scUNAGI
UNAGI: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases
Installation
In a virtualenv (see these instructions if you need to create one):
pip3 install scunagi
Dependencies
- jaxlib
- pyro-ppl
- scipy
- leidenalg
- pycparser
- pygments
- pyparsing
- scikit-learn
- seaborn
- sympy
- python-dateutil
- igraph
- numba
- six
- pillow
- torchvision
- setuptools
- h5py
- lightning
- numpyro
- sphinx
- pysocks
- stack-data
- numpy
- pip
- ptyprocess
- torch
- requests
- threadpoolctl
- pure-eval
- scvi-tools
- parso
- networkx
- recommonmark
- python-igraph
- tqdm
- idna
- pyopenssl
- pynndescent
- typing-extensions
- tzdata
- stdlib-list
- psutil
- scanpy
- statsmodels
- traitlets
- umap-learn
- pyzmq
- torchaudio
- wheel
- tbb
- pytz
- pandas
- texttable
- tornado
- wcwidth
- jax
- anndata
Releases
| Version | Released | Bullseye Python 3.9 |
Bookworm Python 3.11 |
Trixie Python 3.13 |
Files |
|---|---|---|---|---|---|
| 0.5.10 | 2025-11-11 | ||||
| 0.5.7 | 2025-11-08 | ||||
| 0.5.6 | 2025-11-08 | ||||
| 0.5.5 | 2025-11-07 | ||||
| 0.5.4 | 2025-11-07 | ||||
| 0.5.3 | 2025-11-02 | ||||
| 0.5.1 | 2024-12-03 | ||||
| 0.5.0 | 2024-12-03 | ||||
| 0.4.0 | 2024-07-02 | ||||
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| 0.3.0 | 2024-06-21 | ||||
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| 0.2.3 | 2024-01-23 | ||||
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| 0.2.2 | 2023-12-27 | ||||
| 0.2 | 2023-12-11 | ||||
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| 0.1.1 | 2024-01-23 | ||||
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| 0.1 | 2023-12-11 | ||||
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