||||
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| 0.0.16 | 2019-06-24 | ||||
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| 0.0.15 | 2019-06-24 | ||||
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| 0.0.14 | 2019-06-21 | ||||
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| 0.0.13 | 2019-06-21 | ||||
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| 0.0.12 | 2019-06-21 | ||||
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| 0.0.11 | 2019-06-21 | ||||
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| 0.0.10 | 2019-06-21 | ||||
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| 0.0.9 | 2019-06-21 | ||||
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| 0.0.8 | 2019-06-21 | ||||
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| 0.0.7 | 2019-03-15 | ||||
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| 0.0.4 | 2019-01-31 | ||||
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| 0.0.3 | 2019-01-22 | ||||
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| 0.0.2 | 2019-01-22 | ||||
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| 0.0.1 | 2019-01-22 | ||||
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