piwheels

medaka

Neural network sequence error correction.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install medaka

Dependencies

• biopython
• pysam
• keras
• cffi
• h5py
• numpy
• tensorflow
• intervaltree

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
2.1.1	2025-08-19
2.1.0	2025-05-23
2.0.1	2024-10-11
2.0.0	2024-09-11
2.0.0a2 pre-release	2024-08-20
2.0.0a1 pre-release	2024-07-19
1.12.1	2024-07-12
1.12.0	2024-05-20
1.11.3	2023-12-06
1.11.2	2023-11-29
1.11.1	2023-10-24
1.11.0	2023-10-23
1.10.0	2023-10-16
1.9.1	2023-08-15
1.8.2	2023-08-08
1.7.3	2023-02-13
1.6.1	2022-06-20
1.5.0	2021-12-13
1.4.4	2021-09-23
1.3.4	2021-05-19
1.2.6	2021-04-01
1.1.3	2020-10-15
1.0.3	2020-06-10
1.0.0	2020-05-04
0.12.1	2020-04-03
0.11.5	2020-01-24
0.10.1	2019-11-11
0.9.2	2019-09-27
0.8.1	2019-07-29
0.7.1	2019-05-20
0.6.5	2019-05-01
0.5.2	2019-02-07
medaka-0.5.2-py3-none-any.whl (6 MB)
0.4.3	2018-12-21
medaka-0.4.3-py3-none-any.whl (9 MB)
0.4.1	2018-12-14
medaka-0.4.1-py3-none-any.whl (6 MB)

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