piwheels

homi-pipeline

Pipeline for analysis of host-microbiome dual transcriptome data

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install homi-pipeline

Dependencies

• biopython
• cookiecutter
• pyyaml
• snakemake
• numpy
• pandas
• pulp
• argparse

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
1.0.13	2025-12-06
homi_pipeline-1.0.13-py3-none-any.whl (71 KB)
1.0.12	2024-11-21
homi_pipeline-1.0.12-py3-none-any.whl (71 KB)
1.0.11	2024-11-15
homi_pipeline-1.0.11-py3-none-any.whl (71 KB)
1.0.10	2024-10-18
homi_pipeline-1.0.10-py3-none-any.whl (71 KB)
1.0.9	2024-10-18
homi_pipeline-1.0.9-py3-none-any.whl (70 KB)
1.0.8	2024-10-04
HoMi_pipeline-1.0.8-py3-none-any.whl (17 KB)
1.0.7	2024-10-04
HoMi_pipeline-1.0.7-py3-none-any.whl (17 KB)
1.0.6	2024-10-03
HoMi_pipeline-1.0.6-py3-none-any.whl (17 KB)
1.0.5	2024-10-03
HoMi_pipeline-1.0.5-py3-none-any.whl (17 KB)
1.0.4	2024-10-03
HoMi_pipeline-1.0.4-py3-none-any.whl (17 KB)

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