piwheels

scbamtools

High performance Cython + Python tools to process BAM files with tags as they arise in single-cell sequencing

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install scbamtools

Dependencies

• ncls
• cython
• numpy
• cutadapt
• mrfifo

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.8.3	2025-04-14
scbamtools-0.8.3-cp39-cp39-linux_armv6l.whl (1 MB) scbamtools-0.8.3-cp39-cp39-linux_armv7l.whl (1 MB) scbamtools-0.8.3-cp311-cp311-linux_armv6l.whl (1 MB) scbamtools-0.8.3-cp311-cp311-linux_armv7l.whl (1 MB)
0.8.2	2025-04-12
scbamtools-0.8.2-cp39-cp39-linux_armv6l.whl (1 MB) scbamtools-0.8.2-cp39-cp39-linux_armv7l.whl (1 MB) scbamtools-0.8.2-cp311-cp311-linux_armv6l.whl (1 MB) scbamtools-0.8.2-cp311-cp311-linux_armv7l.whl (1 MB)
0.8.1	2025-03-31
scbamtools-0.8.1-cp311-cp311-linux_armv6l.whl (1 MB) scbamtools-0.8.1-cp311-cp311-linux_armv7l.whl (1 MB) scbamtools-0.8.1-cp39-cp39-linux_armv6l.whl (1 MB) scbamtools-0.8.1-cp39-cp39-linux_armv7l.whl (1 MB) scbamtools-0.8.1-cp313-cp313-linux_armv6l.whl (1 MB) scbamtools-0.8.1-cp313-cp313-linux_armv7l.whl (1 MB)
0.6	2024-05-21
scbamtools-0.6-cp311-cp311-linux_armv6l.whl (1 MB) scbamtools-0.6-cp311-cp311-linux_armv7l.whl (1 MB) scbamtools-0.6-cp39-cp39-linux_armv6l.whl (1 MB) scbamtools-0.6-cp39-cp39-linux_armv7l.whl (1 MB) scbamtools-0.6-cp313-cp313-linux_armv6l.whl (1 MB) scbamtools-0.6-cp313-cp313-linux_armv7l.whl (1 MB)
0.5	2024-03-14
scbamtools-0.5-cp311-cp311-linux_armv6l.whl (1 MB) scbamtools-0.5-cp311-cp311-linux_armv7l.whl (1 MB) scbamtools-0.5-cp39-cp39-linux_armv6l.whl (1 MB) scbamtools-0.5-cp39-cp39-linux_armv7l.whl (1 MB) scbamtools-0.5-cp313-cp313-linux_armv6l.whl (1 MB) scbamtools-0.5-cp313-cp313-linux_armv7l.whl (1 MB)
0.2	2024-03-11
0.1	2024-03-11

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