piwheels

scvi-tools

Deep probabilistic analysis of single-cell omics data.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install scvi-tools

Dependencies

• rich
• sparse
• lightning
• scipy
• torchmetrics
• tqdm
• anndata
• mudata
• docrep
• ml-collections
• xarray
• tensorboard
• torch
• scikit-learn
• numpy
• numba
• pyro-ppl
• pandas
• scanpy

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
1.4.0.post1	2025-10-20
1.4.0	2025-09-14
scvi_tools-1.4.0-py3-none-any.whl (613 KB)
1.3.3	2025-07-23
scvi_tools-1.3.3-py3-none-any.whl (547 KB)
1.3.2	2025-06-26
scvi_tools-1.3.2-py3-none-any.whl (547 KB)
1.3.1.post1	2025-05-15
scvi_tools-1.3.1.post1-py3-none-any.whl (523 KB)
1.3.1	2025-05-15
scvi_tools-1.3.1-py3-none-any.whl (523 KB)
1.3.0	2025-02-27
scvi_tools-1.3.0-py3-none-any.whl (491 KB)
1.2.2.post2	2025-01-08
scvi_tools-1.2.2.post2-py3-none-any.whl (449 KB)
1.2.2.post1	2025-01-01
scvi_tools-1.2.2.post1-py3-none-any.whl (449 KB)
1.2.2	2024-12-31
scvi_tools-1.2.2-py3-none-any.whl (448 KB)
1.2.1	2024-12-04
scvi_tools-1.2.1-py3-none-any.whl (428 KB)
1.2.0	2024-09-26
scvi_tools-1.2.0-py3-none-any.whl (417 KB)
1.1.6.post2	2024-09-16
scvi_tools-1.1.6.post2-py3-none-any.whl (379 KB)
1.1.6.post1	2024-09-15
scvi_tools-1.1.6.post1-py3-none-any.whl (379 KB)
1.1.6	2024-08-19
scvi_tools-1.1.6-py3-none-any.whl (379 KB)
1.1.5	2024-06-30
scvi_tools-1.1.5-py3-none-any.whl (379 KB)
1.1.4	2024-06-30
scvi_tools-1.1.4-py3-none-any.whl (413 KB)
1.1.3	2024-06-26
scvi_tools-1.1.3-py3-none-any.whl (379 KB)
1.1.2	2024-03-01
scvi_tools-1.1.2-py3-none-any.whl (371 KB)
1.1.1	2024-02-19
scvi_tools-1.1.1-py3-none-any.whl (371 KB)
1.1.0.post2	2024-02-13
scvi_tools-1.1.0.post2-py3-none-any.whl (371 KB)
1.1.0.post1	2024-02-13
scvi_tools-1.1.0.post1-py3-none-any.whl (371 KB)
1.1.0rc2 pre-release	2024-01-18
scvi_tools-1.1.0rc2-py3-none-any.whl (371 KB)
1.1.0rc1 pre-release	2023-12-07
scvi_tools-1.1.0rc1-py3-none-any.whl (369 KB)
1.0.4	2023-10-13
scvi_tools-1.0.4-py3-none-any.whl (343 KB)
1.0.3	2023-08-14
scvi_tools-1.0.3-py3-none-any.whl (343 KB)
1.0.2	2023-07-05
scvi_tools-1.0.2-py3-none-any.whl (343 KB)
1.0.1	2023-07-04
scvi_tools-1.0.1-py3-none-any.whl (343 KB)
1.0.0	2023-06-02
scvi_tools-1.0.0-py3-none-any.whl (343 KB)
1.0.0b0 pre-release	2023-05-17
scvi_tools-1.0.0b0-py3-none-any.whl (336 KB)
0.20.3	2023-03-21
scvi_tools-0.20.3-py3-none-any.whl (323 KB)
0.20.2	2023-03-10
scvi_tools-0.20.2-py3-none-any.whl (323 KB)
0.20.1	2023-02-21
scvi_tools-0.20.1-py3-none-any.whl (322 KB)
0.20.0	2023-02-01
scvi_tools-0.20.0-py3-none-any.whl (322 KB)
0.20.0b2 pre-release	2023-02-01
scvi_tools-0.20.0b2-py3-none-any.whl (322 KB)
0.20.0b1 pre-release	2023-01-23
scvi_tools-0.20.0b1-py3-none-any.whl (320 KB)
0.20.0b0 pre-release	2023-01-20
scvi_tools-0.20.0b0-py3-none-any.whl (320 KB)
0.20.0a0 pre-release	2023-01-10
scvi_tools-0.20.0a0-py3-none-any.whl (315 KB)
0.19.0	2022-10-31
scvi_tools-0.19.0-py3-none-any.whl (289 KB)
0.19.0a0 pre-release	2022-10-20
scvi_tools-0.19.0a0-py3-none-any.whl (289 KB)
0.18.0	2022-10-12
scvi_tools-0.18.0-py3-none-any.whl (283 KB)
0.17.4	2022-09-20
scvi_tools-0.17.4-py3-none-any.whl (266 KB)
0.17.3	2022-08-26
scvi_tools-0.17.3-py3-none-any.whl (265 KB)
0.17.2	2022-08-25
scvi_tools-0.17.2-py3-none-any.whl (265 KB)
0.17.1	2022-07-15
scvi_tools-0.17.1-py3-none-any.whl (265 KB)
0.17.0	2022-07-14
scvi_tools-0.17.0-py3-none-any.whl (265 KB)
0.17.0b0 pre-release	2022-06-25
scvi_tools-0.17.0b0-py3-none-any.whl (264 KB)
0.16.4	2022-06-14
scvi_tools-0.16.4-py3-none-any.whl (256 KB)
0.16.3 yanked	2022-06-04
scvi_tools-0.16.3-py3-none-any.whl (257 KB)
0.16.2 yanked	2022-05-10
scvi_tools-0.16.2-py3-none-any.whl (256 KB)
0.16.1	2022-04-22
scvi_tools-0.16.1-py3-none-any.whl (256 KB)
0.16.0	2022-04-12
scvi_tools-0.16.0-py3-none-any.whl (256 KB)
0.15.5	2022-04-07
scvi_tools-0.15.5-py3-none-any.whl (255 KB)
0.15.4	2022-03-28
scvi_tools-0.15.4-py3-none-any.whl (255 KB)
0.15.3	2022-03-25
scvi_tools-0.15.3-py3-none-any.whl (255 KB)
0.15.2	2022-03-15
scvi_tools-0.15.2-py3-none-any.whl (254 KB)
0.15.1	2022-03-11
scvi_tools-0.15.1-py3-none-any.whl (253 KB)
0.15.0	2022-02-28
scvi_tools-0.15.0-py3-none-any.whl (252 KB)
0.15.0b0 pre-release	2022-02-23
scvi_tools-0.15.0b0-py3-none-any.whl (244 KB)
0.15.0a0 pre-release	2022-02-11
scvi_tools-0.15.0a0-py3-none-any.whl (244 KB)
0.14.6	2022-02-06
scvi_tools-0.14.6-py3-none-any.whl (227 KB)
0.14.5	2021-11-23
scvi_tools-0.14.5-py3-none-any.whl (226 KB)
0.14.4	2021-11-17
scvi_tools-0.14.4-py3-none-any.whl (226 KB)
0.14.3	2021-10-22
scvi_tools-0.14.3-py3-none-any.whl (226 KB)
0.14.2	2021-10-18
scvi_tools-0.14.2-py3-none-any.whl (226 KB)
0.14.1	2021-10-12
scvi_tools-0.14.1-py3-none-any.whl (226 KB)
0.14.0	2021-10-07
scvi_tools-0.14.0-py3-none-any.whl (226 KB)
0.13.0	2021-08-23
scvi_tools-0.13.0-py3-none-any.whl (213 KB)
0.12.2	2021-08-11
scvi_tools-0.12.2-py3-none-any.whl (200 KB)
0.12.1	2021-07-29
scvi_tools-0.12.1-py3-none-any.whl (200 KB)
0.12.0	2021-07-15
scvi_tools-0.12.0-py3-none-any.whl (200 KB)
0.11.0	2021-05-24
scvi_tools-0.11.0-py3-none-any.whl (194 KB)
0.10.1	2021-05-04
scvi_tools-0.10.1-py3-none-any.whl (192 KB)
0.10.0	2021-04-20
scvi_tools-0.10.0-py3-none-any.whl (191 KB)
0.9.1	2021-03-20
scvi_tools-0.9.1-py3-none-any.whl (179 KB)
0.9.0	2021-03-04
scvi_tools-0.9.0-py3-none-any.whl (179 KB)
0.9.0b1 pre-release	2021-02-24
scvi_tools-0.9.0b1-py3-none-any.whl (170 KB)
0.9.0b0 pre-release	2021-02-23
scvi_tools-0.9.0b0-py3-none-any.whl (170 KB)
0.9.0a2 pre-release	2021-02-05
scvi_tools-0.9.0a2-py3-none-any.whl (161 KB)
0.9.0a1 pre-release	2021-01-28
scvi_tools-0.9.0a1-py3-none-any.whl (159 KB)
0.9.0a0 pre-release	2021-01-25
scvi_tools-0.9.0a0-py3-none-any.whl (151 KB)
0.8.1	2020-12-24
scvi_tools-0.8.1-py3-none-any.whl (146 KB)
0.8.0	2020-12-17
scvi_tools-0.8.0-py3-none-any.whl (146 KB)
0.8.0b0 pre-release	2020-11-12
scvi_tools-0.8.0b0-py3-none-any.whl (158 KB)
0.7.1	2020-10-20
scvi_tools-0.7.1-py3-none-any.whl (154 KB)
0.7.0	2020-10-14
scvi_tools-0.7.0-py3-none-any.whl (152 KB)
0.7.0b0 pre-release	2020-09-28
scvi_tools-0.7.0b0-py3-none-any.whl (148 KB)
0.7.0a6 pre-release	2020-09-25
scvi_tools-0.7.0a6-py3-none-any.whl (147 KB)
0.7.0a5 pre-release	2020-09-22
scvi_tools-0.7.0a5-py3-none-any.whl (146 KB)
0.7.0a4 pre-release	2020-09-18
scvi_tools-0.7.0a4-py3-none-any.whl (145 KB)
0.7.0a3 pre-release	2020-09-17
scvi_tools-0.7.0a3-py3-none-any.whl (145 KB)
0.7.0a2 pre-release	2020-09-17
scvi_tools-0.7.0a2-py3-none-any.whl (145 KB)
0.7.0a1 pre-release	2020-09-17
scvi_tools-0.7.0a1-py3-none-any.whl (145 KB)
0.7.0a0 pre-release	2020-09-17
scvi_tools-0.7.0a0-py3-none-any.whl (145 KB)

Issues with this package?

• Search issues for this package
• Package or version missing? Open a new issue
• Something else? Open a new issue