snakemake

Workflow management system to create reproducible and scalable data analyses

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install snakemake

Releases

Version Released Bullseye
Python 3.9
Bookworm
Python 3.11
Files
9.8.0 2025-07-10
9.7.1 2025-07-04
9.7.0 2025-07-04
9.6.3 2025-07-04
9.6.2 2025-06-24
9.6.1 2025-06-22
9.6.0 2025-06-16
9.5.1 2025-05-23
9.5.0 2025-05-22
9.4.1 2025-05-21
9.4.0 2025-05-15
9.3.5 2025-05-15
9.3.4 2025-05-09
9.3.3 2025-04-29
9.3.2 2025-04-26
9.3.1 2025-04-24
9.3.0 2025-04-16
9.2.0 2025-04-14
9.1.11 2025-04-14
9.1.10 2025-04-11
9.1.9 2025-04-07
9.1.8 2025-04-07
9.1.7 2025-04-04
9.1.6 2025-04-03
9.1.5 2025-04-02
9.1.4 2025-04-01    
9.1.3 2025-03-28    
9.1.2 2025-03-26    
9.1.1 2025-03-21    
9.1.0 2025-03-21    
9.0.1 2025-03-15    
9.0.0 2025-03-14    
8.30.0 2025-03-11    
8.29.3 2025-03-09    
8.29.2 2025-03-05    
8.29.1 2025-03-05    
8.29.0 2025-02-27    
8.28.0 2025-02-12    
8.27.1 2025-01-08    
8.27.0 2025-01-08    
8.26.0 2024-12-23    
8.25.5 2024-11-29    
8.25.4 2024-11-27    
8.25.3 2024-11-11    
8.25.2 2024-11-05    
8.25.1 2024-11-01    
8.25.0 2024-10-29    
8.24.1 2024-10-23    
8.24.0 2024-10-21    
8.23.2 2024-10-18    
8.23.1 2024-10-16    
8.23.0 2024-10-14    
8.22.0 2024-10-13    
8.21.0 2024-10-12    
8.20.7 2024-10-11    
8.20.6 2024-10-07    
8.20.5 2024-09-25    
8.20.4 2024-09-20    
8.20.3 2024-09-09    
8.20.2 2024-09-09    
8.20.1 2024-09-07    
8.20.0 2024-09-07    
8.19.3 2024-09-05    
8.19.2 2024-09-05    
8.19.1 2024-09-04    
8.19.0 2024-08-29    
8.18.2 2024-08-21    
8.18.1 2024-08-19    
8.18.0 2024-08-14    
8.17.0 2024-08-13    
8.16.0 2024-07-09    
8.15.2 2024-07-05    
8.15.1 2024-07-04    
8.15.0 2024-07-04    
8.14.0 2024-06-11    
8.13.0 2024-06-05    
8.12.0 2024-05-27    
8.11.6 2024-05-17    
8.11.5 2024-05-16    
8.11.4 2024-05-11    
8.11.3 2024-05-03    
8.11.2 2024-05-02    
8.11.1 2024-04-29    
8.11.0 2024-04-25    
8.10.8 2024-04-19    
8.10.7 2024-04-12    
8.10.6 2024-04-04    
8.10.5 2024-04-04    
8.10.4 2024-03-27    
8.10.3 2024-03-27    
8.10.2 2024-03-26    
8.10.1 2024-03-26    
8.10.0 2024-03-22    
8.9.0 2024-03-19    
8.8.0 2024-03-15    
8.7.0 2024-03-13    
8.6.0 2024-03-11    
8.5.5 2024-03-07    
8.5.4 2024-03-06    
8.5.3 2024-02-26    
8.5.2 2024-02-24    
8.5.1 2024-02-24    
8.5.0 2024-02-24    
8.4.12 2024-02-20    
8.4.11 2024-02-19    
8.4.10 2024-02-19    
8.4.9 2024-02-18    
8.4.8 2024-02-09    
8.4.7 2024-02-07    
8.4.6 2024-02-06    
8.4.5 2024-02-06    
8.4.4 2024-02-05    
8.4.3 2024-02-02    
8.4.2 2024-01-30    
8.4.1 2024-01-30    
8.4.0 2024-01-29    
8.3.2 2024-01-25    
8.3.1 2024-01-23    
8.3.0 2024-01-23    
8.2.4 2024-01-23    
8.2.3 2024-01-19    
8.2.2 2024-01-19    
8.2.1 2024-01-17    
8.2.0 2024-01-16    
8.1.3 2024-01-15    
8.1.2 2024-01-13    
8.1.1 2024-01-11    
8.1.0 2024-01-08    
8.0.1 2023-12-21    
8.0.0 2023-12-20    
7.32.4 2023-09-18    
7.32.3 2023-08-09  
7.32.2 2023-08-07  
7.32.1 2023-08-05  
7.32.0 2023-08-03  
7.31.1 2023-08-02  
7.31.0 2023-07-26  
7.30.2 2023-07-21  
7.30.1 2023-06-28  
7.30.0 2023-06-28  
7.29.0 2023-06-22  
7.28.3 2023-06-16  
7.28.2 2023-06-13  
7.28.1 2023-06-11  
7.28.0 2023-06-11  
7.26.0 2023-05-22  
7.25.4 2023-05-12  
7.25.3 2023-05-04  
7.25.2 2023-04-28  
7.25.1 2023-04-28  
7.25.0 2023-03-23  
7.24.2 2023-03-14  
7.24.1 2023-03-09  
7.24.0 2023-03-01  
7.23.1 2023-02-19  
7.23.0 2023-02-18  
7.22.0 2023-02-12  
7.21.0 2023-02-03  
7.20.0 2023-01-18  
7.19.1 2022-12-13  
7.19.0 2022-12-13  
7.18.2 2022-11-10  
7.18.1 2022-11-03  
7.18.0 2022-10-31  
7.17.1 2022-10-28  
7.17.0 2022-10-27  
7.16.2 2022-10-26  
7.16.1 2022-10-18  
7.16.0 2022-10-14  
7.15.2 2022-10-08  
7.15.1 2022-10-04  
7.15.0 2022-10-04  
7.14.2 2022-09-27  
7.14.1 2022-09-26  
7.14.0 2022-08-29  
7.13.0 2022-08-25  
7.12.1 2022-08-10  
7.12.0 2022-07-29    
7.11.0 2022-07-27    
7.10.0 2022-07-26    
7.9.0 2022-07-19    
7.8.5 2022-06-30    
7.8.3 2022-06-20  
7.8.2 2022-06-08  
7.8.1 2022-05-31  
7.8.0 2022-05-24  
7.7.0 2022-05-16  
7.6.2 2022-05-06  
7.6.1 2022-05-04  
7.6.0 2022-05-03  
7.5.0 2022-04-26  
7.4.0 2022-04-22  
7.3.8 2022-04-06  
7.3.7 2022-04-05  
7.3.6 2022-04-02  
7.3.5 2022-03-31  
7.3.4 2022-03-30  
7.3.3 2022-03-28  
7.3.2 2022-03-25  
7.3.1 2022-03-23  
7.3.0 2022-03-21  
7.2.1 2022-03-14  
7.2.0 2022-03-13  
7.1.1 2022-03-07  
7.1.0 2022-03-04  
7.0.4 2022-03-03  
7.0.3 2022-03-02  
7.0.2 2022-03-02  
7.0.1 2022-02-26  
7.0.0 2022-02-23  
6.15.5 2022-02-09  
6.15.4 2022-02-09  
6.15.3 2022-02-07  
6.15.2 2022-02-05  
6.15.1 2022-01-31  
6.15.0 2022-01-29  
6.14.0 2022-01-26  
6.13.1 2022-01-11  
6.13.0 2022-01-10  
6.12.3 2021-12-09  
6.12.2 2021-12-08  
6.12.1 2021-11-29  
6.12.0 2021-11-29  
6.11.1 2021-11-26  
6.11.0 2021-11-25  
6.10.0 2021-10-21  
6.9.1 2021-09-30  
6.9.0 2021-09-29  
6.8.2 2021-09-29  
6.8.1 2021-09-24  
6.8.0 2021-09-06  
6.7.0 2021-08-12  
6.6.1 2021-07-19  
6.6.0 2021-07-16  
6.5.5 2021-07-16  
6.5.3 2021-07-06  
6.5.2 2021-07-02  
6.5.1 2021-06-24  
6.5.0 2021-06-22  
6.4.1 2021-05-27  
6.4.0 2021-05-20  
6.3.0 2021-04-29  
6.2.1 2021-04-22  
6.2.0 2021-04-22  
6.1.2 2021-04-20  
6.1.1 2021-04-07  
6.1.0 2021-04-01  
6.0.5 2021-03-11  
6.0.4 2021-03-11  
6.0.3 2021-03-08  
6.0.2 2021-03-03  
6.0.1 2021-03-03  
6.0.0 2021-02-26  
5.32.2 2021-02-11  
5.32.1 2021-02-08  
5.32.0 2021-01-15  
5.31.1 2020-12-21  
5.31.0 2020-12-21  
5.30.2 2020-12-16  
5.30.1 2020-11-23  
5.30.0 2020-11-23  
5.29.0 2020-11-19  
5.28.0 2020-11-12  
5.27.4 2020-11-03  
5.27.3 2020-10-30  
5.27.2 2020-10-30    
5.26.1 2020-10-01  
5.26.0 2020-09-30  
5.25.0 2020-09-18  
5.24.2 2020-09-15  
5.24.1 2020-09-13  
5.24.0 2020-09-09  
5.23.0 2020-08-24  
5.22.1 2020-08-14  
5.22.0 2020-08-13  
5.21.0 2020-08-11  
5.20.1 2020-07-09  
5.20.0 2020-07-08  
5.19.3 2020-06-16  
5.19.2 2020-06-04  
5.19.1 2020-06-03  
5.19.0 2020-06-02  
5.18.1 2020-05-22  
5.18.0 2020-05-21  
5.17.0 2020-05-07  
5.16.0 2020-04-29  
5.15.0 2020-04-21  
5.14.0 2020-04-08  
5.13.0 2020-03-27  
5.12.3 2020-03-24  
5.12.2 2020-03-24  
5.12.1 2020-03-24  
5.12.0 2020-03-24  
5.11.2 2020-03-19  
5.11.1 2020-03-16  
5.11.0 2020-03-16  
5.10.0 2020-01-20  
5.9.1 2019-12-22  
5.9.0 2019-12-20  
5.8.2 2019-12-16  
5.8.1 2019-11-15  
5.8.0 2019-11-15  
5.7.4 2019-10-23  
5.7.1 2019-10-16  
5.7.0 2019-10-07  
5.6.0 2019-09-06  
5.5.4 2019-07-21  
5.5.3 2019-07-11  
5.5.2 2019-06-25  
5.5.1 2019-06-18  
5.5.0 2019-05-31  
5.4.5 2019-04-12  
5.4.4 2019-03-26  
5.4.3 2019-03-11  
5.4.2 2019-02-15  
5.4.1 2019-02-14  
5.4.0 2018-12-19  
5.3.1 2018-12-06  
5.3.0 2018-09-18  
5.2.4 2018-09-10  
5.2.3 2018-09-10  
5.2.2 2018-08-01  
5.2.1 2018-07-23  
5.2.0 2018-07-11  
5.1.5 2018-06-24  
5.1.4 2018-05-29  
5.1.3 2018-05-22  
5.1.2 2018-05-18  
5.1.1 2018-05-17  
5.0.0 2018-05-13  
4.8.1 2018-04-25  
4.8.0 2018-03-13  
4.7.0 2018-02-21  
4.6.0 2018-02-07  
4.5.1 2018-02-01  
4.5.0 2018-01-18  
4.4.0 2017-12-21  
4.3.1 2017-11-16  
4.3.0 2017-10-27  
4.2.0 2017-10-10  
4.1.0 2017-09-26  
4.0.0 2017-07-24  
3.13.3 2017-06-23  
3.13.2 2017-06-20  
3.13.1 2017-06-20  
3.13.0 2017-06-12  
3.12.0 2017-05-09  
3.11.2 2017-03-15  
3.11.1 2017-03-14  
3.11.0 2017-03-08  
3.10.2 2017-02-28  
3.10.1 2017-01-30  
3.10.0 2017-01-18  
3.9.1 2016-12-23  
3.9.0 2016-11-15  
3.8.2 2016-09-23  
3.8.1 2016-09-14  
3.8.0 2016-08-26  
3.7.1 2016-05-16  
3.7.0 2016-05-05  
3.6.1 2016-04-08  
3.6.0 2016-03-10  
3.5.5 2016-01-23  
3.5.4 2015-12-04  
3.5.3 2015-11-24  
3.5.2 2015-11-19  
3.5.1 2015-11-18  
3.5.0 2015-11-18  
3.4.2 2015-09-12  
3.4.1 2015-08-05  
3.4 2015-07-18  
3.3 2015-05-14  
3.2.2 2015-03-25  
3.2.1 2015-01-22  
3.2 2015-01-09  
3.1.1 2014-09-24  
3.1 2014-08-27  
3.0 2014-07-03  
3.0b1 pre-release 2014-06-08  
2.5.2.2 2014-04-04  
2.5.2.1 2014-04-03  
2.5.2 2014-04-02  
2.5.1 2014-03-09  
2.5 2014-02-01  
2.4.9 2013-12-21  
2.4.8 2013-12-05  
2.4.7.1 2013-10-14  
2.4.7 2013-10-13  
2.4.6 2013-09-25  
2.4.5 2013-08-31  
2.4.4 2013-07-01  
2.4.3 2013-06-17  
2.4.2 2013-06-17  
2.4.1 2013-06-17  
2.4 2013-06-17  
2.3 2013-03-26  
2.2.2 2013-02-19  
2.2.1 2013-02-19  
2.2 2013-02-18  
2.1.1 2013-01-02  
2.1 2013-01-02  
2.0 2012-11-24  
1.2.3 2012-09-24  
1.2.1 2012-07-25  
1.2 2012-06-27  
1.1.4 2012-06-11  
1.1.3 2012-06-06  
1.1.2 2012-05-15  
1.1.1 2012-05-14  
1.1 2012-05-14  
1.0.2 2012-04-15  
1.0.1 2012-04-09  
1.0 2012-04-09  

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Page last updated 2025-07-17 19:13:18 UTC