piwheels

epicarousel

EpiCarousel: memory- and time-efficient identification of metacells for atlas-level single-cell chromatin accessibility data

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install epicarousel

Dependencies

• memory-profiler
• leidenalg
• shutilwhich
• igraph
• episcanpy
• seaborn
• tqdm
• scanpy
• anndata
• numpy
• scipy
• pandas
• louvain
• snapatac2

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
0.0.8	2024-03-06
epicarousel-0.0.8-py3-none-any.whl (11 KB)
0.0.6	2024-03-04
epicarousel-0.0.6-py3-none-any.whl (11 KB)
0.0.2	2023-08-30
epicarousel-0.0.2-py3-none-any.whl (11 KB)
0.0.1	2023-08-29
epicarousel-0.0.1-py3-none-any.whl (11 KB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue