piwheels

scSLAT

A graph deep learning based tool to align single cell spatial omics data

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install scslat

Dependencies

• harmony-pytorch
• torch-geometric
• matplotlib
• scanpy
• pynvml
• scipy
• torchaudio
• harmonypy
• plotly
• torchvision
• faiss-cpu
• scikit-misc
• torch
• numpy
• joblib
• packaging
• pyyaml
• leidenalg
• opencv-python
• kaleido
• seaborn
• scikit-learn
• anndata
• h5py
• pandas

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
0.3.0	2024-12-20
scslat-0.3.0-py3-none-any.whl (36 KB)
0.2.1	2023-04-17
scslat-0.2.1-py3-none-any.whl (33 KB)
0.2.0	2023-01-25
scslat-0.2.0-py3-none-any.whl (33 KB)

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