piwheels

pubrunner

A framework to rerun text mining tools on the latest publications

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install pubrunner

Dependencies

• pyyaml
• drmaa
• wget
• pyfiglet
• six
• biopython
• gitpython
• snakemake
• pymarc
• bioc
• markdown2
• jsonlines
• ftputil
• future
• requests

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
0.5.5	2020-07-11
pubrunner-0.5.5-py3-none-any.whl (40 KB)
0.5.4	2020-07-10
pubrunner-0.5.4-py3-none-any.whl (40 KB)
0.5.3	2019-08-16
pubrunner-0.5.3-py3-none-any.whl (37 KB)
0.5.2	2018-12-06
pubrunner-0.5.2-py3-none-any.whl (36 KB)
0.5.1	2018-11-06
pubrunner-0.5.1-py3-none-any.whl (36 KB)
0.5.0	2018-11-05
pubrunner-0.5.0-py3-none-any.whl (36 KB)
0.4.1	2018-06-10
pubrunner-0.4.1-py3-none-any.whl (36 KB)
0.4.0	2018-06-10
pubrunner-0.4.0-py3-none-any.whl (36 KB)
0.3.1	2017-12-25
pubrunner-0.3.1-py3-none-any.whl (31 KB)
0.3.0	2017-12-19
pubrunner-0.3.0-py3-none-any.whl (31 KB)
0.2.4	2017-11-03
pubrunner-0.2.4-py3-none-any.whl (30 KB)
0.2.3	2017-11-02
pubrunner-0.2.3-py3-none-any.whl (30 KB)
0.2.2	2017-11-02
pubrunner-0.2.2-py3-none-any.whl (30 KB)
0.2.1	2017-11-02
pubrunner-0.2.1-py3-none-any.whl (24 KB)
0.2.0	2017-11-02
pubrunner-0.2.0-py3-none-any.whl (24 KB)
0.1.4	2017-09-21
pubrunner-0.1.4-py3-none-any.whl (20 KB)
0.1.3	2017-09-21
pubrunner-0.1.3-py3-none-any.whl (20 KB)
0.1.2	2017-09-21
0.1.1	2017-09-21
0.1.0	2017-09-21

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